Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119716397

Identifier: 119716397

GI number: 119716397

Start: 2318890

End: 2319270

Strand: Direct

Name: 119716397

Synonym: Noca_2167

Alternate gene names: NA

Gene position: 2318890-2319270 (Clockwise)

Preceding gene: 119716396

Following gene: 119716398

Centisome position: 46.51

GC content: 68.77

Gene sequence:

>381_bases
ATGACGACCAGCCGTGCGTCCGTCCAGGTGTCGCCGTATCCGCATCGGACGGGTGGACACTGCGGTTCCGGCGCCCTACG
AGACCTCCTGGAATGGGCCGGACTCGGATGGGACGGCCCTCCCATCGAAGGCCTGGTCTTCACCCTCGGCGGCGCGCTCG
GTCTGTCCTACGTACGCTCGCCCAACCTGTTCCCCCCCTTATACCTGGTTGGCCGCGGCGGTGAACTCGAACTGGACCTA
CCTCGCCGGCTCGGCGGGACCGCCCAGCAGCGGGCCACCGACGACCCCACCGAGGGGTGGTCCTGGGTGCGCTCGGAGGT
CGACCAAGGCCGACCGGTGATGGTGTGGGCCGACATCGCTGAACTGCCTACCTGCGAGTGA

Upstream 100 bases:

>100_bases
GACCCGGGAACCGTCCCGTGGCCGCAGCCGTGAACGCACGGCCCGACGACCGACGGGCACCCCCCGCCCTACGCAGATCT
CGACGCCCGAGGAAGACCAG

Downstream 100 bases:

>100_bases
AGCTCTCGATGAGTCGCCACGACATCGTGGTCATCGGGTACGACGACGACGCCCAGGTAGCTCTTGTGGTCGACAACGAT
CGCGAAGACATCCAACAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRSPNLFPPLYLVGRGGELELDL
PRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIAELPTCE

Sequences:

>Translated_126_residues
MTTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRSPNLFPPLYLVGRGGELELDL
PRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIAELPTCE
>Mature_125_residues
TTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRSPNLFPPLYLVGRGGELELDLP
RRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIAELPTCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13601; Mature: 13470

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRS
CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
PNLFPPLYLVGRGGELELDLPRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIA
CCCCCCEEEEECCCEEEEECCHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
ELPTCE
CCCCCC
>Mature Secondary Structure 
TTSRASVQVSPYPHRTGGHCGSGALRDLLEWAGLGWDGPPIEGLVFTLGGALGLSYVRS
CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
PNLFPPLYLVGRGGELELDLPRRLGGTAQQRATDDPTEGWSWVRSEVDQGRPVMVWADIA
CCCCCCEEEEECCCEEEEECCHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
ELPTCE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA