Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716257

Identifier: 119716257

GI number: 119716257

Start: 2170202

End: 2170924

Strand: Reverse

Name: 119716257

Synonym: Noca_2025

Alternate gene names: NA

Gene position: 2170924-2170202 (Counterclockwise)

Preceding gene: 119716261

Following gene: 119716256

Centisome position: 43.54

GC content: 66.67

Gene sequence:

>723_bases
ATGACGGTTCTCGATGCCGAGGCGGCGGTCGACAAGTTCAACGCACCGCTCTACACCCAGGCCGAAGCATCCCGCTTCCT
CGGCCTCCCTGAGTCGACCTTCCGCAACTGGGCACGCGGCTACCACAGCATCGTCCGGGGTCGTGAGGTGATGGGCGCTC
CCATCCTCACGGCCCTGAACAACGGACACCGGGGGGCGAGCATCCCGTTCGTCGGCCTCGCCGAGGGCTATGCCCTGACG
GCGATCCGCAAGTCCGGCGTCCCGCTGCAGCGGATCCGGCCAGCTCTCGAGCAGCTGAACACGGAGTTCGGGCTCACGCA
CGCCCTGGCGTCGAAGAAGCTCTACACGGACGGCGCCGAAGTGCTTTTCGACTACGCCGAGAGGACCGGCGGAGACGAGC
GTGACGCCGTCCGCGAACTGGTGGTCGTCAGGAACAACCAGCGGGTGTTCGCCGAGGTCGTCGAGGACTACCTGCATCGC
ATCGAGTTCGGCGCCGACGGGTTCGCAACGGCAGTTCCACTGCCCGGATTCAGGAAGGCAGAGCTCGTCGCCGACGTTCG
GCGAGCTTTCGGCCAGCCTGTGTTCCGACGCGGCGGTGTCCGCCTCGAGGACGCGGTCTCCCTGTTCAAGGCGGAGCGAG
ACATCAACGTCGTCTCCGAGGAGTACGGCATCCCGCGCGACGAGCTCGAAGACGTGCTGGCCGTCCTGATCAGGACCGCC
TGA

Upstream 100 bases:

>100_bases
TCCGTTGTGGTGCCGTCGACGACCGTCGCGGCTTGGCGCGGTTGTCGGCGTCGTGCGCCATGATGGGGTCAGTTCGCGAG
GTCAGAAAGGAGGGTCGACG

Downstream 100 bases:

>100_bases
CTCAGCGGCCACGATGACCGGTCTGCACTTCTTCGTCGACCGAAGCCTGGGCCGACGTCAGGTGCCGGATCTGCTCCGGG
CCGATGGCTGGGACCTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTVLDAEAAVDKFNAPLYTQAEASRFLGLPESTFRNWARGYHSIVRGREVMGAPILTALNNGHRGASIPFVGLAEGYALT
AIRKSGVPLQRIRPALEQLNTEFGLTHALASKKLYTDGAEVLFDYAERTGGDERDAVRELVVVRNNQRVFAEVVEDYLHR
IEFGADGFATAVPLPGFRKAELVADVRRAFGQPVFRRGGVRLEDAVSLFKAERDINVVSEEYGIPRDELEDVLAVLIRTA

Sequences:

>Translated_240_residues
MTVLDAEAAVDKFNAPLYTQAEASRFLGLPESTFRNWARGYHSIVRGREVMGAPILTALNNGHRGASIPFVGLAEGYALT
AIRKSGVPLQRIRPALEQLNTEFGLTHALASKKLYTDGAEVLFDYAERTGGDERDAVRELVVVRNNQRVFAEVVEDYLHR
IEFGADGFATAVPLPGFRKAELVADVRRAFGQPVFRRGGVRLEDAVSLFKAERDINVVSEEYGIPRDELEDVLAVLIRTA
>Mature_239_residues
TVLDAEAAVDKFNAPLYTQAEASRFLGLPESTFRNWARGYHSIVRGREVMGAPILTALNNGHRGASIPFVGLAEGYALTA
IRKSGVPLQRIRPALEQLNTEFGLTHALASKKLYTDGAEVLFDYAERTGGDERDAVRELVVVRNNQRVFAEVVEDYLHRI
EFGADGFATAVPLPGFRKAELVADVRRAFGQPVFRRGGVRLEDAVSLFKAERDINVVSEEYGIPRDELEDVLAVLIRTA

Specific function: Unknown

COG id: COG2442

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26516; Mature: 26385

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLDAEAAVDKFNAPLYTQAEASRFLGLPESTFRNWARGYHSIVRGREVMGAPILTALN
CCCCCHHHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NGHRGASIPFVGLAEGYALTAIRKSGVPLQRIRPALEQLNTEFGLTHALASKKLYTDGAE
CCCCCCCCCEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VLFDYAERTGGDERDAVRELVVVRNNQRVFAEVVEDYLHRIEFGADGFATAVPLPGFRKA
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
ELVADVRRAFGQPVFRRGGVRLEDAVSLFKAERDINVVSEEYGIPRDELEDVLAVLIRTA
HHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVLDAEAAVDKFNAPLYTQAEASRFLGLPESTFRNWARGYHSIVRGREVMGAPILTALN
CCCCHHHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NGHRGASIPFVGLAEGYALTAIRKSGVPLQRIRPALEQLNTEFGLTHALASKKLYTDGAE
CCCCCCCCCEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VLFDYAERTGGDERDAVRELVVVRNNQRVFAEVVEDYLHRIEFGADGFATAVPLPGFRKA
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
ELVADVRRAFGQPVFRRGGVRLEDAVSLFKAERDINVVSEEYGIPRDELEDVLAVLIRTA
HHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA