| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716330
Identifier: 119716330
GI number: 119716330
Start: 2242607
End: 2243365
Strand: Direct
Name: 119716330
Synonym: Noca_2099
Alternate gene names: NA
Gene position: 2242607-2243365 (Clockwise)
Preceding gene: 119716324
Following gene: 119716347
Centisome position: 44.98
GC content: 76.81
Gene sequence:
>759_bases ATGGACCCGGAGCAGAGCTTGGTGATCTACGCCGACTTCGGCTCGCCCGCGTGCCTCGCGGCGAGCGCGCGCGCCGACGC CCTGGTGGCTGCCGGCGTCCGGGTCGACTGGCGTGCGATCGAGCCCGATCCCCGGCTGCCGGTCGGTGGCGTCCGGATGA GTGCGGCCGAGCGCGAGGCGCTGGAGCGCGAGCTCGAGGTGGTGGCCGGCCTGCTGGTCCCGGGCGAGGAGCTGCCCCGG TCGGTCCCGGCCTTCCGGCCGAACGCCCGTGGCCCGGTCGCCGGCTACGCCGAGGCGTACGGCGCGGGTGTGGCCGACGA CGTGCGGCGCCTGCTGTTCTCCGCCTACTGGAGCCGGGGGCTCGACATCGGGAGCACGGAGGTGCTCCGGCGGCTGCTGG CCGGCCCGGTGCTGCGTGGGCACGCGACCTCGGTGCCGCTGAGCGACTTCGGCCTGGCCGTGAGCCCCAGCCGCGGGCCG ATCACGATGGACGCGTTCCGCCGGATCCGCGACTGGTCCGCTCGGTGGCGGTCCCTGAACGCCGCGCCGCTGCCGCTCCT GGTGGTCGACGGGTCGCTGCCGGTGGCCGGCGAGACTGCGCTGCGCCGGCTCGAGAAGGAGATGAACCGCGCCGGCGCCA CGCCGCAGCCGGCGCTGCCCGACCCGGGCCGGTACCCACTCGTGCCGGACCCGCCGGCGCTCCCGTGGGCCTCGGCGAAC GGCGGGCCCTGGCGGCACGCCTACATGGTCGGCGCCTGA
Upstream 100 bases:
>100_bases ACCGGTTCGGCCCGGAAAGAGTGACCGTCGCCACTCGCCGACGAGAGTATTAACGAGTATTCTCGTGACAAATGTAATAG CCCGCGGAGGAGGAGTCGAG
Downstream 100 bases:
>100_bases GCCCTGTCGGGCGCTGGTTGGGGAGAAGAACCGGGCCGGCTCGCGATCGCGAGCCGGCCCGGCTGACTCTCAGGACGCGG CGACGCGGCCGATCCGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MDPEQSLVIYADFGSPACLAASARADALVAAGVRVDWRAIEPDPRLPVGGVRMSAAEREALERELEVVAGLLVPGEELPR SVPAFRPNARGPVAGYAEAYGAGVADDVRRLLFSAYWSRGLDIGSTEVLRRLLAGPVLRGHATSVPLSDFGLAVSPSRGP ITMDAFRRIRDWSARWRSLNAAPLPLLVVDGSLPVAGETALRRLEKEMNRAGATPQPALPDPGRYPLVPDPPALPWASAN GGPWRHAYMVGA
Sequences:
>Translated_252_residues MDPEQSLVIYADFGSPACLAASARADALVAAGVRVDWRAIEPDPRLPVGGVRMSAAEREALERELEVVAGLLVPGEELPR SVPAFRPNARGPVAGYAEAYGAGVADDVRRLLFSAYWSRGLDIGSTEVLRRLLAGPVLRGHATSVPLSDFGLAVSPSRGP ITMDAFRRIRDWSARWRSLNAAPLPLLVVDGSLPVAGETALRRLEKEMNRAGATPQPALPDPGRYPLVPDPPALPWASAN GGPWRHAYMVGA >Mature_252_residues MDPEQSLVIYADFGSPACLAASARADALVAAGVRVDWRAIEPDPRLPVGGVRMSAAEREALERELEVVAGLLVPGEELPR SVPAFRPNARGPVAGYAEAYGAGVADDVRRLLFSAYWSRGLDIGSTEVLRRLLAGPVLRGHATSVPLSDFGLAVSPSRGP ITMDAFRRIRDWSARWRSLNAAPLPLLVVDGSLPVAGETALRRLEKEMNRAGATPQPALPDPGRYPLVPDPPALPWASAN GGPWRHAYMVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26881; Mature: 26881
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPEQSLVIYADFGSPACLAASARADALVAAGVRVDWRAIEPDPRLPVGGVRMSAAEREA CCCCCCEEEEECCCCCCEEEHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHH LERELEVVAGLLVPGEELPRSVPAFRPNARGPVAGYAEAYGAGVADDVRRLLFSAYWSRG HHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCC LDIGSTEVLRRLLAGPVLRGHATSVPLSDFGLAVSPSRGPITMDAFRRIRDWSARWRSLN CCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCEEECCCCCCEEHHHHHHHHHHHHHHHCCC AAPLPLLVVDGSLPVAGETALRRLEKEMNRAGATPQPALPDPGRYPLVPDPPALPWASAN CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGPWRHAYMVGA CCCCEEEEEECC >Mature Secondary Structure MDPEQSLVIYADFGSPACLAASARADALVAAGVRVDWRAIEPDPRLPVGGVRMSAAEREA CCCCCCEEEEECCCCCCEEEHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHH LERELEVVAGLLVPGEELPRSVPAFRPNARGPVAGYAEAYGAGVADDVRRLLFSAYWSRG HHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCC LDIGSTEVLRRLLAGPVLRGHATSVPLSDFGLAVSPSRGPITMDAFRRIRDWSARWRSLN CCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCEEECCCCCCEEHHHHHHHHHHHHHHHCCC AAPLPLLVVDGSLPVAGETALRRLEKEMNRAGATPQPALPDPGRYPLVPDPPALPWASAN CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGPWRHAYMVGA CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA