| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716327
Identifier: 119716327
GI number: 119716327
Start: 2239966
End: 2240400
Strand: Reverse
Name: 119716327
Synonym: Noca_2096
Alternate gene names: NA
Gene position: 2240400-2239966 (Counterclockwise)
Preceding gene: 119716328
Following gene: 119716326
Centisome position: 44.93
GC content: 74.48
Gene sequence:
>435_bases ATGACGCACCAGCTGACCGCCACCCAGGCCCGGGGACTGCTCCGGCTGGGCGACGTGGTGATCCCCGGCGACGACCTGCT CCCCCCGTTCTCCCGGACCGTGGCCGCCTCCGAGGCCGACCGGATGCTGCCCTACCTGAGCGACGCGGACCGCTCGAGCC TGCTGCTGCTGCTCGACGCGTGCGGCCGACTCCCTCGCCCCGCGGTCCGGGCGCTGGTCGCCCTGGCCGCCGGCTGGCGG CGTACGCCGGAGCCGGCCGCGGCGGCGCTGCGGATGGCGCACATCGGCATCAAGGGGGTGGTGCACTCGCTGTACTGGTC CGACCTGCACCGACTGGGCATCCACCAGGTGATCGGCTACGACGCCCGGATCGACGCGGCGGCCTACGAGCGGTCGCTGC CGGCCAGCGAGGTCACGACCGAGGAGGAGCGGTGA
Upstream 100 bases:
>100_bases TTCCCGAACGCACCGGGGATCAACCCGGCGCTGACCATCGCCGCGCTCTCGATCCGGGCCGGCGAGTCGATCCTGGCCGC GGCGCGGAGATGAGGACGAG
Downstream 100 bases:
>100_bases ACGAGGGCTTCGTACGCGCCGAGGTCGCGGGTGTCGTCGGGCGGGCCCGGAGCGGGCAGCGCTCGCTGGGCGCGCTGTCG GTGGCCGAGCGCCTGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTHQLTATQARGLLRLGDVVIPGDDLLPPFSRTVAASEADRMLPYLSDADRSSLLLLLDACGRLPRPAVRALVALAAGWR RTPEPAAAALRMAHIGIKGVVHSLYWSDLHRLGIHQVIGYDARIDAAAYERSLPASEVTTEEER
Sequences:
>Translated_144_residues MTHQLTATQARGLLRLGDVVIPGDDLLPPFSRTVAASEADRMLPYLSDADRSSLLLLLDACGRLPRPAVRALVALAAGWR RTPEPAAAALRMAHIGIKGVVHSLYWSDLHRLGIHQVIGYDARIDAAAYERSLPASEVTTEEER >Mature_143_residues THQLTATQARGLLRLGDVVIPGDDLLPPFSRTVAASEADRMLPYLSDADRSSLLLLLDACGRLPRPAVRALVALAAGWRR TPEPAAAALRMAHIGIKGVVHSLYWSDLHRLGIHQVIGYDARIDAAAYERSLPASEVTTEEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15673; Mature: 15542
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHQLTATQARGLLRLGDVVIPGDDLLPPFSRTVAASEADRMLPYLSDADRSSLLLLLDA CCCCCCHHHHHCHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH CGRLPRPAVRALVALAAGWRRTPEPAAAALRMAHIGIKGVVHSLYWSDLHRLGIHQVIGY HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DARIDAAAYERSLPASEVTTEEER CCCCCHHHHHHCCCHHHCCCCCCC >Mature Secondary Structure THQLTATQARGLLRLGDVVIPGDDLLPPFSRTVAASEADRMLPYLSDADRSSLLLLLDA CCCCCHHHHHCHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH CGRLPRPAVRALVALAAGWRRTPEPAAAALRMAHIGIKGVVHSLYWSDLHRLGIHQVIGY HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DARIDAAAYERSLPASEVTTEEER CCCCCHHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA