| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716397
Identifier: 119716397
GI number: 119716397
Start: 2318890
End: 2319270
Strand: Direct
Name: 119716397
Synonym: Noca_2167
Alternate gene names: NA
Gene position: 2318890-2319270 (Clockwise)
Preceding gene: 119716396
Following gene: 119716398
Centisome position: 46.51
GC content: 68.77
Gene sequence:
>381_bases ATGACGACCAGCCGTGCGTCCGTCCAGGTGTCGCCGTATCCGCATCGGACGGGTGGACACTGCGGTTCCGGCGCCCTACG AGACCTCCTGGAATGGGCCGGACTCGGATGGGACGGCCCTCCCATCGAAGGCCTGGTCTTCACCCTCGGCGGCGCGCTCG GTCTGTCCTACGTACGCTCGCCCAACCTGTTCCCCCCCTTATACCTGGTTGGCCGCGGCGGTGAACTCGAACTGGACCTA CCTCGCCGGCTCGGCGGGACCGCCCAGCAGCGGGCCACCGACGACCCCACCGAGGGGTGGTCCTGGGTGCGCTCGGAGGT CGACCAAGGCCGACCGGTGATGGTGTGGGCCGACATCGCTGAACTGCCTACCTGCGAGTGA
Upstream 100 bases:
>100_bases GACCCGGGAACCGTCCCGTGGCCGCAGCCGTGAACGCACGGCCCGACGACCGACGGGCACCCCCCGCCCTACGCAGATCT CGACGCCCGAGGAAGACCAG
Downstream 100 bases:
>100_bases AGCTCTCGATGAGTCGCCACGACATCGTGGTCATCGGGTACGACGACGACGCCCAGGTAGCTCTTGTGGTCGACAACGAT CGCGAAGACATCCAACAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRSPNLFPPLYLVGRGGELELDL PRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIAELPTCE
Sequences:
>Translated_126_residues MTTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRSPNLFPPLYLVGRGGELELDL PRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIAELPTCE >Mature_125_residues TTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRSPNLFPPLYLVGRGGELELDLP RRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIAELPTCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13601; Mature: 13470
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRS CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC PNLFPPLYLVGRGGELELDLPRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIA CCCCCCEEEEECCCEEEEECCHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCC ELPTCE CCCCCC >Mature Secondary Structure TTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRS CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC PNLFPPLYLVGRGGELELDLPRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIA CCCCCCEEEEECCCEEEEECCHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCC ELPTCE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA