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The map label for this gene is 119716395

Identifier: 119716395

GI number: 119716395

Start: 2316611

End: 2317240

Strand: Direct

Name: 119716395

Synonym: Noca_2164

Alternate gene names: NA

Gene position: 2316611-2317240 (Clockwise)

Preceding gene: 119716391

Following gene: 119716396

Centisome position: 46.46

GC content: 71.27

Gene sequence:

>630_bases
ATGAGGAAGCTGCCGGCGAAGCTGGCCAGTCAGCTGTACGGCGCGGCCGAGTTGATCGCGGAGCGCGGTCTGGATGGCAC
CAAGATCGAGGACATCGCCGAGGCCACGGGCATTCCCAAGGCCACGATCTACTACCACCTCGATGGCAAGAACGCCGTCC
TGGAGTTCCTCCTCACCGACCTGCTGGAGATGATCGCTGGGGCCGTCGGTGTTGCGGTGTCGAGCGCTGAGGACGCGCGG
ACCCGTCTCGAGGCGGCAGTCGCCGCGCAGTTGGGCGTGATGCTCGCGCACCCGTTCCTGTGCCGGGCGCTGGTGGGCGA
CCTCGGTCGGGCCACCCGGCTGCCTGACCTGGCGGTGGCGTTGCGCAGCGCGTTCTACGAGCCGATCGAGAAGCTGCTGG
CCGACGGCGTCGCCGACGGGTCGCTGCGCCAGGTCGCCGATCCGGGCGCCGTGGCCCTGAGCGTCTTCGGCGCCATCACC
GTCGCCGGCCTCAGTGCAGCGGTCGAGGGGCCGTCCGCCGATCCGTCCGCCGACGCAGCGCGCTTCTCCGCCGCGGTCGG
CGAACTCATCCTCGACGGCCTCGCCACGCCTCGCCCGCGCGGTGGCCACGAATCGGACGAGCGGCCGTGA

Upstream 100 bases:

>100_bases
TCTAGATCTTTGGTTTGTACTCGCAGTACAACATACGATGTGGACGGCGTCGACCCCCGAGAACCGAACGGTCCGGGCGG
ACAGGGAGCAGAGGTGGGCA

Downstream 100 bases:

>100_bases
CGGCCTGGGCGACCTGGGCGGCCTGGGCGAGCTCCTGCGCCGGTTGAGAGGAGAGTTCCGCGGCAGCTGCTTGGCTCGGC
GAGTCCAAGATCAGCGGTCA

Product: regulatory protein TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRKLPAKLASQLYGAAELIAERGLDGTKIEDIAEATGIPKATIYYHLDGKNAVLEFLLTDLLEMIAGAVGVAVSSAEDAR
TRLEAAVAAQLGVMLAHPFLCRALVGDLGRATRLPDLAVALRSAFYEPIEKLLADGVADGSLRQVADPGAVALSVFGAIT
VAGLSAAVEGPSADPSADAARFSAAVGELILDGLATPRPRGGHESDERP

Sequences:

>Translated_209_residues
MRKLPAKLASQLYGAAELIAERGLDGTKIEDIAEATGIPKATIYYHLDGKNAVLEFLLTDLLEMIAGAVGVAVSSAEDAR
TRLEAAVAAQLGVMLAHPFLCRALVGDLGRATRLPDLAVALRSAFYEPIEKLLADGVADGSLRQVADPGAVALSVFGAIT
VAGLSAAVEGPSADPSADAARFSAAVGELILDGLATPRPRGGHESDERP
>Mature_209_residues
MRKLPAKLASQLYGAAELIAERGLDGTKIEDIAEATGIPKATIYYHLDGKNAVLEFLLTDLLEMIAGAVGVAVSSAEDAR
TRLEAAVAAQLGVMLAHPFLCRALVGDLGRATRLPDLAVALRSAFYEPIEKLLADGVADGSLRQVADPGAVALSVFGAIT
VAGLSAAVEGPSADPSADAARFSAAVGELILDGLATPRPRGGHESDERP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21525; Mature: 21525

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLPAKLASQLYGAAELIAERGLDGTKIEDIAEATGIPKATIYYHLDGKNAVLEFLLTD
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
LLEMIAGAVGVAVSSAEDARTRLEAAVAAQLGVMLAHPFLCRALVGDLGRATRLPDLAVA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LRSAFYEPIEKLLADGVADGSLRQVADPGAVALSVFGAITVAGLSAAVEGPSADPSADAA
HHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RFSAAVGELILDGLATPRPRGGHESDERP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKLPAKLASQLYGAAELIAERGLDGTKIEDIAEATGIPKATIYYHLDGKNAVLEFLLTD
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
LLEMIAGAVGVAVSSAEDARTRLEAAVAAQLGVMLAHPFLCRALVGDLGRATRLPDLAVA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LRSAFYEPIEKLLADGVADGSLRQVADPGAVALSVFGAITVAGLSAAVEGPSADPSADAA
HHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RFSAAVGELILDGLATPRPRGGHESDERP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA