| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is aroK [H]
Identifier: 119716640
GI number: 119716640
Start: 2573458
End: 2574009
Strand: Direct
Name: aroK [H]
Synonym: Noca_2413
Alternate gene names: 119716640
Gene position: 2573458-2574009 (Clockwise)
Preceding gene: 119716639
Following gene: 119716641
Centisome position: 51.62
GC content: 74.28
Gene sequence:
>552_bases GTGACCGGACCCGCACGCCCCCGCGTCGTCCTGGTCGGGCCGATGGGGGCCGGCAAGACCACCGTCGCCCGGCTGCTGGC CGACGCCTGGGGCACCGGGGTCCGGGACACGGACCACGACGTCGAGTCGGCCGAGGGTCGGACCATCTCCGACATCTTCG TGGACTCCGGCGAGGGCGCCTTCCGAGACCTGGAGCGACGAGCGGTCGCGGCCGCGTTGCGCGAGCACGACGGCGTGCTC GCGCTGGGCGGGGGAGCCGTGCTGGACCCTGGGACCCGCGACCTGCTGGCCGGCCACCGGGTCGTGTTCCTGCGGGTCGG CCTCTCCGACGCCGTCAAGCGAGTCGGCCTCGGCGTCGCCCGCCCGCTGCTCCTCGGCAACGTCCGCGGACGGATCAAGG CGCTCCTCGACGAGCGCACCCCCATCTACGAGTCGGTCGCGACCTTGGTCGTGGACACCGACGGCCGCAGCCCCGAGGAT GTCGCCCAGGAGATCCGCGCTGCACTCGACGGGCCTGCGCTCGACGGGTCGGCGCTGGAGGGGGAAGCATGA
Upstream 100 bases:
>100_bases CGCTGGTGCTCGCCGACGCCGTCCTGGAGAAGTTCGGGGGCGACTCGGTGCGCGAGACCCGCCGCAACGCGGAGGGCTAC CTGGACACCCTGAGGTTCCG
Downstream 100 bases:
>100_bases GGGACACCGTCGTCCGGGTGACCGGGGCCGCGCCGTACGACGTCGTCATCGGCCACGACCTGTCCGAGCGGCTGCCGCAG CTGCTCGGGGTCGGGGTGCA
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTGPARPRVVLVGPMGAGKTTVARLLADAWGTGVRDTDHDVESAEGRTISDIFVDSGEGAFRDLERRAVAAALREHDGVL ALGGGAVLDPGTRDLLAGHRVVFLRVGLSDAVKRVGLGVARPLLLGNVRGRIKALLDERTPIYESVATLVVDTDGRSPED VAQEIRAALDGPALDGSALEGEA
Sequences:
>Translated_183_residues MTGPARPRVVLVGPMGAGKTTVARLLADAWGTGVRDTDHDVESAEGRTISDIFVDSGEGAFRDLERRAVAAALREHDGVL ALGGGAVLDPGTRDLLAGHRVVFLRVGLSDAVKRVGLGVARPLLLGNVRGRIKALLDERTPIYESVATLVVDTDGRSPED VAQEIRAALDGPALDGSALEGEA >Mature_182_residues TGPARPRVVLVGPMGAGKTTVARLLADAWGTGVRDTDHDVESAEGRTISDIFVDSGEGAFRDLERRAVAAALREHDGVLA LGGGAVLDPGTRDLLAGHRVVFLRVGLSDAVKRVGLGVARPLLLGNVRGRIKALLDERTPIYESVATLVVDTDGRSPEDV AQEIRAALDGPALDGSALEGEA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=34.9397590361446, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1786587, Length=174, Percent_Identity=32.7586206896552, Blast_Score=70, Evalue=8e-14,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19064; Mature: 18933
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPARPRVVLVGPMGAGKTTVARLLADAWGTGVRDTDHDVESAEGRTISDIFVDSGEGA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEHEEEECCCHH FRDLERRAVAAALREHDGVLALGGGAVLDPGTRDLLAGHRVVFLRVGLSDAVKRVGLGVA HHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHCCCEEEEEEECHHHHHHHHCCHHH RPLLLGNVRGRIKALLDERTPIYESVATLVVDTDGRSPEDVAQEIRAALDGPALDGSALE HHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC GEA CCC >Mature Secondary Structure TGPARPRVVLVGPMGAGKTTVARLLADAWGTGVRDTDHDVESAEGRTISDIFVDSGEGA CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEHEEEECCCHH FRDLERRAVAAALREHDGVLALGGGAVLDPGTRDLLAGHRVVFLRVGLSDAVKRVGLGVA HHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHCCCEEEEEEECHHHHHHHHCCHHH RPLLLGNVRGRIKALLDERTPIYESVATLVVDTDGRSPEDVAQEIRAALDGPALDGSALE HHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC GEA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]