| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716373
Identifier: 119716373
GI number: 119716373
Start: 2290521
End: 2291579
Strand: Reverse
Name: 119716373
Synonym: Noca_2142
Alternate gene names: NA
Gene position: 2291579-2290521 (Counterclockwise)
Preceding gene: 119716375
Following gene: 119716372
Centisome position: 45.96
GC content: 63.36
Gene sequence:
>1059_bases ATGGATGCGATCGGCATCGGCATGACGCACTACCCAATGCTCGCCGGAACCGACGAGCACATGGCCGACCTGCTCAAGTG GACGCTCAACGACCCCGGCATCCCGGCCGGCTACAAGGACCCGGCCAACTGGCCGCCCCTCATGCAGAAGGAGTGGGCCG ATGACGAGGGTGTCGCCGCCGCAGCCGGCCATCGCGCCGACCTCCTCGAGCACCTGCGGCGTTGCCGCGACTACCTGGAC GACTTCCAACCAGACGTCGTGGTGGTCTGGGGAGACGACCAGTACGAGAACTTCCGAGAAGAGGTCGTGCCGCCGTTCTG CGTGCTGGCCTACCCCGACCTTGAGGTCGCACCGTTTGAACACATGAACGAGTTCGGGGTGCCGAACGCATGGGGTTGGC CCGACGACTTCACTATTCCGGTGCGCGGAGACGCAGCCCGCGCGCGCCAGCTGACCAACGACCTGGTGCGCGCAGGCTTC GACGTGGCCTACTCGTACGAGAAGCGCGCCAACTCACGCTTTCCGCACGCGATTCTCAATACGCAGCTCTTCTTGGACTA CGACAACGCGGGTTCGAAGTTCCCGTACGCGCTCGTTCCGATGACTGTGAACTGTTACGGGCAGCACGCCATCGTGCGAC GAGGAGGCATGGCGAGGTTCGCGGATATCGAGAACGAGGATGTCGATCCGGTCGGGCCCTCCCCGCAGCGTTGTTTCGAG TTGGGTCGAGCAATGGCTCGATCGTTCCGCGACCGCGATCTCCGGGTGGCCTTCGTGGCATCGTCGAGCTGGTCCCACGC CTTCCTCAACGACAAGAGTTGGCACATCGTCCCGGACACCCCGGCCGACGAAAAGCTCTACGAGGCGTTCCAGGCTGAAG ACTGGGCTGCTTTCACCGCGCCCACCGTGGAACACATCGTGGGCGCTGGACAGCACGAGATGCTGAATTGGTTCTGCCTT GCAGGTGCCTGCGCCGAGTCCGGCCTTGAGTTGAACTGGTCCGACCTGGTGGTCACCGACCTCTTCAACTCGAACAAATG CTTCGCCCTGTTCAGCTAG
Upstream 100 bases:
>100_bases CCAACCGGCCATCTCCCGGAATTGCCCCCTTCACATGCTCCGGCAAAGAGGTTATGGTTCATAACAGTCTTGATCTCTAC GCTGTTAACAAGGGGCACCG
Downstream 100 bases:
>100_bases CAAACCTCCGGCCGGGCCGCCGAGAACGGCGGCCGGGACCACGTCCCAGGATCTATCCGTCAGTTCGAGCTTGAAAGCAG ATGCAAGTAGATGACATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: 2 3-Dihydroxy-P-Cumate Dioxygenase
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MDAIGIGMTHYPMLAGTDEHMADLLKWTLNDPGIPAGYKDPANWPPLMQKEWADDEGVAAAAGHRADLLEHLRRCRDYLD DFQPDVVVVWGDDQYENFREEVVPPFCVLAYPDLEVAPFEHMNEFGVPNAWGWPDDFTIPVRGDAARARQLTNDLVRAGF DVAYSYEKRANSRFPHAILNTQLFLDYDNAGSKFPYALVPMTVNCYGQHAIVRRGGMARFADIENEDVDPVGPSPQRCFE LGRAMARSFRDRDLRVAFVASSSWSHAFLNDKSWHIVPDTPADEKLYEAFQAEDWAAFTAPTVEHIVGAGQHEMLNWFCL AGACAESGLELNWSDLVVTDLFNSNKCFALFS
Sequences:
>Translated_352_residues MDAIGIGMTHYPMLAGTDEHMADLLKWTLNDPGIPAGYKDPANWPPLMQKEWADDEGVAAAAGHRADLLEHLRRCRDYLD DFQPDVVVVWGDDQYENFREEVVPPFCVLAYPDLEVAPFEHMNEFGVPNAWGWPDDFTIPVRGDAARARQLTNDLVRAGF DVAYSYEKRANSRFPHAILNTQLFLDYDNAGSKFPYALVPMTVNCYGQHAIVRRGGMARFADIENEDVDPVGPSPQRCFE LGRAMARSFRDRDLRVAFVASSSWSHAFLNDKSWHIVPDTPADEKLYEAFQAEDWAAFTAPTVEHIVGAGQHEMLNWFCL AGACAESGLELNWSDLVVTDLFNSNKCFALFS >Mature_352_residues MDAIGIGMTHYPMLAGTDEHMADLLKWTLNDPGIPAGYKDPANWPPLMQKEWADDEGVAAAAGHRADLLEHLRRCRDYLD DFQPDVVVVWGDDQYENFREEVVPPFCVLAYPDLEVAPFEHMNEFGVPNAWGWPDDFTIPVRGDAARARQLTNDLVRAGF DVAYSYEKRANSRFPHAILNTQLFLDYDNAGSKFPYALVPMTVNCYGQHAIVRRGGMARFADIENEDVDPVGPSPQRCFE LGRAMARSFRDRDLRVAFVASSSWSHAFLNDKSWHIVPDTPADEKLYEAFQAEDWAAFTAPTVEHIVGAGQHEMLNWFCL AGACAESGLELNWSDLVVTDLFNSNKCFALFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39603; Mature: 39603
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIGIGMTHYPMLAGTDEHMADLLKWTLNDPGIPAGYKDPANWPPLMQKEWADDEGVAA CCCCCCCCHHCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCH AAGHRADLLEHLRRCRDYLDDFQPDVVVVWGDDQYENFREEVVPPFCVLAYPDLEVAPFE HCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCHH HMNEFGVPNAWGWPDDFTIPVRGDAARARQLTNDLVRAGFDVAYSYEKRANSRFPHAILN HHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHEEEHHHHCCCCCCHHHHC TQLFLDYDNAGSKFPYALVPMTVNCYGQHAIVRRGGMARFADIENEDVDPVGPSPQRCFE CEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCHHHHHH LGRAMARSFRDRDLRVAFVASSSWSHAFLNDKSWHIVPDTPADEKLYEAFQAEDWAAFTA HHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCCCC PTVEHIVGAGQHEMLNWFCLAGACAESGLELNWSDLVVTDLFNSNKCFALFS CHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCEEEEEC >Mature Secondary Structure MDAIGIGMTHYPMLAGTDEHMADLLKWTLNDPGIPAGYKDPANWPPLMQKEWADDEGVAA CCCCCCCCHHCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCH AAGHRADLLEHLRRCRDYLDDFQPDVVVVWGDDQYENFREEVVPPFCVLAYPDLEVAPFE HCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCHH HMNEFGVPNAWGWPDDFTIPVRGDAARARQLTNDLVRAGFDVAYSYEKRANSRFPHAILN HHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHEEEHHHHCCCCCCHHHHC TQLFLDYDNAGSKFPYALVPMTVNCYGQHAIVRRGGMARFADIENEDVDPVGPSPQRCFE CEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCHHHHHH LGRAMARSFRDRDLRVAFVASSSWSHAFLNDKSWHIVPDTPADEKLYEAFQAEDWAAFTA HHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCCCC PTVEHIVGAGQHEMLNWFCLAGACAESGLELNWSDLVVTDLFNSNKCFALFS CHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA