Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is lnt [H]

Identifier: 119716433

GI number: 119716433

Start: 2353002

End: 2354660

Strand: Direct

Name: lnt [H]

Synonym: Noca_2204

Alternate gene names: 119716433

Gene position: 2353002-2354660 (Clockwise)

Preceding gene: 119716432

Following gene: 119716439

Centisome position: 47.19

GC content: 69.8

Gene sequence:

>1659_bases
GTGCCACCCGCGCCCCCGACTTCCGTCTCGGCCCGGTCAGCCTCACCGGACGTGACGGCCCTCTGTCCCGTCTACCAGCC
TCGACGCAGCAGCCGGCTCGCACGACTCGCGGGCGCATCGCTGGCCGGCATCGCCGCTGCAGGAGCCAGCGCTCCGTGGG
AGCAGCGCTGGCTCCTACCGTTGGCGGTCGCTGCGCTGGTGCTCCTGCTTCAGCGAGTGTCCCTGCGCCAAGGGTTCCTC
CTCGGGCTGCTGTTCGGCCTCGGCTACACGCTTGTCCTCACGGTGTGGATGCGGGCAGTCGGCACCGACGCCTGGCTGTT
GATCAGCCCGGTGGTCGCCGCCTACTACGCCCTCGCGGGGGTCGGCATCGCGCTCGTGGGTCGGCTACGCGGCTGGCCGT
GGTGGACCGCCTGCGTGTGGGTGGCGGTCGAGACCGCAATGTCGACCTGGCCTCTCGGCGGCTTCCCGTGGACCCGGTTG
GCGTGGGCCACCGTGGACACCCCGTTCGCCCTGTGGCTGCCCTGGGTCAGCGCCACCGGCGTCAGCTTCCTGGTTGCCCT
AACCGGCGCCACGCTTGCCTGGATGGTCCGTGAGGGCCGAGCCCGCCCCCTTGGAGCGGGTGCGGCCATCGTGGCCGCAC
TTCTGGTCGGCTCCGCGCCCGTCCAGTTCAGGCCCGATTCGTTGACCTCCTCCTGGGAAGCCGGACGGCCGACCGTGACG
GTCGCCGCGGTGCAAGGCGACGTGCCCGGCGCCGGGAACGACCTGGTCGCCGTGCACGAGCAGGTCACCAACAACCACGT
CCAGGCCACCATCAGCCTCGCCCAGCAGGTGCGGTCCGGCGATGTCGAACAGCCCGACTTCGTGTTGTGGCCGGAGAACT
CCACCGCCGTCGACCCGTTCCGCGACGCGCAGACCAACTCAGGGATCTCCCGGGCCGTGTCGGCGATCGGAGTGCCGGTG
CTGGTTGGCGCCATCGTCGACGGCCCTCGTCCGGACGCTGTGCTCAACCAGGGGCTGGTCTGGTTGCCGGACGGCTTGAC
CGAGGTCCGCTACACCAAGCGTCACCCGGTGCCGTTCGGCGAGTACGTGCCATTCCGCAGCCAGCTCTCCGGGCTCAAGA
TCGGGCGTCTGGACATGATCCCGCGCGACATGATCGCCGGCACGCGCACCCAGCCGCTCGACATCGCAGGCACCCGCGTC
GTGGACCTGATCTGCTTCGACGTGGCGTTTGACGACTCCGTCACCGACCAGGTCCAAAACGATGGAGAGATGGTGACTGT
GCAGACCAGCAACGCCACGTTCACCGGGACCGCGCAGCTGCAGCAGCAGTTCACCATCAGCCGGGCTCGGGCCATCGAGA
CCGGCCGCACCGTGGTGGTCGCCTCCACCAATGGCATCAGCGGCGTCATCGGCCCGGACGGCACCGTCCGCGACCGGCTG
GCGCCCCGGACAACCGACATTGCGGTCGCTCAGGTACCCCTGATCGACGCACAGACGCCCGCAGTGCGCTACGGCTCGCT
GATCCGACAAGTCCTGTCGCTGGCAGGTGTCACTGCTGTGATCGCTGCGACCGCAGCGGCCGCCGGACGCAGATTCCCGA
GGCTGCGTCGCCTTGGCGGATGGCCTGCGCGCCGTAGCGAGCGAAAGCTAGGTCCTTGA

Upstream 100 bases:

>100_bases
CTTGGATGCCGACGGCAGGGTCGTGGACCGGGTGATCGGCGAACTCTCCGGCGCGGAGCTCGCCACGCTGTTGGACTCGC
TGGCAGAGCAGGAGTGACCG

Downstream 100 bases:

>100_bases
AGGCAACAGTCCCAATCCCTTCCGGACGGGGCGTCGCGACGAGGTGAGTCGGCGAAGCCTGTCCCTCGCCTCTCACCTAG
ACGGGGCTGTCAGAGGCCGA

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MPPAPPTSVSARSASPDVTALCPVYQPRRSSRLARLAGASLAGIAAAGASAPWEQRWLLPLAVAALVLLLQRVSLRQGFL
LGLLFGLGYTLVLTVWMRAVGTDAWLLISPVVAAYYALAGVGIALVGRLRGWPWWTACVWVAVETAMSTWPLGGFPWTRL
AWATVDTPFALWLPWVSATGVSFLVALTGATLAWMVREGRARPLGAGAAIVAALLVGSAPVQFRPDSLTSSWEAGRPTVT
VAAVQGDVPGAGNDLVAVHEQVTNNHVQATISLAQQVRSGDVEQPDFVLWPENSTAVDPFRDAQTNSGISRAVSAIGVPV
LVGAIVDGPRPDAVLNQGLVWLPDGLTEVRYTKRHPVPFGEYVPFRSQLSGLKIGRLDMIPRDMIAGTRTQPLDIAGTRV
VDLICFDVAFDDSVTDQVQNDGEMVTVQTSNATFTGTAQLQQQFTISRARAIETGRTVVVASTNGISGVIGPDGTVRDRL
APRTTDIAVAQVPLIDAQTPAVRYGSLIRQVLSLAGVTAVIAATAAAAGRRFPRLRRLGGWPARRSERKLGP

Sequences:

>Translated_552_residues
MPPAPPTSVSARSASPDVTALCPVYQPRRSSRLARLAGASLAGIAAAGASAPWEQRWLLPLAVAALVLLLQRVSLRQGFL
LGLLFGLGYTLVLTVWMRAVGTDAWLLISPVVAAYYALAGVGIALVGRLRGWPWWTACVWVAVETAMSTWPLGGFPWTRL
AWATVDTPFALWLPWVSATGVSFLVALTGATLAWMVREGRARPLGAGAAIVAALLVGSAPVQFRPDSLTSSWEAGRPTVT
VAAVQGDVPGAGNDLVAVHEQVTNNHVQATISLAQQVRSGDVEQPDFVLWPENSTAVDPFRDAQTNSGISRAVSAIGVPV
LVGAIVDGPRPDAVLNQGLVWLPDGLTEVRYTKRHPVPFGEYVPFRSQLSGLKIGRLDMIPRDMIAGTRTQPLDIAGTRV
VDLICFDVAFDDSVTDQVQNDGEMVTVQTSNATFTGTAQLQQQFTISRARAIETGRTVVVASTNGISGVIGPDGTVRDRL
APRTTDIAVAQVPLIDAQTPAVRYGSLIRQVLSLAGVTAVIAATAAAAGRRFPRLRRLGGWPARRSERKLGP
>Mature_551_residues
PPAPPTSVSARSASPDVTALCPVYQPRRSSRLARLAGASLAGIAAAGASAPWEQRWLLPLAVAALVLLLQRVSLRQGFLL
GLLFGLGYTLVLTVWMRAVGTDAWLLISPVVAAYYALAGVGIALVGRLRGWPWWTACVWVAVETAMSTWPLGGFPWTRLA
WATVDTPFALWLPWVSATGVSFLVALTGATLAWMVREGRARPLGAGAAIVAALLVGSAPVQFRPDSLTSSWEAGRPTVTV
AAVQGDVPGAGNDLVAVHEQVTNNHVQATISLAQQVRSGDVEQPDFVLWPENSTAVDPFRDAQTNSGISRAVSAIGVPVL
VGAIVDGPRPDAVLNQGLVWLPDGLTEVRYTKRHPVPFGEYVPFRSQLSGLKIGRLDMIPRDMIAGTRTQPLDIAGTRVV
DLICFDVAFDDSVTDQVQNDGEMVTVQTSNATFTGTAQLQQQFTISRARAIETGRTVVVASTNGISGVIGPDGTVRDRLA
PRTTDIAVAQVPLIDAQTPAVRYGSLIRQVLSLAGVTAVIAATAAAAGRRFPRLRRLGGWPARRSERKLGP

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=443, Percent_Identity=25.7336343115124, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 58593; Mature: 58462

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPAPPTSVSARSASPDVTALCPVYQPRRSSRLARLAGASLAGIAAAGASAPWEQRWLLP
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHH
LAVAALVLLLQRVSLRQGFLLGLLFGLGYTLVLTVWMRAVGTDAWLLISPVVAAYYALAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VGIALVGRLRGWPWWTACVWVAVETAMSTWPLGGFPWTRLAWATVDTPFALWLPWVSATG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHHHH
VSFLVALTGATLAWMVREGRARPLGAGAAIVAALLVGSAPVQFRPDSLTSSWEAGRPTVT
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEE
VAAVQGDVPGAGNDLVAVHEQVTNNHVQATISLAQQVRSGDVEQPDFVLWPENSTAVDPF
EEEEECCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
RDAQTNSGISRAVSAIGVPVLVGAIVDGPRPDAVLNQGLVWLPDGLTEVRYTKRHPVPFG
CCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHCCEEECCCCCHHHHCCCCCCCCCC
EYVPFRSQLSGLKIGRLDMIPRDMIAGTRTQPLDIAGTRVVDLICFDVAFDDSVTDQVQN
CCCCHHHHHCCCEECCCCCCCHHHHCCCCCCCCCCCCHHEEEEEEEEHHCCCCHHHHHCC
DGEMVTVQTSNATFTGTAQLQQQFTISRARAIETGRTVVVASTNGISGVIGPDGTVRDRL
CCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCHHHCC
APRTTDIAVAQVPLIDAQTPAVRYGSLIRQVLSLAGVTAVIAATAAAAGRRFPRLRRLGG
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
WPARRSERKLGP
CCCCCCCCCCCC
>Mature Secondary Structure 
PPAPPTSVSARSASPDVTALCPVYQPRRSSRLARLAGASLAGIAAAGASAPWEQRWLLP
CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHH
LAVAALVLLLQRVSLRQGFLLGLLFGLGYTLVLTVWMRAVGTDAWLLISPVVAAYYALAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VGIALVGRLRGWPWWTACVWVAVETAMSTWPLGGFPWTRLAWATVDTPFALWLPWVSATG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHHHH
VSFLVALTGATLAWMVREGRARPLGAGAAIVAALLVGSAPVQFRPDSLTSSWEAGRPTVT
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEE
VAAVQGDVPGAGNDLVAVHEQVTNNHVQATISLAQQVRSGDVEQPDFVLWPENSTAVDPF
EEEEECCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
RDAQTNSGISRAVSAIGVPVLVGAIVDGPRPDAVLNQGLVWLPDGLTEVRYTKRHPVPFG
CCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHCCEEECCCCCHHHHCCCCCCCCCC
EYVPFRSQLSGLKIGRLDMIPRDMIAGTRTQPLDIAGTRVVDLICFDVAFDDSVTDQVQN
CCCCHHHHHCCCEECCCCCCCHHHHCCCCCCCCCCCCHHEEEEEEEEHHCCCCHHHHHCC
DGEMVTVQTSNATFTGTAQLQQQFTISRARAIETGRTVVVASTNGISGVIGPDGTVRDRL
CCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCHHHCC
APRTTDIAVAQVPLIDAQTPAVRYGSLIRQVLSLAGVTAVIAATAAAAGRRFPRLRRLGG
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
WPARRSERKLGP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]