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The map label for this gene is ywaC [H]

Identifier: 119716419

GI number: 119716419

Start: 2340554

End: 2341225

Strand: Reverse

Name: ywaC [H]

Synonym: Noca_2189

Alternate gene names: 119716419

Gene position: 2341225-2340554 (Counterclockwise)

Preceding gene: 119716420

Following gene: 119716416

Centisome position: 46.96

GC content: 63.84

Gene sequence:

>672_bases
ATGGCGACGTACCAGTTCGCCATCATGGAGATCGAGACCAAGGTCTCGATCCTGCAGGACGAGTTCCGCCTCCTCCATCA
GTACAACCCCATCGAACACATCATCAGCCGTTTGAAGAGCCCCGAGAGCGTGGTGGCCAAGGCTCGCAAACAGGGTTGCG
GCCCGAGCCTCGCTGAGCTGCGGGACGGCGTCCGCGACATCGCCGGGGTCCGGGTGGTGTGCAGCTTCACGAGCGACGTG
TATCGCGTGCAGCAGGTGCTCTGCAGCCAGGCCGACATCAGACTGGTCGAGCTCGAGGACTACATCTCTGACCCCAAGCC
GAGCGGCTACCGCTCGCTGCACGCCATCGTCGAGATCCCGGTGTTCTTGTCGGGTGAGACCGTGCTCGTCCCGGTGGAGA
TGCAGTTCCGCACGATCGCCCAGGACTTCTGGGCCAGCCTCGAGCACAAGATCTTCTACAAGTACGACCGCTCAGTACCC
CACGAGCTCCGGGTCGGTCTTCGGGACGCCGCAGCGACGGCCGCCGAGCTGGACCGCGAGATGGAGAGGCTCTCGGGGGA
GGTCCAGGACCTCGCGGACACAGGGCTCGCTGACGACGTCATCACCGACCAGACGGTGTCTGACTTCTTGAGCTTCATCT
CCGCAGCACGGAAATCCCCACCAGGAGGCTGA

Upstream 100 bases:

>100_bases
CGCGCATCATCCAAGCTCGGACCCCTCGTCGGCCGAGCCTCTCGGACTAGGTGATGCACTCACAAATCTCAGGTCGGCAC
GGAAAGATGTGACCAGGTTC

Downstream 100 bases:

>100_bases
ACCGTCCGGGACTGCCCCGCGTTTGGTTGACACTCGCAACTCAGAGTGTTCGTACACGAAGGCCCGGCTCCGCCCGGGCC
TTCGCATTGGCTTCGCGGGG

Product: RelA/SpoT domain-containing protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MATYQFAIMEIETKVSILQDEFRLLHQYNPIEHIISRLKSPESVVAKARKQGCGPSLAELRDGVRDIAGVRVVCSFTSDV
YRVQQVLCSQADIRLVELEDYISDPKPSGYRSLHAIVEIPVFLSGETVLVPVEMQFRTIAQDFWASLEHKIFYKYDRSVP
HELRVGLRDAAATAAELDREMERLSGEVQDLADTGLADDVITDQTVSDFLSFISAARKSPPGG

Sequences:

>Translated_223_residues
MATYQFAIMEIETKVSILQDEFRLLHQYNPIEHIISRLKSPESVVAKARKQGCGPSLAELRDGVRDIAGVRVVCSFTSDV
YRVQQVLCSQADIRLVELEDYISDPKPSGYRSLHAIVEIPVFLSGETVLVPVEMQFRTIAQDFWASLEHKIFYKYDRSVP
HELRVGLRDAAATAAELDREMERLSGEVQDLADTGLADDVITDQTVSDFLSFISAARKSPPGG
>Mature_222_residues
ATYQFAIMEIETKVSILQDEFRLLHQYNPIEHIISRLKSPESVVAKARKQGCGPSLAELRDGVRDIAGVRVVCSFTSDVY
RVQQVLCSQADIRLVELEDYISDPKPSGYRSLHAIVEIPVFLSGETVLVPVEMQFRTIAQDFWASLEHKIFYKYDRSVPH
ELRVGLRDAAATAAELDREMERLSGEVQDLADTGLADDVITDQTVSDFLSFISAARKSPPGG

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 24947; Mature: 24815

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYQFAIMEIETKVSILQDEFRLLHQYNPIEHIISRLKSPESVVAKARKQGCGPSLAEL
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH
RDGVRDIAGVRVVCSFTSDVYRVQQVLCSQADIRLVELEDYISDPKPSGYRSLHAIVEIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHH
VFLSGETVLVPVEMQFRTIAQDFWASLEHKIFYKYDRSVPHELRVGLRDAAATAAELDRE
EEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
MERLSGEVQDLADTGLADDVITDQTVSDFLSFISAARKSPPGG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATYQFAIMEIETKVSILQDEFRLLHQYNPIEHIISRLKSPESVVAKARKQGCGPSLAEL
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH
RDGVRDIAGVRVVCSFTSDVYRVQQVLCSQADIRLVELEDYISDPKPSGYRSLHAIVEIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHH
VFLSGETVLVPVEMQFRTIAQDFWASLEHKIFYKYDRSVPHELRVGLRDAAATAAELDRE
EEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
MERLSGEVQDLADTGLADDVITDQTVSDFLSFISAARKSPPGG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]