| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is fbpB [H]
Identifier: 119716253
GI number: 119716253
Start: 2165981
End: 2167549
Strand: Reverse
Name: fbpB [H]
Synonym: Noca_2021
Alternate gene names: 119716253
Gene position: 2167549-2165981 (Counterclockwise)
Preceding gene: 119716254
Following gene: 119716252
Centisome position: 43.47
GC content: 75.27
Gene sequence:
>1569_bases GTGCAGCTGCCGCTGCCCGGGACGGAGCCGGCAGCCCGCACGCACCCGCAGCGTCCCGAGCCCGCTCCGCCATTCCTCCT GGCGCTGGGCGCGCTGGTCACCGTCGCCTGCCTGATCCCGCTCGGGTACGTCGTGTGGTCGGTCGCCGACGTCGGCCTGG CCGAGGCCCGCGACTACCTGTTCCGGCCCCGGATCGGCGAGCTGCTGTGGAACACCTCCCGGCTGCTGGTCGGCGGCGTG GCCCTCAGCGTCGTGCTCGGCGTCGGGGGTGCCTGGCTGGTCGAGCGCACCGACGTCCCCGGCCGGGGCTGGTGGCACGG CTTGATGTGCGCGCCGCTCGCCGTACCCGCCTTCGTCAACGGCTACGGCTGGGTCTCGATGACGCACGCGGTGCAGAGCT ACGGCGGCGCCGCGCTCGTCGTCAGCCTGTCGTACTTCCCGTTCGTCTACCTGCCCACCGTCGCGGCCCTGCGCCGCCTC GACCCGAGCCTGGAGGAGGTCAGCGCCTCCCTGGGACAGCGGCCGCTCGCGACGTTCCTGCGGGTGGTGCTGCCCGCGAT CAGCCCCGCCGTGCTCGGCGGCGCGCTGCTGGTCGGCCTGCACCTGCTGGCGGAGTACGGCGCCCTGCAGCTGCTCAACT ACCCCACCCTGACCACGGCGATCCTGCAGCAGTACGGCACCTCCTTCAACGGCCCGGCCGCCAGCCTGCTCGCGCTCGTC CTCGTCGTGTTCTGCCTGGCGCTGCTGGCCGTCGAGCTGCTGCTGCGTGGCCGCGGCCGCCGGGCCCGGGTCGGCTCGGG CGCCGCCCGCGCCGCCGACCCGCACCGCCTCGGCCGCGGGCGGCTCCCGGCGGCGGGTGGGCTCGCCGCGCTCGTCGTAC TCGCCCTCGGCGTGCCGCTGCTCAACCTGGCCCGGTGGCTGGTGCGCGGCTCCTCGACCCGGTGGGACCTGCCCGACCTG ACCTCGGCCATCGCGACCTCCGTCGGCCTCGCCGTGCTCGCCGGTCTGGTCGCCACGGCCGCGGCGACACCGGTCGCGTG GCTCTCGGTGCGGCACCGCGGCGGGCTGACCACGACGCTGGAGCGGGCCACCTACACCGCCAGCGCGATGCCCGGCATCG TGGTCGCGCTCGCCCTGGTCACGGTGTCGATCCGTGCCGTCCCCGCGCTCTACCAGACCGTGCCGCTGCTGGTGATCGGC TACGTCATCCTGTTCCTGCCGCGCGCGGTCGTGAGCCTCCGGCCGACCATGGAGCTCGCGCCGCCGGTGCTCGAGGACGT GGCGCGCTCGCTGGGCTGCGGCCGCACCGGCGTCGGCCTCCGGGTGACCGCGCCACTCATCGCGCCCGGCCTCGCGGCCG GCTTCGCGCTCGTGTCCCTGGCCGTGTCGACCGAGCTGACCGCCACTCTGCTGCTCGCCCCGATCGGCACCGACACGCTC TCCACGGAGTTCTGGTCCAAGGCCTCCTCCGTCGCGTACGGCGCGGCCGCGCCGTACGCCCTGGCGCTCGTGGTGCTCTC GGTCCCGGCGACCTGGCTGCTCAGCCGAGTCACGGTGGGTGCGCGATGA
Upstream 100 bases:
>100_bases CGTTCGCCGAGCTCGATCCGCCCCAGGTCAACGTCTCGGACCTCGACGGCAAGGCCGTGGTGGACCTGATGACCGAGGTC GGGTTCCTCTGAGCGACCTG
Downstream 100 bases:
>100_bases CCAAGGCGCTGGAGGTCAGCGGCCTCACCGTCGGCTACGGGGACCACACGGTCCTGCACGCGGTCGACCTCGTCGTCGAG GACGGCATCACGGCGGTGCT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein sfuB [H]
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MQLPLPGTEPAARTHPQRPEPAPPFLLALGALVTVACLIPLGYVVWSVADVGLAEARDYLFRPRIGELLWNTSRLLVGGV ALSVVLGVGGAWLVERTDVPGRGWWHGLMCAPLAVPAFVNGYGWVSMTHAVQSYGGAALVVSLSYFPFVYLPTVAALRRL DPSLEEVSASLGQRPLATFLRVVLPAISPAVLGGALLVGLHLLAEYGALQLLNYPTLTTAILQQYGTSFNGPAASLLALV LVVFCLALLAVELLLRGRGRRARVGSGAARAADPHRLGRGRLPAAGGLAALVVLALGVPLLNLARWLVRGSSTRWDLPDL TSAIATSVGLAVLAGLVATAAATPVAWLSVRHRGGLTTTLERATYTASAMPGIVVALALVTVSIRAVPALYQTVPLLVIG YVILFLPRAVVSLRPTMELAPPVLEDVARSLGCGRTGVGLRVTAPLIAPGLAAGFALVSLAVSTELTATLLLAPIGTDTL STEFWSKASSVAYGAAAPYALALVVLSVPATWLLSRVTVGAR
Sequences:
>Translated_522_residues MQLPLPGTEPAARTHPQRPEPAPPFLLALGALVTVACLIPLGYVVWSVADVGLAEARDYLFRPRIGELLWNTSRLLVGGV ALSVVLGVGGAWLVERTDVPGRGWWHGLMCAPLAVPAFVNGYGWVSMTHAVQSYGGAALVVSLSYFPFVYLPTVAALRRL DPSLEEVSASLGQRPLATFLRVVLPAISPAVLGGALLVGLHLLAEYGALQLLNYPTLTTAILQQYGTSFNGPAASLLALV LVVFCLALLAVELLLRGRGRRARVGSGAARAADPHRLGRGRLPAAGGLAALVVLALGVPLLNLARWLVRGSSTRWDLPDL TSAIATSVGLAVLAGLVATAAATPVAWLSVRHRGGLTTTLERATYTASAMPGIVVALALVTVSIRAVPALYQTVPLLVIG YVILFLPRAVVSLRPTMELAPPVLEDVARSLGCGRTGVGLRVTAPLIAPGLAAGFALVSLAVSTELTATLLLAPIGTDTL STEFWSKASSVAYGAAAPYALALVVLSVPATWLLSRVTVGAR >Mature_522_residues MQLPLPGTEPAARTHPQRPEPAPPFLLALGALVTVACLIPLGYVVWSVADVGLAEARDYLFRPRIGELLWNTSRLLVGGV ALSVVLGVGGAWLVERTDVPGRGWWHGLMCAPLAVPAFVNGYGWVSMTHAVQSYGGAALVVSLSYFPFVYLPTVAALRRL DPSLEEVSASLGQRPLATFLRVVLPAISPAVLGGALLVGLHLLAEYGALQLLNYPTLTTAILQQYGTSFNGPAASLLALV LVVFCLALLAVELLLRGRGRRARVGSGAARAADPHRLGRGRLPAAGGLAALVVLALGVPLLNLARWLVRGSSTRWDLPDL TSAIATSVGLAVLAGLVATAAATPVAWLSVRHRGGLTTTLERATYTASAMPGIVVALALVTVSIRAVPALYQTVPLLVIG YVILFLPRAVVSLRPTMELAPPVLEDVARSLGCGRTGVGLRVTAPLIAPGLAAGFALVSLAVSTELTATLLLAPIGTDTL STEFWSKASSVAYGAAAPYALALVVLSVPATWLLSRVTVGAR
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=265, Percent_Identity=27.1698113207547, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 54263; Mature: 54263
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPLPGTEPAARTHPQRPEPAPPFLLALGALVTVACLIPLGYVVWSVADVGLAEARDYL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRPRIGELLWNTSRLLVGGVALSVVLGVGGAWLVERTDVPGRGWWHGLMCAPLAVPAFVN HCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHC GYGWVSMTHAVQSYGGAALVVSLSYFPFVYLPTVAALRRLDPSLEEVSASLGQRPLATFL CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH RVVLPAISPAVLGGALLVGLHLLAEYGALQLLNYPTLTTAILQQYGTSFNGPAASLLALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHH LVVFCLALLAVELLLRGRGRRARVGSGAARAADPHRLGRGRLPAAGGLAALVVLALGVPL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH LNLARWLVRGSSTRWDLPDLTSAIATSVGLAVLAGLVATAAATPVAWLSVRHRGGLTTTL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHH ERATYTASAMPGIVVALALVTVSIRAVPALYQTVPLLVIGYVILFLPRAVVSLRPTMELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC PPVLEDVARSLGCGRTGVGLRVTAPLIAPGLAAGFALVSLAVSTELTATLLLAPIGTDTL CHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH STEFWSKASSVAYGAAAPYALALVVLSVPATWLLSRVTVGAR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQLPLPGTEPAARTHPQRPEPAPPFLLALGALVTVACLIPLGYVVWSVADVGLAEARDYL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRPRIGELLWNTSRLLVGGVALSVVLGVGGAWLVERTDVPGRGWWHGLMCAPLAVPAFVN HCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHC GYGWVSMTHAVQSYGGAALVVSLSYFPFVYLPTVAALRRLDPSLEEVSASLGQRPLATFL CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH RVVLPAISPAVLGGALLVGLHLLAEYGALQLLNYPTLTTAILQQYGTSFNGPAASLLALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHH LVVFCLALLAVELLLRGRGRRARVGSGAARAADPHRLGRGRLPAAGGLAALVVLALGVPL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH LNLARWLVRGSSTRWDLPDLTSAIATSVGLAVLAGLVATAAATPVAWLSVRHRGGLTTTL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHH ERATYTASAMPGIVVALALVTVSIRAVPALYQTVPLLVIGYVILFLPRAVVSLRPTMELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC PPVLEDVARSLGCGRTGVGLRVTAPLIAPGLAAGFALVSLAVSTELTATLLLAPIGTDTL CHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH STEFWSKASSVAYGAAAPYALALVVLSVPATWLLSRVTVGAR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]