| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is aceE [H]
Identifier: 119716336
GI number: 119716336
Start: 2248629
End: 2251307
Strand: Reverse
Name: aceE [H]
Synonym: Noca_2105
Alternate gene names: 119716336
Gene position: 2251307-2248629 (Counterclockwise)
Preceding gene: 119716337
Following gene: 119716335
Centisome position: 45.15
GC content: 74.09
Gene sequence:
>2679_bases GTGACCACTGCGAACCTCCCCCACGACCCGATCGACTGGCACGACGAGCGCGCGGAGTGGCTCGACTCGGTCAGCGGCCT GGTCCGCACCCACGGACCGCACGCCGCGAGCCTGCTCCTCCGCGACGTGGCCACCCACGCCGGCCGGCTCGGGGTCGCGA CCGGGCCGCGTACGCCGTACCTCAACACGATCCCGACCCAGGAGTGGGCCGCCTATCCCGGCGACCTCGCCCTCGAGGAG CGGATCGACGCCTACCTGCGGTGGAACGCGATGGCGATGGTGGTCCGGGCCAACAAGCGCCACGCCGGCCTCGGCGGGCA CCTGTCGACCTACGCGTCCACGCTGACCCTGTGGGAGGTCGGCTTCCAGCACTTCTTCCGCGGCCGCGGCTCGGCGGGCG AGGCCGTCGTCCCCGGAGACCAGGTGTTCTTCCAGGGCCACGCCAGCCCGGGCATCTACGCCCGGGCCTTCCTCGAGGGC CGGCTGAGCGCCGAGCAGCTCGACCACTTCCGGCGCGAGGTAGCCGGCGCGGGGCAGGGCCTCCCGTCGTACCCGCACCC CCGGAGCATGGCCGGCTTCTGGGAGTTCCCGACCGTGAGCCTCGGCATCGGCCCGCTGCACGCCGTCTACCAGGCCCGAT TCAACCGCTACCTCGCCGCGCGCGGCCTCGCCGACACGGCGGCCGCCCGGGTGTGGTGCTTCGTCGGCGACGGCGAGATC GACGAGCCCGAGACGCTGGCCGCGATCCGGCTGGCCGCCCGCGAGCACCTGGACAACATCGTCTTCGTCGTCAACGGCAA CCTCCAGCGCCTCGACGGGCCGGTCCGCGGCAACAGTCGCGTCCTCGACGAGCTCGAGGGCATCTTCGCCGGCGCGGGTT GGCACGTCCTCAAGGTGCTGTGGGGCAGCCGGTGGACCTCGCTCTTCGAGCGCCCCGGCGGCGAGGCCCTGCTCGACCGG CTCGAGGCGATGAACGACGGGGACCTGCAGCGGCTGGCGATCCTCGAGCCCGCCGAGCTGCGCGCGACCCTGTTCGGCGG CGGCGACGCCGCGCTGGAGGCGCTCGGCGCGACGCTCTCCGATGCCGACCTCGCCGGGCTGCGGCGCGGCGGGCACGACC CGCGAGCCGTCTACGCTGCGTACGCCGAGGCCGTCGCGCACCGGGGCGAGCCCACCGTGGTGCTGGCGCAGACGATCAAG GGCTACGCGCTCGGCCCGAACTTCGAGGGCCGCAACGCCACTCACCAGATGAAGAAGATGACGCCGGACCAGCTGCGCAT CTTCCGCGACATCCTCCGGGTGCCGGTGACCGACGAGGAGCTGGCCGACGGGCTGCCGCCGTACCTGCCGCTGCCCGAGG GCTCGCCGGAGCTGGAGTACCTCCACGCCCACCGGCGCACGCTCGGCGGCGCGCTCCCCCGCCGGCCGCTGCGCCCCGCC GTCCTGGCCGCCCAGCCGGCCGACGCGCCCTTCACCCAGTTCGACGCCGGGTCCGGCAAGCGCACCGTGTCGACCACGGT CGCCTACACCCGGCTGCTGCACTCGCTGATGCGCGACCCCGAGGTCGGGCGGCGAATCGTGCCGATCGTCCCGGACGAGG GCCGCACCTTCGGCTACGAGCCGCTGTACAGCGAGTTCGGCATCTACGCGCCCGACGGGCAGCAGTACACGCCGGTCGAC GCCGGCCTGCCGCTGTCCTACCGGGAGAGTGCGGACGGGCAGGTGCTGCAGGAGGGGATCACCGAGGCCGGCGGGCTCGC CGAGCTGACGGCGGCGGCCACGGCCGGGCACACCTGGGACACCGCGGTCGTCCCGTTCTTCACCTACTACTCGATGTTCG GCTTCCAGCGCGTCGGCGACCTGATCTGGGCCCTCGCCGACGCCCGGGGCCGCGGGTTCCTGGTCGGCGCGACGGCCGGT CGTACGACGCTCGCCGGCGAGGGCCTGCAGCACACCGACGGCTCCTCGCAGCTGGCCGCGCTCGCCGTCCCGAGCTGCCA CGCCTACGACCCGGCCTTCGCCTACGAGACCGCCACCATCGTCCGCGACGGGATCCGGCGGATGTACGACGCCGGCGAGG AGTCCTTCTACTACCTGACCGTCTACAACGAGGACTACGTCCAGCCGGTCAAGCCGGTCGACTCCGGTGTCCGCAGCGTC AGCGTGGACGAGGCGATCGTCGCCGGCCTGTACCGGGTCGACGCGACCGAGGGCAATCGGCTCCCCCAGGTCCGCCTCCT GGCCTCCGGGCCGGCCGTCCGCACCGCGCAGCAGGCGGCCGCGGACCTGGCCGCGCGTGACGGCGTCACCGCCGAGGTGT GGTCGGTGACCAGCTGGAAGGCGCTGCGCGACGACGCGCTCGAGACCGAGCGCTGGAACCGCGAGCACCCCCACGAGCCG GCCCGCGTCAGCTACCTGCGCCGTGCCCTCGGCGACCTGCCGGTGCCGGTGGTCGCCGTGAGCGACTACGTGTCCGCGTT GCCGGACCAGATCGCGCGCTTCGTCGACGCCCCCTTCGTGAGCCTCGGCACCGACGGCTACGGCCTCTCCGACACGCGCG AGGAGCTCCGCGCCCACTTCGGTGTCGACGCGGAGGGGATCCGCGCGACGGCTGCCGGGGTCGCCGACCGGCCGGCGACC CACCGCGCGGCCCGCCCCGACGAGGGCCTGGTGGCCTGA
Upstream 100 bases:
>100_bases TCGTGACCCCGCACCTGTGCGTCGCCCGGCTGGAGCCACGAGCTTCGGCGTAGACCCGGGGGTCTTTGTTTTTAATGTGA TCTCGCGGGATAATCGGACC
Downstream 100 bases:
>100_bases GCTGCGGCACCGCACCGGTGTCGTTCGAACCGACCGAAGGAGACCGATCAAACCGATGATTGCCGAACGCACAGCCACGA CCACCTGGCAGGGCGGCCTC
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 892; Mature: 891
Protein sequence:
>892_residues MTTANLPHDPIDWHDERAEWLDSVSGLVRTHGPHAASLLLRDVATHAGRLGVATGPRTPYLNTIPTQEWAAYPGDLALEE RIDAYLRWNAMAMVVRANKRHAGLGGHLSTYASTLTLWEVGFQHFFRGRGSAGEAVVPGDQVFFQGHASPGIYARAFLEG RLSAEQLDHFRREVAGAGQGLPSYPHPRSMAGFWEFPTVSLGIGPLHAVYQARFNRYLAARGLADTAAARVWCFVGDGEI DEPETLAAIRLAAREHLDNIVFVVNGNLQRLDGPVRGNSRVLDELEGIFAGAGWHVLKVLWGSRWTSLFERPGGEALLDR LEAMNDGDLQRLAILEPAELRATLFGGGDAALEALGATLSDADLAGLRRGGHDPRAVYAAYAEAVAHRGEPTVVLAQTIK GYALGPNFEGRNATHQMKKMTPDQLRIFRDILRVPVTDEELADGLPPYLPLPEGSPELEYLHAHRRTLGGALPRRPLRPA VLAAQPADAPFTQFDAGSGKRTVSTTVAYTRLLHSLMRDPEVGRRIVPIVPDEGRTFGYEPLYSEFGIYAPDGQQYTPVD AGLPLSYRESADGQVLQEGITEAGGLAELTAAATAGHTWDTAVVPFFTYYSMFGFQRVGDLIWALADARGRGFLVGATAG RTTLAGEGLQHTDGSSQLAALAVPSCHAYDPAFAYETATIVRDGIRRMYDAGEESFYYLTVYNEDYVQPVKPVDSGVRSV SVDEAIVAGLYRVDATEGNRLPQVRLLASGPAVRTAQQAAADLAARDGVTAEVWSVTSWKALRDDALETERWNREHPHEP ARVSYLRRALGDLPVPVVAVSDYVSALPDQIARFVDAPFVSLGTDGYGLSDTREELRAHFGVDAEGIRATAAGVADRPAT HRAARPDEGLVA
Sequences:
>Translated_892_residues MTTANLPHDPIDWHDERAEWLDSVSGLVRTHGPHAASLLLRDVATHAGRLGVATGPRTPYLNTIPTQEWAAYPGDLALEE RIDAYLRWNAMAMVVRANKRHAGLGGHLSTYASTLTLWEVGFQHFFRGRGSAGEAVVPGDQVFFQGHASPGIYARAFLEG RLSAEQLDHFRREVAGAGQGLPSYPHPRSMAGFWEFPTVSLGIGPLHAVYQARFNRYLAARGLADTAAARVWCFVGDGEI DEPETLAAIRLAAREHLDNIVFVVNGNLQRLDGPVRGNSRVLDELEGIFAGAGWHVLKVLWGSRWTSLFERPGGEALLDR LEAMNDGDLQRLAILEPAELRATLFGGGDAALEALGATLSDADLAGLRRGGHDPRAVYAAYAEAVAHRGEPTVVLAQTIK GYALGPNFEGRNATHQMKKMTPDQLRIFRDILRVPVTDEELADGLPPYLPLPEGSPELEYLHAHRRTLGGALPRRPLRPA VLAAQPADAPFTQFDAGSGKRTVSTTVAYTRLLHSLMRDPEVGRRIVPIVPDEGRTFGYEPLYSEFGIYAPDGQQYTPVD AGLPLSYRESADGQVLQEGITEAGGLAELTAAATAGHTWDTAVVPFFTYYSMFGFQRVGDLIWALADARGRGFLVGATAG RTTLAGEGLQHTDGSSQLAALAVPSCHAYDPAFAYETATIVRDGIRRMYDAGEESFYYLTVYNEDYVQPVKPVDSGVRSV SVDEAIVAGLYRVDATEGNRLPQVRLLASGPAVRTAQQAAADLAARDGVTAEVWSVTSWKALRDDALETERWNREHPHEP ARVSYLRRALGDLPVPVVAVSDYVSALPDQIARFVDAPFVSLGTDGYGLSDTREELRAHFGVDAEGIRATAAGVADRPAT HRAARPDEGLVA >Mature_891_residues TTANLPHDPIDWHDERAEWLDSVSGLVRTHGPHAASLLLRDVATHAGRLGVATGPRTPYLNTIPTQEWAAYPGDLALEER IDAYLRWNAMAMVVRANKRHAGLGGHLSTYASTLTLWEVGFQHFFRGRGSAGEAVVPGDQVFFQGHASPGIYARAFLEGR LSAEQLDHFRREVAGAGQGLPSYPHPRSMAGFWEFPTVSLGIGPLHAVYQARFNRYLAARGLADTAAARVWCFVGDGEID EPETLAAIRLAAREHLDNIVFVVNGNLQRLDGPVRGNSRVLDELEGIFAGAGWHVLKVLWGSRWTSLFERPGGEALLDRL EAMNDGDLQRLAILEPAELRATLFGGGDAALEALGATLSDADLAGLRRGGHDPRAVYAAYAEAVAHRGEPTVVLAQTIKG YALGPNFEGRNATHQMKKMTPDQLRIFRDILRVPVTDEELADGLPPYLPLPEGSPELEYLHAHRRTLGGALPRRPLRPAV LAAQPADAPFTQFDAGSGKRTVSTTVAYTRLLHSLMRDPEVGRRIVPIVPDEGRTFGYEPLYSEFGIYAPDGQQYTPVDA GLPLSYRESADGQVLQEGITEAGGLAELTAAATAGHTWDTAVVPFFTYYSMFGFQRVGDLIWALADARGRGFLVGATAGR TTLAGEGLQHTDGSSQLAALAVPSCHAYDPAFAYETATIVRDGIRRMYDAGEESFYYLTVYNEDYVQPVKPVDSGVRSVS VDEAIVAGLYRVDATEGNRLPQVRLLASGPAVRTAQQAAADLAARDGVTAEVWSVTSWKALRDDALETERWNREHPHEPA RVSYLRRALGDLPVPVVAVSDYVSALPDQIARFVDAPFVSLGTDGYGLSDTREELRAHFGVDAEGIRATAAGVADRPATH RAARPDEGLVA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=870, Percent_Identity=46.2068965517241, Blast_Score=780, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 96744; Mature: 96612
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTANLPHDPIDWHDERAEWLDSVSGLVRTHGPHAASLLLRDVATHAGRLGVATGPRTPY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC LNTIPTQEWAAYPGDLALEERIDAYLRWNAMAMVVRANKRHAGLGGHLSTYASTLTLWEV CCCCCCHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH GFQHFFRGRGSAGEAVVPGDQVFFQGHASPGIYARAFLEGRLSAEQLDHFRREVAGAGQG HHHHHHCCCCCCCCEECCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC LPSYPHPRSMAGFWEFPTVSLGIGPLHAVYQARFNRYLAARGLADTAAARVWCFVGDGEI CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCC DEPETLAAIRLAAREHLDNIVFVVNGNLQRLDGPVRGNSRVLDELEGIFAGAGWHVLKVL CCCHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH WGSRWTSLFERPGGEALLDRLEAMNDGDLQRLAILEPAELRATLFGGGDAALEALGATLS HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHEEEEECCCHHHHHHHCCCCC DADLAGLRRGGHDPRAVYAAYAEAVAHRGEPTVVLAQTIKGYALGPNFEGRNATHQMKKM CHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHC TPDQLRIFRDILRVPVTDEELADGLPPYLPLPEGSPELEYLHAHRRTLGGALPRRPLRPA CHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH VLAAQPADAPFTQFDAGSGKRTVSTTVAYTRLLHSLMRDPEVGRRIVPIVPDEGRTFGYE HEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCCCCCCCC PLYSEFGIYAPDGQQYTPVDAGLPLSYRESADGQVLQEGITEAGGLAELTAAATAGHTWD CHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC TAVVPFFTYYSMFGFQRVGDLIWALADARGRGFLVGATAGRTTLAGEGLQHTDGSSQLAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEE LAVPSCHAYDPAFAYETATIVRDGIRRMYDAGEESFYYLTVYNEDYVQPVKPVDSGVRSV EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCHHC SVDEAIVAGLYRVDATEGNRLPQVRLLASGPAVRTAQQAAADLAARDGVTAEVWSVTSWK CHHHHHHHHHHEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH ALRDDALETERWNREHPHEPARVSYLRRALGDLPVPVVAVSDYVSALPDQIARFVDAPFV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE SLGTDGYGLSDTREELRAHFGVDAEGIRATAAGVADRPATHRAARPDEGLVA EECCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTANLPHDPIDWHDERAEWLDSVSGLVRTHGPHAASLLLRDVATHAGRLGVATGPRTPY CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC LNTIPTQEWAAYPGDLALEERIDAYLRWNAMAMVVRANKRHAGLGGHLSTYASTLTLWEV CCCCCCHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH GFQHFFRGRGSAGEAVVPGDQVFFQGHASPGIYARAFLEGRLSAEQLDHFRREVAGAGQG HHHHHHCCCCCCCCEECCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC LPSYPHPRSMAGFWEFPTVSLGIGPLHAVYQARFNRYLAARGLADTAAARVWCFVGDGEI CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCC DEPETLAAIRLAAREHLDNIVFVVNGNLQRLDGPVRGNSRVLDELEGIFAGAGWHVLKVL CCCHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH WGSRWTSLFERPGGEALLDRLEAMNDGDLQRLAILEPAELRATLFGGGDAALEALGATLS HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHEEEEECCCHHHHHHHCCCCC DADLAGLRRGGHDPRAVYAAYAEAVAHRGEPTVVLAQTIKGYALGPNFEGRNATHQMKKM CHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHC TPDQLRIFRDILRVPVTDEELADGLPPYLPLPEGSPELEYLHAHRRTLGGALPRRPLRPA CHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH VLAAQPADAPFTQFDAGSGKRTVSTTVAYTRLLHSLMRDPEVGRRIVPIVPDEGRTFGYE HEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCCCCCCCC PLYSEFGIYAPDGQQYTPVDAGLPLSYRESADGQVLQEGITEAGGLAELTAAATAGHTWD CHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC TAVVPFFTYYSMFGFQRVGDLIWALADARGRGFLVGATAGRTTLAGEGLQHTDGSSQLAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEE LAVPSCHAYDPAFAYETATIVRDGIRRMYDAGEESFYYLTVYNEDYVQPVKPVDSGVRSV EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCHHC SVDEAIVAGLYRVDATEGNRLPQVRLLASGPAVRTAQQAAADLAARDGVTAEVWSVTSWK CHHHHHHHHHHEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH ALRDDALETERWNREHPHEPARVSYLRRALGDLPVPVVAVSDYVSALPDQIARFVDAPFV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE SLGTDGYGLSDTREELRAHFGVDAEGIRATAAGVADRPATHRAARPDEGLVA EECCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA