Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716709

Identifier: 119716709

GI number: 119716709

Start: 2650433

End: 2651617

Strand: Direct

Name: 119716709

Synonym: Noca_2483

Alternate gene names: NA

Gene position: 2650433-2651617 (Clockwise)

Preceding gene: 119716708

Following gene: 119716710

Centisome position: 53.16

GC content: 75.78

Gene sequence:

>1185_bases
ATGGACGCGGTCATGAGGATGCCCGTACGACAACGCCCGACGGCCGGCCGCCCCGGCGTCGTCGGCACCGCTCGCGTCGA
CCGTCGGATCCGCGCCCTGCTGCCGCGGCTGCACGCCGGCGACGTGGCCGTGCTCGACCACGCCGACCTCGACCGGACGA
CCGCCCAGGCCCTGGTGGACGCCGGTGTCGTCGCCGTCGTCAACGCCGCGCCGATGATCTCCGGTCGCTACCCGAGCCTC
GGCCCCGAGGTGCTGGCCACCGCGGGGATCGTGATCGTCGACCGGGTGGGCAGCACCGGCCTGGCCGCCATCACCGACGG
CGAAGTGGTCCGGGTCGACGGAGGATCGGTCCTCGTGGCGGACCGGCCGGTCGCCGTCGGCCGGCAGGTGGACGGCGAGA
CCGTTGCCCGGGAGCTCACGTCGGCCCGGGAGGGCCTGACCGCGCACCTCGAGACGTTCACCCACAACACCACCGAGTTC
CTGCGGCGCGAGCAGGACCTGCTCCTGCACGGCCTCGGGGTGCCCCGGCTGGCGACCCGGGTGGCGGGCCAGCCGGTCGT
CGTGGTCGCAGCCGGGCACGAGCACGCCCGCGAGCTGGCACTGGTCCGCACCTTCGTGCGCGAGCAGCAGCCGGTCCTCG
TGGCGGTCGGCCGCGGCGCCGACGTGCTGCGTGCGGCGGGCCTGCGCGCGGACGTGGTGGTGCTCGACGCCGGGGCCGAC
GACGGCGATACCCCGGCCGCGAAGGCGCTCAAGGCCGCCCGCGACGTGGTCGTGCGCACCGACCGTGGCGCCGGCCGCTC
CGCGGTCGACCAGCTCGAGCGTCTCGGGGTGCGGCCGCTGCGCTTCGAGTCGGGCGCGACCCCCGAGGACGCCGCGCTGC
TGCTGGTGGCCGCGGCCGATGCGGCGCTGATCGTCGGGGTCGGACTGCGAGCCAGCCTCGAGGAGCTCCTGGACAGCCAG
CGCGCCGGCTTGGCCAGCACGTACCTGACCCGCCTCAAGGTCGGGCAGCGGCTCGTGGACGCTGCCGCCGTACCCCATCT
GTACGCGGGGCGCGTGCGCCCCCGGCACCTGCTCCTGGTGATGCTCTCCGGGCTGATCGCCCTCGGCGCGGCCGTCGGCG
TCACGCCGGTGGGCCAGGAGTGGGCCGATGCCCTGGCCCAGACCCTGCAAGGACTGCTCCCGTGA

Upstream 100 bases:

>100_bases
CCAGGAGGCCCGGGCGGCCACGAGCTGAGCCCGTGACTCTCCGGCGGCCGACGCGCCCGGAGTCCGACGATGCCGGGGCC
GGCGCGGACCGCCTGGCAGC

Downstream 100 bases:

>100_bases
TCTCCTACCGCCACCACATCGTCTCGCTCGTCGCCGTCTTCTTGGCCCTCGCGGTCGGCGTCGCCCTGGGCGGGGGACCG
CTCTCCGAGCTGGGCCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Anchored Protein; Thiamin Pyrophosphokinase Catalytic Subunit; Pyrophosphokinase; Thiamine Pyrophosphokinase-Like

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MDAVMRMPVRQRPTAGRPGVVGTARVDRRIRALLPRLHAGDVAVLDHADLDRTTAQALVDAGVVAVVNAAPMISGRYPSL
GPEVLATAGIVIVDRVGSTGLAAITDGEVVRVDGGSVLVADRPVAVGRQVDGETVARELTSAREGLTAHLETFTHNTTEF
LRREQDLLLHGLGVPRLATRVAGQPVVVVAAGHEHARELALVRTFVREQQPVLVAVGRGADVLRAAGLRADVVVLDAGAD
DGDTPAAKALKAARDVVVRTDRGAGRSAVDQLERLGVRPLRFESGATPEDAALLLVAAADAALIVGVGLRASLEELLDSQ
RAGLASTYLTRLKVGQRLVDAAAVPHLYAGRVRPRHLLLVMLSGLIALGAAVGVTPVGQEWADALAQTLQGLLP

Sequences:

>Translated_394_residues
MDAVMRMPVRQRPTAGRPGVVGTARVDRRIRALLPRLHAGDVAVLDHADLDRTTAQALVDAGVVAVVNAAPMISGRYPSL
GPEVLATAGIVIVDRVGSTGLAAITDGEVVRVDGGSVLVADRPVAVGRQVDGETVARELTSAREGLTAHLETFTHNTTEF
LRREQDLLLHGLGVPRLATRVAGQPVVVVAAGHEHARELALVRTFVREQQPVLVAVGRGADVLRAAGLRADVVVLDAGAD
DGDTPAAKALKAARDVVVRTDRGAGRSAVDQLERLGVRPLRFESGATPEDAALLLVAAADAALIVGVGLRASLEELLDSQ
RAGLASTYLTRLKVGQRLVDAAAVPHLYAGRVRPRHLLLVMLSGLIALGAAVGVTPVGQEWADALAQTLQGLLP
>Mature_394_residues
MDAVMRMPVRQRPTAGRPGVVGTARVDRRIRALLPRLHAGDVAVLDHADLDRTTAQALVDAGVVAVVNAAPMISGRYPSL
GPEVLATAGIVIVDRVGSTGLAAITDGEVVRVDGGSVLVADRPVAVGRQVDGETVARELTSAREGLTAHLETFTHNTTEF
LRREQDLLLHGLGVPRLATRVAGQPVVVVAAGHEHARELALVRTFVREQQPVLVAVGRGADVLRAAGLRADVVVLDAGAD
DGDTPAAKALKAARDVVVRTDRGAGRSAVDQLERLGVRPLRFESGATPEDAALLLVAAADAALIVGVGLRASLEELLDSQ
RAGLASTYLTRLKVGQRLVDAAAVPHLYAGRVRPRHLLLVMLSGLIALGAAVGVTPVGQEWADALAQTLQGLLP

Specific function: Unknown

COG id: COG4825

COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41120; Mature: 41120

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVMRMPVRQRPTAGRPGVVGTARVDRRIRALLPRLHAGDVAVLDHADLDRTTAQALVD
CCCHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH
AGVVAVVNAAPMISGRYPSLGPEVLATAGIVIVDRVGSTGLAAITDGEVVRVDGGSVLVA
CCHHEEEECCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCEEEEECCCEEEECCCEEEEE
DRPVAVGRQVDGETVARELTSAREGLTAHLETFTHNTTEFLRREQDLLLHGLGVPRLATR
CCCHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
VAGQPVVVVAAGHEHARELALVRTFVREQQPVLVAVGRGADVLRAAGLRADVVVLDAGAD
HCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCEEEEEEECCCC
DGDTPAAKALKAARDVVVRTDRGAGRSAVDQLERLGVRPLRFESGATPEDAALLLVAAAD
CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECC
AALIVGVGLRASLEELLDSQRAGLASTYLTRLKVGQRLVDAAAVPHLYAGRVRPRHLLLV
CEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHH
MLSGLIALGAAVGVTPVGQEWADALAQTLQGLLP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAVMRMPVRQRPTAGRPGVVGTARVDRRIRALLPRLHAGDVAVLDHADLDRTTAQALVD
CCCHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH
AGVVAVVNAAPMISGRYPSLGPEVLATAGIVIVDRVGSTGLAAITDGEVVRVDGGSVLVA
CCHHEEEECCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCEEEEECCCEEEECCCEEEEE
DRPVAVGRQVDGETVARELTSAREGLTAHLETFTHNTTEFLRREQDLLLHGLGVPRLATR
CCCHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
VAGQPVVVVAAGHEHARELALVRTFVREQQPVLVAVGRGADVLRAAGLRADVVVLDAGAD
HCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCEEEEEEECCCC
DGDTPAAKALKAARDVVVRTDRGAGRSAVDQLERLGVRPLRFESGATPEDAALLLVAAAD
CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECC
AALIVGVGLRASLEELLDSQRAGLASTYLTRLKVGQRLVDAAAVPHLYAGRVRPRHLLLV
CEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHH
MLSGLIALGAAVGVTPVGQEWADALAQTLQGLLP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA