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The map label for this gene is hcaC [H]

Identifier: 119716366

GI number: 119716366

Start: 2284615

End: 2284965

Strand: Reverse

Name: hcaC [H]

Synonym: Noca_2135

Alternate gene names: 119716366

Gene position: 2284965-2284615 (Counterclockwise)

Preceding gene: 119716367

Following gene: 119716365

Centisome position: 45.83

GC content: 61.82

Gene sequence:

>351_bases
ATGGCCCGCAACCTCGTGGCGCACATCTCTGACCTAACCCCAGGGCAGACCACGGTTGTAGACCTGGATGGCGAGGAAGT
GCTGCTCGTCAGAATCAAGGACAAGGTCTACGCCATCAACAACCTCTGTTCGCATGCAGAGGGCTGGCTCGACATGGGGC
AACTGTTCGAATCTAGTTGTGAGATCGGATGTCCGCTCCACGATGGCCGGTTCGACCTTCGCACTGGACAAGCCACGCAC
GAGCCTGCGACCGAGCCCGTCCCTGTGTACCGGGTCGAGGTCGAGGATGGGGACATCTTCCTCGTCGAAGGTGCCCCGGA
TCCGGCGACGGCGTCAGTGCGGGCCTCGTGA

Upstream 100 bases:

>100_bases
TACCGGCCAGGTTCTGAGCGTCAACGGTGGGTCCTCGATGCTCTGAAAGCAGTCGATCGCCTGCACCAATCCCATCTCAA
CGACTCAAAGCGGAGGACTC

Downstream 100 bases:

>100_bases
TGGTCGAGACCGAGGATCCGGTGGTCGTCCTCGGCGGCGGCATGGCAGGTGGTCGCGCTGCGGAGTTCCTCGCGATGCGA
GGCCGCGGCACTCGCGTCGT

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Digoxigenin ferredoxin subunit [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MARNLVAHISDLTPGQTTVVDLDGEEVLLVRIKDKVYAINNLCSHAEGWLDMGQLFESSCEIGCPLHDGRFDLRTGQATH
EPATEPVPVYRVEVEDGDIFLVEGAPDPATASVRAS

Sequences:

>Translated_116_residues
MARNLVAHISDLTPGQTTVVDLDGEEVLLVRIKDKVYAINNLCSHAEGWLDMGQLFESSCEIGCPLHDGRFDLRTGQATH
EPATEPVPVYRVEVEDGDIFLVEGAPDPATASVRAS
>Mature_115_residues
ARNLVAHISDLTPGQTTVVDLDGEEVLLVRIKDKVYAINNLCSHAEGWLDMGQLFESSCEIGCPLHDGRFDLRTGQATHE
PATEPVPVYRVEVEDGDIFLVEGAPDPATASVRAS

Specific function: Part of the multicomponent 3-phenylpropionate dioxygenase, that converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP- dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively. This protein se

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=101, Percent_Identity=36.6336633663366, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12589; Mature: 12458

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNLVAHISDLTPGQTTVVDLDGEEVLLVRIKDKVYAINNLCSHAEGWLDMGQLFESSC
CCCCCEEEHHCCCCCCEEEEEECCCEEEEEEECCCEEEHHHHHHHCCCHHHHHHHHHCCC
EIGCPLHDGRFDLRTGQATHEPATEPVPVYRVEVEDGDIFLVEGAPDPATASVRAS
CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEECC
>Mature Secondary Structure 
ARNLVAHISDLTPGQTTVVDLDGEEVLLVRIKDKVYAINNLCSHAEGWLDMGQLFESSC
CCCCEEEHHCCCCCCEEEEEECCCEEEEEEECCCEEEHHHHHHHCCCHHHHHHHHHCCC
EIGCPLHDGRFDLRTGQATHEPATEPVPVYRVEVEDGDIFLVEGAPDPATASVRAS
CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA