| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mshA [H]
Identifier: 119716296
GI number: 119716296
Start: 2209172
End: 2211424
Strand: Direct
Name: mshA [H]
Synonym: Noca_2065
Alternate gene names: 119716296
Gene position: 2209172-2211424 (Clockwise)
Preceding gene: 119716295
Following gene: 119716297
Centisome position: 44.31
GC content: 76.88
Gene sequence:
>2253_bases ATGAAGGCTTCATCCGGTGCGGCCTACGGTCCCGGCATGCACGCGGTCGCCGGCCAGCCCATCGAGGCCCGGTCCCTGGC GCGGACCTGGCGCCGGCTCCGCTTCGTCGGCTCCTGGGCACTCGCGCTCGGCCTGGTCGCGGTCGGGATCCCGCAGGCGG TCGACGTGTCCTGGCACGGCGTGCTGCCGGTGCTCCGGTCGCTGCACTGGCCGGCCGTCCTCGGCCTGGTGGTGCTGTGG TTCCTCGGCCTGGTCGTGCACTCCAGCGTGCTGACCGCCGCGGCGCCCAGCCTCACCCACCGCCGGGCACTGGCGCTGAA CCTGACCGGCAGCGCCGTCGCGAACGTCGTCCCGCTCGGCGGGGCGGCCGGCGTCGAGCTGAACCGCCGGATGATGCGTG CCTGGGGCATCGACGGGCGCCGGTTCGCCGGCTACACCTTCCTCACCAACCTCGTCGACATCGGCGCCAAGCTGGTGCTG CCCGTGATCGCCGTCGTCGCGCTGGCGCACGCGGGCGAGTCGGTGACCGCGTCCCTGCGATACACCGCGGTGCTGGCCGG CCTGGCGTTCGTCGGCCTCGCCGCCTGCGCCGCGGCGGTGCTGGCCAGCCCCCGCTGCACGGTCGGCGTGGGCCGGGCCG TCGAGTGGGTCGCGCGACCGGTGCTGCGCGTGCTGCGACGCACCACCGACCTCGACGTGGCCGGGCCGCTGCTCGACGTA CGCCGGGAGTGTGCGCAGGTCGTCTCCCGCGGCTGGCTGCGGATGTCGCTGGGCATGGGCGGGTACGTCGCGCTCCAGGG CCTCCTGCTCGGGCTGTGCCTGCACGTGACCCACAGCGGCGTCACCTGGACCGAGGTCCTCGCCGGCTTCGCCCTGGAGC GCACGCTGACGGTGCTGCCGGTGACCCCCGGCGGCGTCGGCATCGCCGACGTCGGCCTGGTCGGCATCCTGATGGCGCTC GGCGGCGACCCGGCCGGCGCTGCGGCCGGCGCGGTGCTCTACCGCGGCTTCGTCTTCGCCCTCGAGATCCCGGTGGGCGG TGGCACCCTGGGCGTCTGGCTGCTCGGCCGGCGCCGGGCCGCCCGGCGGGTGCAGCACCCGGCGCGGATCGTGGGGGCCG ATCCGCGCCGGGTCGCGCACGTGACCGACGTGTTCCTGCCGCGGCTGGGCGGGATCGAGACCCACGTCGACGACCTGGTC CGGCACCAGCGCGCGCGGGGCGTCGACGCCGTCGTGCTCACGCCGACCGCGTCGGCGGGCCGCGACCCGGAATGGGTGCA CCGCCTGCCGGCCGCCGCGGCCCGCCGGTTCGCCACCGAGTACGACGCGGTGCACGTCCACGTGTCGATGCTCTCGCCGT ACGGCCTCGGGGTGGCGCGGGCGGCGCTCGCCGCCGGGGTGCCCACGCTGGTGACCGTGCACTCGATGTGGGCGGGCGTG GGCGGCCTGCTCCGGCTCGCGGCCCTCGCGCGGCTGCGGCGCTGGCCGGTCGTCTGGTCCGCGGTCAGCGGCGCCGCCGC CGAGACCTTCCGCGGCTCCCTGCACGGCGGCGACGTCGCCGTGCTCCCGAACGCGATCGACGTCGAGCAGTGGCGCCGGT CGCCGGCGCCGCCCCGCCCGGCGCGCCCGCAGGGGCCGGGCGAGGAGGCGCCGATCACGCTGGTGAGCGTGATGCGGCTG ATGCCTCGCAAGCGACCGCTGCCGCTGATCCGCACGTTCGAGCAGGTGCGCGCGCTCGTCCCGGGCAGGGACGTCCGGCT GCTCGTCGTCGGCGACGGCCCGCTGCGCGGTCGGGTGGAGCGCTACGTCCGGCGCCGCGGGCTGGTCGGGTGCGTGCGGG TCACCGGGCGGATCCCACGGTCGGAGGTGCTCGGCCACCTGCTCTCCGCTTCCGTGTACGTCGCCCCCGCCCCGAAGGAG TCGTTCGGCCTGGCCGCGCTCGAGGCGCGGTGCGCCGGCCTCCCGGTGGTGGCGAACCGCCGCAGCGGGGTCGGCGAGTT CATCCGCGACCGGGTGGACGGCATCCTGGTCGCCGACGACGCCGAGATGGTCGTGGCGCTGGCCGACCTGGTCCTCGACC CCGGGCTCCGCGAGCGGATCGCCGAGCACAACCGGCGGGTGGCCCCGGCCTTCGACTGGTCCGACGCCCTCGACCGGACC GAGGCGCTGTACCGGCTCGCCGGCGAGCGGCTGGCCGCGCCGGCCCGCACCGCCGAGCCGCTCGTCCCGGCGCTGCTCGA GGCCCAGGCCTAG
Upstream 100 bases:
>100_bases GACGACCTCGCCGGGCTCGCCCTCGCGGCCGCGTCGTGGTGGCTCGCGCCGCGGACCGTCGGCGTCCGACGCCGCCCCTC CTGAGCGGCCGCGGCGCTTC
Downstream 100 bases:
>100_bases GCTCGAGCCGATGGCCACGGTCGTGTCCTTCCACGCCCACCCCGACGACGAGGCGCTGCTCACCGGCGGCTGGCTCGCCC AGCGGGCCGCGGCCGGGGAC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MKASSGAAYGPGMHAVAGQPIEARSLARTWRRLRFVGSWALALGLVAVGIPQAVDVSWHGVLPVLRSLHWPAVLGLVVLW FLGLVVHSSVLTAAAPSLTHRRALALNLTGSAVANVVPLGGAAGVELNRRMMRAWGIDGRRFAGYTFLTNLVDIGAKLVL PVIAVVALAHAGESVTASLRYTAVLAGLAFVGLAACAAAVLASPRCTVGVGRAVEWVARPVLRVLRRTTDLDVAGPLLDV RRECAQVVSRGWLRMSLGMGGYVALQGLLLGLCLHVTHSGVTWTEVLAGFALERTLTVLPVTPGGVGIADVGLVGILMAL GGDPAGAAAGAVLYRGFVFALEIPVGGGTLGVWLLGRRRAARRVQHPARIVGADPRRVAHVTDVFLPRLGGIETHVDDLV RHQRARGVDAVVLTPTASAGRDPEWVHRLPAAAARRFATEYDAVHVHVSMLSPYGLGVARAALAAGVPTLVTVHSMWAGV GGLLRLAALARLRRWPVVWSAVSGAAAETFRGSLHGGDVAVLPNAIDVEQWRRSPAPPRPARPQGPGEEAPITLVSVMRL MPRKRPLPLIRTFEQVRALVPGRDVRLLVVGDGPLRGRVERYVRRRGLVGCVRVTGRIPRSEVLGHLLSASVYVAPAPKE SFGLAALEARCAGLPVVANRRSGVGEFIRDRVDGILVADDAEMVVALADLVLDPGLRERIAEHNRRVAPAFDWSDALDRT EALYRLAGERLAAPARTAEPLVPALLEAQA
Sequences:
>Translated_750_residues MKASSGAAYGPGMHAVAGQPIEARSLARTWRRLRFVGSWALALGLVAVGIPQAVDVSWHGVLPVLRSLHWPAVLGLVVLW FLGLVVHSSVLTAAAPSLTHRRALALNLTGSAVANVVPLGGAAGVELNRRMMRAWGIDGRRFAGYTFLTNLVDIGAKLVL PVIAVVALAHAGESVTASLRYTAVLAGLAFVGLAACAAAVLASPRCTVGVGRAVEWVARPVLRVLRRTTDLDVAGPLLDV RRECAQVVSRGWLRMSLGMGGYVALQGLLLGLCLHVTHSGVTWTEVLAGFALERTLTVLPVTPGGVGIADVGLVGILMAL GGDPAGAAAGAVLYRGFVFALEIPVGGGTLGVWLLGRRRAARRVQHPARIVGADPRRVAHVTDVFLPRLGGIETHVDDLV RHQRARGVDAVVLTPTASAGRDPEWVHRLPAAAARRFATEYDAVHVHVSMLSPYGLGVARAALAAGVPTLVTVHSMWAGV GGLLRLAALARLRRWPVVWSAVSGAAAETFRGSLHGGDVAVLPNAIDVEQWRRSPAPPRPARPQGPGEEAPITLVSVMRL MPRKRPLPLIRTFEQVRALVPGRDVRLLVVGDGPLRGRVERYVRRRGLVGCVRVTGRIPRSEVLGHLLSASVYVAPAPKE SFGLAALEARCAGLPVVANRRSGVGEFIRDRVDGILVADDAEMVVALADLVLDPGLRERIAEHNRRVAPAFDWSDALDRT EALYRLAGERLAAPARTAEPLVPALLEAQA >Mature_750_residues MKASSGAAYGPGMHAVAGQPIEARSLARTWRRLRFVGSWALALGLVAVGIPQAVDVSWHGVLPVLRSLHWPAVLGLVVLW FLGLVVHSSVLTAAAPSLTHRRALALNLTGSAVANVVPLGGAAGVELNRRMMRAWGIDGRRFAGYTFLTNLVDIGAKLVL PVIAVVALAHAGESVTASLRYTAVLAGLAFVGLAACAAAVLASPRCTVGVGRAVEWVARPVLRVLRRTTDLDVAGPLLDV RRECAQVVSRGWLRMSLGMGGYVALQGLLLGLCLHVTHSGVTWTEVLAGFALERTLTVLPVTPGGVGIADVGLVGILMAL GGDPAGAAAGAVLYRGFVFALEIPVGGGTLGVWLLGRRRAARRVQHPARIVGADPRRVAHVTDVFLPRLGGIETHVDDLV RHQRARGVDAVVLTPTASAGRDPEWVHRLPAAAARRFATEYDAVHVHVSMLSPYGLGVARAALAAGVPTLVTVHSMWAGV GGLLRLAALARLRRWPVVWSAVSGAAAETFRGSLHGGDVAVLPNAIDVEQWRRSPAPPRPARPQGPGEEAPITLVSVMRL MPRKRPLPLIRTFEQVRALVPGRDVRLLVVGDGPLRGRVERYVRRRGLVGCVRVTGRIPRSEVLGHLLSASVYVAPAPKE SFGLAALEARCAGLPVVANRRSGVGEFIRDRVDGILVADDAEMVVALADLVLDPGLRERIAEHNRRVAPAFDWSDALDRT EALYRLAGERLAAPARTAEPLVPALLEAQA
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Caenorhabditis elegans, GI17532709, Length=397, Percent_Identity=26.7002518891688, Blast_Score=87, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 79414; Mature: 79414
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: PS00132 CARBOXYPEPT_ZN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASSGAAYGPGMHAVAGQPIEARSLARTWRRLRFVGSWALALGLVAVGIPQAVDVSWHG CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VLPVLRSLHWPAVLGLVVLWFLGLVVHSSVLTAAAPSLTHRRALALNLTGSAVANVVPLG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCHHHHHHCCCC GAAGVELNRRMMRAWGIDGRRFAGYTFLTNLVDIGAKLVLPVIAVVALAHAGESVTASLR CCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YTAVLAGLAFVGLAACAAAVLASPRCTVGVGRAVEWVARPVLRVLRRTTDLDVAGPLLDV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RRECAQVVSRGWLRMSLGMGGYVALQGLLLGLCLHVTHSGVTWTEVLAGFALERTLTVLP HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEE VTPGGVGIADVGLVGILMALGGDPAGAAAGAVLYRGFVFALEIPVGGGTLGVWLLGRRRA ECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHH ARRVQHPARIVGADPRRVAHVTDVFLPRLGGIETHVDDLVRHQRARGVDAVVLTPTASAG HHHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC RDPEWVHRLPAAAARRFATEYDAVHVHVSMLSPYGLGVARAALAAGVPTLVTVHSMWAGV CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHH GGLLRLAALARLRRWPVVWSAVSGAAAETFRGSLHGGDVAVLPNAIDVEQWRRSPAPPRP HHHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCCCEEECCCCCCHHHHHCCCCCCCC ARPQGPGEEAPITLVSVMRLMPRKRPLPLIRTFEQVRALVPGRDVRLLVVGDGPLRGRVE CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH RYVRRRGLVGCVRVTGRIPRSEVLGHLLSASVYVAPAPKESFGLAALEARCAGLPVVANR HHHHHCCCEEEEHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEECC RSGVGEFIRDRVDGILVADDAEMVVALADLVLDPGLRERIAEHNRRVAPAFDWSDALDRT CCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHH EALYRLAGERLAAPARTAEPLVPALLEAQA HHHHHHHHHHHCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKASSGAAYGPGMHAVAGQPIEARSLARTWRRLRFVGSWALALGLVAVGIPQAVDVSWHG CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VLPVLRSLHWPAVLGLVVLWFLGLVVHSSVLTAAAPSLTHRRALALNLTGSAVANVVPLG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCHHHHHHCCCC GAAGVELNRRMMRAWGIDGRRFAGYTFLTNLVDIGAKLVLPVIAVVALAHAGESVTASLR CCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YTAVLAGLAFVGLAACAAAVLASPRCTVGVGRAVEWVARPVLRVLRRTTDLDVAGPLLDV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RRECAQVVSRGWLRMSLGMGGYVALQGLLLGLCLHVTHSGVTWTEVLAGFALERTLTVLP HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEE VTPGGVGIADVGLVGILMALGGDPAGAAAGAVLYRGFVFALEIPVGGGTLGVWLLGRRRA ECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHH ARRVQHPARIVGADPRRVAHVTDVFLPRLGGIETHVDDLVRHQRARGVDAVVLTPTASAG HHHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC RDPEWVHRLPAAAARRFATEYDAVHVHVSMLSPYGLGVARAALAAGVPTLVTVHSMWAGV CCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHH GGLLRLAALARLRRWPVVWSAVSGAAAETFRGSLHGGDVAVLPNAIDVEQWRRSPAPPRP HHHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCCCEEECCCCCCHHHHHCCCCCCCC ARPQGPGEEAPITLVSVMRLMPRKRPLPLIRTFEQVRALVPGRDVRLLVVGDGPLRGRVE CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH RYVRRRGLVGCVRVTGRIPRSEVLGHLLSASVYVAPAPKESFGLAALEARCAGLPVVANR HHHHHCCCEEEEHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEECC RSGVGEFIRDRVDGILVADDAEMVVALADLVLDPGLRERIAEHNRRVAPAFDWSDALDRT CCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHH EALYRLAGERLAAPARTAEPLVPALLEAQA HHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA