| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is merA [H]
Identifier: 119716646
GI number: 119716646
Start: 2577702
End: 2579078
Strand: Direct
Name: merA [H]
Synonym: Noca_2419
Alternate gene names: 119716646
Gene position: 2577702-2579078 (Clockwise)
Preceding gene: 119716645
Following gene: 119716647
Centisome position: 51.7
GC content: 75.16
Gene sequence:
>1377_bases ATGGACGCACACGAGGTGGACCTGGTCGTGATCGGCACCGGCCCCGGCGGCGAGGCGCTCGCCACCGGCGCCGCCCGGGC GGGGCTGCGGGTCGTGGCCGTGGACAGGCACCTGGTCGGCGGGGAGTGCCCCTACTACGGGTGCATCCCCACCAAGATGA TGGTCCGCGGCAGCGATGCGGTCGCCGAGGTCCGGCGGGCCGCCGGCGTCGCCGGCGAGGCCACCATCGCCCCGGCCTGG TCCGTGGTGGCGCGGCGCATCGACGAGGAGGCGACCACCGGCTGGGACGACACGATCGCCGTCGACCGCCTCCGGGATGC CGGGGTGACCTTCCACCACGGGGCGGGCCGGCTCGACGGCCCCGGCCGGGTGCGCGTCGAGGAGCCGGACGGCACGGCGA CGACGTACGCCGCCACGCGGGGCGTGCTGGTCAACCCCGGCACCCGCCCGGCCGTGCCCCCGGTCGACGGCCTGGCGGAC GCGCCGTACTGGACCAACCGCGAAGCGGTGCGGGTCACCGAGCTGCCCGGCTCCCTGGTCGTCCTCGGGGGCGGGCCGAT CGGCTGCGAGCTCGCGCAGGTGTTCTCCCGGTTCGGCGTCCGGGTCGCGGTGGTCCAGCGCGGTCCCCGGCTGCTGCCCG CGGACGAGCCCGAGGCCGCGGAGCTGGTGGCGGAGGTCTTCGCCGAGGAGGGGATCCGGGTGCTCACCGGCGCCGAGGCG ACCCGCGTGGCGTACGACGAGGGCGGCTTCACGATCCGGCTCGACACAGGAGAGCAGCTGAGCGCCGACAAGCTGCTGGT CGCCGCCGGGCGGACCCCCAACCTGGACGACCTCGGCCTGGATACGGTCGGCCTGGACCCGACCGCGCGGACCCTCGAGG TCGACGAGCGCCTGCGGGCGGGGGACCGGCTGTGGGCGATCGGCGACGTGACCGGCAGAGGCGCCTTCACCCACGTCTCG ATGTACCAGTCGGCGATCGCGCTGCGCGACATCCTGGGTGAGCCGGGAGCGCCGGCCCGCTACCACGCGGTGCCACACAC GACGTTCACCGACCCGGAGGTCGGCGGGGTGGGGCTGACCGAGTCCCGGGCCCGGGAATCGGGACTGCGGGTCCGCACGG GCGGCACCGACCTGGCGGGCTCGTCGCGAGGTTTCACCCACGGGCCCGGCGGGCACGGCCTGATCAAGGTCGTCGAGGAC GCGGACCGCGGAGTCCTCGTCGGAGCCACCGCGGTGGGTCCGGCGGGTGGCGAGATCCTCGGCTTCCTGGCCGTCGCGGT CCACGCGGAGGTCCCCGTCGAGACGCTGAGGAACATGATGTACGCCTACCCCACCTTCCACCGGGCCATCGAGTCCGCCA TCGCCGACCTGTCATGA
Upstream 100 bases:
>100_bases GTCGCCGCAGTTCGTCAACGGCATCCTCGGCAGCATCGTGCGCAACAAGCCGTCCCTCGCCTGAGCAGCCGCCGACTGCG CCTGGGCCCATAGTGGACCC
Downstream 100 bases:
>100_bases CAGTGTCGGGAGGGAGCACCGCCCGTCGGGCCGAGGGAGCGGCCCGCGAGGCGCAGCACAGCGAGTGGGTCGATCACGCC GTTCGGGCCGGCCTGGTCGC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MDAHEVDLVVIGTGPGGEALATGAARAGLRVVAVDRHLVGGECPYYGCIPTKMMVRGSDAVAEVRRAAGVAGEATIAPAW SVVARRIDEEATTGWDDTIAVDRLRDAGVTFHHGAGRLDGPGRVRVEEPDGTATTYAATRGVLVNPGTRPAVPPVDGLAD APYWTNREAVRVTELPGSLVVLGGGPIGCELAQVFSRFGVRVAVVQRGPRLLPADEPEAAELVAEVFAEEGIRVLTGAEA TRVAYDEGGFTIRLDTGEQLSADKLLVAAGRTPNLDDLGLDTVGLDPTARTLEVDERLRAGDRLWAIGDVTGRGAFTHVS MYQSAIALRDILGEPGAPARYHAVPHTTFTDPEVGGVGLTESRARESGLRVRTGGTDLAGSSRGFTHGPGGHGLIKVVED ADRGVLVGATAVGPAGGEILGFLAVAVHAEVPVETLRNMMYAYPTFHRAIESAIADLS
Sequences:
>Translated_458_residues MDAHEVDLVVIGTGPGGEALATGAARAGLRVVAVDRHLVGGECPYYGCIPTKMMVRGSDAVAEVRRAAGVAGEATIAPAW SVVARRIDEEATTGWDDTIAVDRLRDAGVTFHHGAGRLDGPGRVRVEEPDGTATTYAATRGVLVNPGTRPAVPPVDGLAD APYWTNREAVRVTELPGSLVVLGGGPIGCELAQVFSRFGVRVAVVQRGPRLLPADEPEAAELVAEVFAEEGIRVLTGAEA TRVAYDEGGFTIRLDTGEQLSADKLLVAAGRTPNLDDLGLDTVGLDPTARTLEVDERLRAGDRLWAIGDVTGRGAFTHVS MYQSAIALRDILGEPGAPARYHAVPHTTFTDPEVGGVGLTESRARESGLRVRTGGTDLAGSSRGFTHGPGGHGLIKVVED ADRGVLVGATAVGPAGGEILGFLAVAVHAEVPVETLRNMMYAYPTFHRAIESAIADLS >Mature_458_residues MDAHEVDLVVIGTGPGGEALATGAARAGLRVVAVDRHLVGGECPYYGCIPTKMMVRGSDAVAEVRRAAGVAGEATIAPAW SVVARRIDEEATTGWDDTIAVDRLRDAGVTFHHGAGRLDGPGRVRVEEPDGTATTYAATRGVLVNPGTRPAVPPVDGLAD APYWTNREAVRVTELPGSLVVLGGGPIGCELAQVFSRFGVRVAVVQRGPRLLPADEPEAAELVAEVFAEEGIRVLTGAEA TRVAYDEGGFTIRLDTGEQLSADKLLVAAGRTPNLDDLGLDTVGLDPTARTLEVDERLRAGDRLWAIGDVTGRGAFTHVS MYQSAIALRDILGEPGAPARYHAVPHTTFTDPEVGGVGLTESRARESGLRVRTGGTDLAGSSRGFTHGPGGHGLIKVVED ADRGVLVGATAVGPAGGEILGFLAVAVHAEVPVETLRNMMYAYPTFHRAIESAIADLS
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=461, Percent_Identity=25.1626898047722, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI50301238, Length=455, Percent_Identity=25.4945054945055, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI148277065, Length=457, Percent_Identity=23.6323851203501, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI148277071, Length=457, Percent_Identity=23.6323851203501, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI33519430, Length=457, Percent_Identity=23.6323851203501, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI33519428, Length=457, Percent_Identity=23.6323851203501, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI33519426, Length=457, Percent_Identity=23.6323851203501, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI291045266, Length=457, Percent_Identity=22.7571115973742, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI22035672, Length=372, Percent_Identity=25.8064516129032, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI87081717, Length=453, Percent_Identity=26.9315673289183, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1786307, Length=481, Percent_Identity=26.6112266112266, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI87082354, Length=466, Percent_Identity=25.3218884120172, Blast_Score=138, Evalue=9e-34, Organism=Escherichia coli, GI1789915, Length=361, Percent_Identity=26.0387811634349, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32565766, Length=465, Percent_Identity=26.2365591397849, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17557007, Length=477, Percent_Identity=24.7379454926625, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI71982272, Length=392, Percent_Identity=26.530612244898, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71983429, Length=355, Percent_Identity=25.6338028169014, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983419, Length=355, Percent_Identity=25.6338028169014, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321091, Length=467, Percent_Identity=26.338329764454, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6325166, Length=473, Percent_Identity=24.5243128964059, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6325240, Length=480, Percent_Identity=22.7083333333333, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI21358499, Length=465, Percent_Identity=26.4516129032258, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24640549, Length=474, Percent_Identity=27.8481012658228, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24640553, Length=474, Percent_Identity=27.8481012658228, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24640551, Length=474, Percent_Identity=27.8481012658228, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI17737741, Length=474, Percent_Identity=26.7932489451477, Blast_Score=99, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 47729; Mature: 47729
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAHEVDLVVIGTGPGGEALATGAARAGLRVVAVDRHLVGGECPYYGCIPTKMMVRGSDA CCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCCCEEEEECCHH VAEVRRAAGVAGEATIAPAWSVVARRIDEEATTGWDDTIAVDRLRDAGVTFHHGAGRLDG HHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCC PGRVRVEEPDGTATTYAATRGVLVNPGTRPAVPPVDGLADAPYWTNREAVRVTELPGSLV CCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE VLGGGPIGCELAQVFSRFGVRVAVVQRGPRLLPADEPEAAELVAEVFAEEGIRVLTGAEA EECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCE TRVAYDEGGFTIRLDTGEQLSADKLLVAAGRTPNLDDLGLDTVGLDPTARTLEVDERLRA EEEEEECCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEEHHHHHCC GDRLWAIGDVTGRGAFTHVSMYQSAIALRDILGEPGAPARYHAVPHTTFTDPEVGGVGLT CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC ESRARESGLRVRTGGTDLAGSSRGFTHGPGGHGLIKVVEDADRGVLVGATAVGPAGGEIL HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHH GFLAVAVHAEVPVETLRNMMYAYPTFHRAIESAIADLS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAHEVDLVVIGTGPGGEALATGAARAGLRVVAVDRHLVGGECPYYGCIPTKMMVRGSDA CCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCCCEEEEECCHH VAEVRRAAGVAGEATIAPAWSVVARRIDEEATTGWDDTIAVDRLRDAGVTFHHGAGRLDG HHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCC PGRVRVEEPDGTATTYAATRGVLVNPGTRPAVPPVDGLADAPYWTNREAVRVTELPGSLV CCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE VLGGGPIGCELAQVFSRFGVRVAVVQRGPRLLPADEPEAAELVAEVFAEEGIRVLTGAEA EECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCE TRVAYDEGGFTIRLDTGEQLSADKLLVAAGRTPNLDDLGLDTVGLDPTARTLEVDERLRA EEEEEECCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEEHHHHHCC GDRLWAIGDVTGRGAFTHVSMYQSAIALRDILGEPGAPARYHAVPHTTFTDPEVGGVGLT CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC ESRARESGLRVRTGGTDLAGSSRGFTHGPGGHGLIKVVEDADRGVLVGATAVGPAGGEIL HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHH GFLAVAVHAEVPVETLRNMMYAYPTFHRAIESAIADLS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2691338; 2265748 [H]