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The map label for this gene is ygaD [C]

Identifier: 119716551

GI number: 119716551

Start: 2480718

End: 2481224

Strand: Direct

Name: ygaD [C]

Synonym: Noca_2324

Alternate gene names: 119716551

Gene position: 2480718-2481224 (Clockwise)

Preceding gene: 119716549

Following gene: 119716552

Centisome position: 49.75

GC content: 73.37

Gene sequence:

>507_bases
GTGGCTAACCTGACCTGCGTGACGGACCTGCTCACCCGCGTGCACCTGCTCCTCCGGGCCGGTGGCCACACGATCGCCAC
CGCAGAGTCCCTGACCGGGGGTCGGCTGGCGGTCGCGCTCACCGACGTGCCGGGCGCCTCCGAGACCTACCTCGGGGGTG
TCGTCACCTACGCCACCGAGATCAAGTCGTCGCTGCTCGACGTCGACGACGCGATCATCGAGCAGCACGGGGTGGTGTCC
GCCGAGTGCGCCCGGGCGATGGCGTCGGGGGTGCGGGCCCTGATGGGGGCGAGCTTCGGCGTCTCCACGACCGGCGTCGC
GGGCCCGACCGAGCAGGAGGGCAAGCCCCCGGGCACGGTGTTCGTCGGGATCGCCGGCCCCGGCCTGGTCGAGGTCGTCG
CCCTGGAGCTGAGCGGCGACCGCGGCCGGATCCAGGGGCGTACCTGCGACGAGGCGTTCGCGGCGTTGGAGGCGGTCCTG
CGGCGGGAAGAAACGCGCCTCGGGTAG

Upstream 100 bases:

>100_bases
AGTCGATCGAGCCGTTCGTCCCCACCAGGGCCCCGGTCTGCCGGTCGCCGACCAGTGCGTAGTCCGCGATCGGTAGCGCC
ATGCCGCGAGGTTAGCCGCC

Downstream 100 bases:

>100_bases
CGTTGTTCGTACGTTCCACGGAGAGGAGAGGCGCATGGTGCTGTTCCGCCGGCTGCTCGGCGACGTGCTCCGCGACCTGC
GGATGCAGCGCGGCCTGACG

Product: competence/damage-inducible protein cinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MANLTCVTDLLTRVHLLLRAGGHTIATAESLTGGRLAVALTDVPGASETYLGGVVTYATEIKSSLLDVDDAIIEQHGVVS
AECARAMASGVRALMGASFGVSTTGVAGPTEQEGKPPGTVFVGIAGPGLVEVVALELSGDRGRIQGRTCDEAFAALEAVL
RREETRLG

Sequences:

>Translated_168_residues
MANLTCVTDLLTRVHLLLRAGGHTIATAESLTGGRLAVALTDVPGASETYLGGVVTYATEIKSSLLDVDDAIIEQHGVVS
AECARAMASGVRALMGASFGVSTTGVAGPTEQEGKPPGTVFVGIAGPGLVEVVALELSGDRGRIQGRTCDEAFAALEAVL
RREETRLG
>Mature_167_residues
ANLTCVTDLLTRVHLLLRAGGHTIATAESLTGGRLAVALTDVPGASETYLGGVVTYATEIKSSLLDVDDAIIEQHGVVSA
ECARAMASGVRALMGASFGVSTTGVAGPTEQEGKPPGTVFVGIAGPGLVEVVALELSGDRGRIQGRTCDEAFAALEAVLR
REETRLG

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=137, Percent_Identity=38.6861313868613, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 17177; Mature: 17046

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLTCVTDLLTRVHLLLRAGGHTIATAESLTGGRLAVALTDVPGASETYLGGVVTYATE
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
IKSSLLDVDDAIIEQHGVVSAECARAMASGVRALMGASFGVSTTGVAGPTEQEGKPPGTV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
FVGIAGPGLVEVVALELSGDRGRIQGRTCDEAFAALEAVLRREETRLG
EEEECCCCEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANLTCVTDLLTRVHLLLRAGGHTIATAESLTGGRLAVALTDVPGASETYLGGVVTYATE
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
IKSSLLDVDDAIIEQHGVVSAECARAMASGVRALMGASFGVSTTGVAGPTEQEGKPPGTV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
FVGIAGPGLVEVVALELSGDRGRIQGRTCDEAFAALEAVLRREETRLG
EEEECCCCEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA