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The map label for this gene is yrrL [H]

Identifier: 119716636

GI number: 119716636

Start: 2569478

End: 2570671

Strand: Direct

Name: yrrL [H]

Synonym: Noca_2409

Alternate gene names: 119716636

Gene position: 2569478-2570671 (Clockwise)

Preceding gene: 119716635

Following gene: 119716637

Centisome position: 51.54

GC content: 69.85

Gene sequence:

>1194_bases
ATGACCGACGAGCACGACGCCGAGTACGACGACCCCCGCGACGACGCTGGGTTGCTCGGCGTCCAGGAGCCGGCGTACGA
AGCAGGCCGCCGGCGCGGCCGCAAGCGACGGAGCCTGCCCGGCTGCCTCGCGGTCCTCCTGGCCCTGGCGATCATCGTGG
GCGGCTTCTACGTCGTGGTCACCTGGGGCATCGACAAGGTGCGCGACCAGTTCGACTCCGCGGAGGACTATCCGGGACCC
GGCCGCGGCAACGTCACCTACCAGGTCGTGAGCGGCGCCACCGCCGGGAGCATCGGGCGTGACCTCAAGGCCGCGGGCGT
GGTCGCCTCGGTCGACGCGTTCGTCCAGGCCGCCAACGCCAGCCCGGACTGGGCCGACCTCCAGGCCGGCTACTTCGCCC
TGAAGAAGCAGATGGCGGCCGCGGACGCGGTCGAGATCCTCGTCGATCCCGCCAACATGGTGAAGGACACCGTGACGATC
CCCGAGGGCCTCCGGGTGGTCGACATCGTGGGCATCCTCGCGAAGAAGACCGACTACCCGAAGGCAGACTTCGAGAAGGT
GCTCGACAACCCGGGCGACCTCGGCCTGCCGTCGTACGCCGAGGGGAACCCCGAGGGCTACCTGTTCCCCGCGACCTACG
ACTTCGGCCCGGACGCGACCCCGGAGTCGATGCTCACCGCCATGGTGACCCGGTGGAAGCAGGCCGCCGAGGACGCCGAC
CTCGAGGCGGCGGCCGCCGAGCTCGGCTACACGCCCGCCGAGCTGATGACGGTCGCCAGCCTGGTCCAGGCAGAGGGGCG
CGGCGACGACATGCCGAAGATCGCGCGGGTGATCTACAACCGGGTCGAGAACCCCGACAACGGGGTGACCAACGGGCTGC
TGCAGGTCGACGCCTCGGTCAACTACGCGCTCGAGCGCTCGACCATCGCCGTGCTGACGCAGGCCGAGATCGACTCGGTC
GCGGACTCGCCGTACAACACCTACACCCAGACCGGGCTCCCGCCGGCGCCCATAGAAGCGCCCGGCGACGACGCGATCGA
GGCGGCCGCCCACCCCGCGGACGGGGACTGGCTGTTCTACGTCACGGTCAACCTGCGCACCGGCGAGACCAAGTTCACTG
AGGACTACCAGGAGTTCCTGGGCTTCAAGCAGGAGCTCCAGGAGTACTGCGACACCCAGTCCGACCGGTGCTGA

Upstream 100 bases:

>100_bases
CGTCGTCGACCAGGCAGCAGCCGTCCTGATCCTGCAGCACGCACTGGACACCGAACGCGCGACGGGGGCCGCGCCGGGCG
AGATCGTCGAGGAGACGTAG

Downstream 100 bases:

>100_bases
GTCCCCGGGACCGGCGGGGTCGGCAGGGTCGGCGATGACGCGCTGCGCCGTCCTCGGCGACCCGATCGCGCACTCGCTGT
CGCCGGTCCTGCACCGGGCC

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTDEHDAEYDDPRDDAGLLGVQEPAYEAGRRRGRKRRSLPGCLAVLLALAIIVGGFYVVVTWGIDKVRDQFDSAEDYPGP
GRGNVTYQVVSGATAGSIGRDLKAAGVVASVDAFVQAANASPDWADLQAGYFALKKQMAAADAVEILVDPANMVKDTVTI
PEGLRVVDIVGILAKKTDYPKADFEKVLDNPGDLGLPSYAEGNPEGYLFPATYDFGPDATPESMLTAMVTRWKQAAEDAD
LEAAAAELGYTPAELMTVASLVQAEGRGDDMPKIARVIYNRVENPDNGVTNGLLQVDASVNYALERSTIAVLTQAEIDSV
ADSPYNTYTQTGLPPAPIEAPGDDAIEAAAHPADGDWLFYVTVNLRTGETKFTEDYQEFLGFKQELQEYCDTQSDRC

Sequences:

>Translated_397_residues
MTDEHDAEYDDPRDDAGLLGVQEPAYEAGRRRGRKRRSLPGCLAVLLALAIIVGGFYVVVTWGIDKVRDQFDSAEDYPGP
GRGNVTYQVVSGATAGSIGRDLKAAGVVASVDAFVQAANASPDWADLQAGYFALKKQMAAADAVEILVDPANMVKDTVTI
PEGLRVVDIVGILAKKTDYPKADFEKVLDNPGDLGLPSYAEGNPEGYLFPATYDFGPDATPESMLTAMVTRWKQAAEDAD
LEAAAAELGYTPAELMTVASLVQAEGRGDDMPKIARVIYNRVENPDNGVTNGLLQVDASVNYALERSTIAVLTQAEIDSV
ADSPYNTYTQTGLPPAPIEAPGDDAIEAAAHPADGDWLFYVTVNLRTGETKFTEDYQEFLGFKQELQEYCDTQSDRC
>Mature_396_residues
TDEHDAEYDDPRDDAGLLGVQEPAYEAGRRRGRKRRSLPGCLAVLLALAIIVGGFYVVVTWGIDKVRDQFDSAEDYPGPG
RGNVTYQVVSGATAGSIGRDLKAAGVVASVDAFVQAANASPDWADLQAGYFALKKQMAAADAVEILVDPANMVKDTVTIP
EGLRVVDIVGILAKKTDYPKADFEKVLDNPGDLGLPSYAEGNPEGYLFPATYDFGPDATPESMLTAMVTRWKQAAEDADL
EAAAAELGYTPAELMTVASLVQAEGRGDDMPKIARVIYNRVENPDNGVTNGLLQVDASVNYALERSTIAVLTQAEIDSVA
DSPYNTYTQTGLPPAPIEAPGDDAIEAAAHPADGDWLFYVTVNLRTGETKFTEDYQEFLGFKQELQEYCDTQSDRC

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=305, Percent_Identity=25.9016393442623, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 42724; Mature: 42593

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEHDAEYDDPRDDAGLLGVQEPAYEAGRRRGRKRRSLPGCLAVLLALAIIVGGFYVVV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCCCCEEE
TWGIDKVRDQFDSAEDYPGPGRGNVTYQVVSGATAGSIGRDLKAAGVVASVDAFVQAANA
ECCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHCCC
SPDWADLQAGYFALKKQMAAADAVEILVDPANMVKDTVTIPEGLRVVDIVGILAKKTDYP
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
KADFEKVLDNPGDLGLPSYAEGNPEGYLFPATYDFGPDATPESMLTAMVTRWKQAAEDAD
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
LEAAAAELGYTPAELMTVASLVQAEGRGDDMPKIARVIYNRVENPDNGVTNGLLQVDASV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
NYALERSTIAVLTQAEIDSVADSPYNTYTQTGLPPAPIEAPGDDAIEAAAHPADGDWLFY
CCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEE
VTVNLRTGETKFTEDYQEFLGFKQELQEYCDTQSDRC
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDEHDAEYDDPRDDAGLLGVQEPAYEAGRRRGRKRRSLPGCLAVLLALAIIVGGFYVVV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCCCCEEE
TWGIDKVRDQFDSAEDYPGPGRGNVTYQVVSGATAGSIGRDLKAAGVVASVDAFVQAANA
ECCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHCCC
SPDWADLQAGYFALKKQMAAADAVEILVDPANMVKDTVTIPEGLRVVDIVGILAKKTDYP
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
KADFEKVLDNPGDLGLPSYAEGNPEGYLFPATYDFGPDATPESMLTAMVTRWKQAAEDAD
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
LEAAAAELGYTPAELMTVASLVQAEGRGDDMPKIARVIYNRVENPDNGVTNGLLQVDASV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
NYALERSTIAVLTQAEIDSVADSPYNTYTQTGLPPAPIEAPGDDAIEAAAHPADGDWLFY
CCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEE
VTVNLRTGETKFTEDYQEFLGFKQELQEYCDTQSDRC
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]