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The map label for this gene is ytfL [C]

Identifier: 119716271

GI number: 119716271

Start: 2183254

End: 2184510

Strand: Reverse

Name: ytfL [C]

Synonym: Noca_2040

Alternate gene names: 119716271

Gene position: 2184510-2183254 (Counterclockwise)

Preceding gene: 119716272

Following gene: 119716270

Centisome position: 43.81

GC content: 73.43

Gene sequence:

>1257_bases
GTGGACACCCAGACCCTGATCAACCTCGCCCTGGTCCTGTTGTTCATCCTGGTCGGCGGGGTGTTCGCCGGCACCGAGAT
CGCGCTGGTCTCGCTGCGCGAGGGCCAGATCAACACGCTCGCCTCGCGCGGCGCGCGCGGCGCCAGGGTGGCCTCCGTGG
CCCGCGACCCGAACCGGTTCCTCGCCGCGGTCCAGATCGGCGTCACGCTGGCCGGCTTCTTCTCCGCGGCGTACGGCGCC
TCCACCCTCGCGCCCGACTTCGCGCCGGTGCTCGAGCACGCCGGGCTCGGCGCGGACGCGGCCGACACCGCCGCGCTGGT
GCTGCTGACACTGTTCATCGCCTACCTCTCCCTGGTGTTCAGCGAGCTGGTCCCCAAGCGGCTCGCCCTCCAGCGCGCGG
CCGGCGTGTCCTACCTCGTCGGCGCGCCGCTGGACCGGTTCGCGACCCTCATGCGCCCGGTGGTGTGGCTGCTCTCGGTC
TCCACCAACGCGGTGGTCCGCCTCTTCGGCGGCGACCCCGGCGCGGCCGCCGAGGATCTCAGCGACGAGGAGCTGCGCTA
CCTGGTCGACCAGCACGAGGGCCTCGCCGAGGACGAGCGGCGGATCCTCGCCGACGTCTTCGACGCCGGCGACCGGTCCC
TGAGCGAGGTGATGCGGCCCCGCGGCGACGTGACGTTCCTGGCCGGCGACGCCACGGTCGCCGACGCGATCGCCATCGCG
CTGACCAGCCCGTACTCCCGCTACCCCGTCACCGGCACCGGCCACGACGACATCCGCGGCTTCCTGCACGTGCGCGACCT
GCTGGGCGCCGACCCCCGCAAGCGGGTGCGCTCGATCACCCGCAAGATCCTGCACCTGCCCGCCACCAACCGGGTGCTCC
CCTCGCTCTCCCGGATGCGGGCCGAGGGCAGCCACATCGCCGTCGTCGTCGACGAGTACGGCGGCACCGACGGCATCGTC
ACCCTCGAGGACCTGGTCGAGGAGCTGGTCGGCGACATCCACGACGAGTACGACGAGCGGGCGAGCGTGGCGGCCGGCGA
GGTGGACGCGGGGCTGACCATCGAGGAGTTCGGCGAGCGCACCGGCGTCGAGCTCGAGGACGGCCCCTACGAGACCGCCG
CCGGGTACGTCGTGCACCGGCTCGGCCGGCTCGCCGTGGCCGGGGACGTGGTGGCCGTGGGCGAGCACGAGATCGAGGTC
GCGACCGTCGACAAGCACCGGATCACCCGGCTGCGGGTGCGCCCGCGCGAGTCCTGA

Upstream 100 bases:

>100_bases
CCCCGGCTCGGTCGCCTACGTCACCACCGACAACGGGAACGGGAACGACGCGATCCTCGTTGTCAGACCCACACGATGAG
AGAGCGGTGACGACACCCCG

Downstream 100 bases:

>100_bases
GGAACTCTCAAGTCGGCCGGCAGCCCGGCCGATGTGACCTCTCGTGATCTCGGTGCTTCGCTCTGCCCTCTGCTCGCTGT
CCCTGGCCCTCGCCCTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MDTQTLINLALVLLFILVGGVFAGTEIALVSLREGQINTLASRGARGARVASVARDPNRFLAAVQIGVTLAGFFSAAYGA
STLAPDFAPVLEHAGLGADAADTAALVLLTLFIAYLSLVFSELVPKRLALQRAAGVSYLVGAPLDRFATLMRPVVWLLSV
STNAVVRLFGGDPGAAAEDLSDEELRYLVDQHEGLAEDERRILADVFDAGDRSLSEVMRPRGDVTFLAGDATVADAIAIA
LTSPYSRYPVTGTGHDDIRGFLHVRDLLGADPRKRVRSITRKILHLPATNRVLPSLSRMRAEGSHIAVVVDEYGGTDGIV
TLEDLVEELVGDIHDEYDERASVAAGEVDAGLTIEEFGERTGVELEDGPYETAAGYVVHRLGRLAVAGDVVAVGEHEIEV
ATVDKHRITRLRVRPRES

Sequences:

>Translated_418_residues
MDTQTLINLALVLLFILVGGVFAGTEIALVSLREGQINTLASRGARGARVASVARDPNRFLAAVQIGVTLAGFFSAAYGA
STLAPDFAPVLEHAGLGADAADTAALVLLTLFIAYLSLVFSELVPKRLALQRAAGVSYLVGAPLDRFATLMRPVVWLLSV
STNAVVRLFGGDPGAAAEDLSDEELRYLVDQHEGLAEDERRILADVFDAGDRSLSEVMRPRGDVTFLAGDATVADAIAIA
LTSPYSRYPVTGTGHDDIRGFLHVRDLLGADPRKRVRSITRKILHLPATNRVLPSLSRMRAEGSHIAVVVDEYGGTDGIV
TLEDLVEELVGDIHDEYDERASVAAGEVDAGLTIEEFGERTGVELEDGPYETAAGYVVHRLGRLAVAGDVVAVGEHEIEV
ATVDKHRITRLRVRPRES
>Mature_418_residues
MDTQTLINLALVLLFILVGGVFAGTEIALVSLREGQINTLASRGARGARVASVARDPNRFLAAVQIGVTLAGFFSAAYGA
STLAPDFAPVLEHAGLGADAADTAALVLLTLFIAYLSLVFSELVPKRLALQRAAGVSYLVGAPLDRFATLMRPVVWLLSV
STNAVVRLFGGDPGAAAEDLSDEELRYLVDQHEGLAEDERRILADVFDAGDRSLSEVMRPRGDVTFLAGDATVADAIAIA
LTSPYSRYPVTGTGHDDIRGFLHVRDLLGADPRKRVRSITRKILHLPATNRVLPSLSRMRAEGSHIAVVVDEYGGTDGIV
TLEDLVEELVGDIHDEYDERASVAAGEVDAGLTIEEFGERTGVELEDGPYETAAGYVVHRLGRLAVAGDVVAVGEHEIEV
ATVDKHRITRLRVRPRES

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=393, Percent_Identity=28.2442748091603, Blast_Score=190, Evalue=2e-48,
Organism=Escherichia coli, GI1790664, Length=427, Percent_Identity=24.5901639344262, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI145693175, Length=412, Percent_Identity=25.9708737864078, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786879, Length=264, Percent_Identity=31.0606060606061, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87082033, Length=270, Percent_Identity=28.5185185185185, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788119, Length=263, Percent_Identity=25.4752851711027, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324512, Length=340, Percent_Identity=25, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 44722; Mature: 44722

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQTLINLALVLLFILVGGVFAGTEIALVSLREGQINTLASRGARGARVASVARDPNRF
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHCCHHHH
LAAVQIGVTLAGFFSAAYGASTLAPDFAPVLEHAGLGADAADTAALVLLTLFIAYLSLVF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SELVPKRLALQRAAGVSYLVGAPLDRFATLMRPVVWLLSVSTNAVVRLFGGDPGAAAEDL
HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
SDEELRYLVDQHEGLAEDERRILADVFDAGDRSLSEVMRPRGDVTFLAGDATVADAIAIA
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHH
LTSPYSRYPVTGTGHDDIRGFLHVRDLLGADPRKRVRSITRKILHLPATNRVLPSLSRMR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AEGSHIAVVVDEYGGTDGIVTLEDLVEELVGDIHDEYDERASVAAGEVDAGLTIEEFGER
CCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC
TGVELEDGPYETAAGYVVHRLGRLAVAGDVVAVGEHEIEVATVDKHRITRLRVRPRES
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHHEEEECCCCCC
>Mature Secondary Structure
MDTQTLINLALVLLFILVGGVFAGTEIALVSLREGQINTLASRGARGARVASVARDPNRF
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHCCHHHH
LAAVQIGVTLAGFFSAAYGASTLAPDFAPVLEHAGLGADAADTAALVLLTLFIAYLSLVF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SELVPKRLALQRAAGVSYLVGAPLDRFATLMRPVVWLLSVSTNAVVRLFGGDPGAAAEDL
HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
SDEELRYLVDQHEGLAEDERRILADVFDAGDRSLSEVMRPRGDVTFLAGDATVADAIAIA
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHH
LTSPYSRYPVTGTGHDDIRGFLHVRDLLGADPRKRVRSITRKILHLPATNRVLPSLSRMR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AEGSHIAVVVDEYGGTDGIVTLEDLVEELVGDIHDEYDERASVAAGEVDAGLTIEEFGER
CCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC
TGVELEDGPYETAAGYVVHRLGRLAVAGDVVAVGEHEIEVATVDKHRITRLRVRPRES
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]