| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yecE [C]
Identifier: 119716197
GI number: 119716197
Start: 2095048
End: 2095896
Strand: Direct
Name: yecE [C]
Synonym: Noca_1965
Alternate gene names: 119716197
Gene position: 2095048-2095896 (Clockwise)
Preceding gene: 119716196
Following gene: 119716200
Centisome position: 42.02
GC content: 73.03
Gene sequence:
>849_bases ATGGGTCGACAGCCGGGCGGGTCGGGTGACATCCGGGTCGGCATCTCCGGCTGGAGCTACGCCGGCTGGCGCGGCGACTT CTACCCGCGCGGCCTGCCCCAGCGCCAGGAGCTCGCCTACGCGGCCGAGCGGATGGGCTCGGTGGAGATCAACGGCTCGT TCTACAGCCTGCAGCGGCCGACGTCGTACGCAGCCTGGCGCGAGCAGACGCCCGAGGACTTCGTCTTCGCGGTCAAGGGC GGCCGGTACGTCACCCACATGAAACGGCTGCGCGACGTCGAGGGCCCGCTGGCGAACTTCTTCGCCTCCGGCGTGCTCGC CCTCGGACCCAAGCTGGGCCCGGTGCTCTGGCAGCTCCCGGAGCGGCTCCGGTTCGACGCCGACCTGCTCGCGTCGTTCT TCCGGCTGCTGCCCCGGACCCTGGGCGAGGTGGCCGCCCTGGCGGAGCGGCACGACGCCAAGGTGCCGGAGGACCGCGCC CTGACCAGCGTCCCGGACGGCCTCGAGGCCCAGCGGGTCCGGCACGCCCTGGAGTTCCGGAGTCCCTCGTTCTGCACCGA GGAGGCGTTCGCGCTGCTGCGCGAGCACGACGTCGCCTGCGTGGTCGCGGACACCGCCGGCCGGTGGCCGCTGGCCGAAG CGGTCACCTCCGACCTCGTCTACGTCCGCCTGCACGGCGACCAGGAGCTCTACACCAGCGGGTACGGCGACGCCGCCCTC GACGCGTGGGCCGAGAAGTGCCGCGGCTGGGCCGAGCGCCCCGACGTCGCGCAGGTGGTCGTCTACTTCGACAACGACGC GAAGGGCTTCGCGCCCCACGACGCCCTCCGGCTGATCGACCGGCTCTGA
Upstream 100 bases:
>100_bases GAGTGGGGCGACTCCGCGGCGTCCTGGTTGGGGTCGATCACGCAGGACTCGCCGTACCGGCCGAGGTGAGCTCCCGCCAC CGGAGGGGTACCCACCGCGC
Downstream 100 bases:
>100_bases CCCGTTGCGGGGCCGCCTACTAGGCTCCCGTCCGCACGGGGCGGTAGCTCAGTCGGTCAGAGCAGAGGACTCATAATCCT TGGGTCGTGGGTTCGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGRQPGGSGDIRVGISGWSYAGWRGDFYPRGLPQRQELAYAAERMGSVEINGSFYSLQRPTSYAAWREQTPEDFVFAVKG GRYVTHMKRLRDVEGPLANFFASGVLALGPKLGPVLWQLPERLRFDADLLASFFRLLPRTLGEVAALAERHDAKVPEDRA LTSVPDGLEAQRVRHALEFRSPSFCTEEAFALLREHDVACVVADTAGRWPLAEAVTSDLVYVRLHGDQELYTSGYGDAAL DAWAEKCRGWAERPDVAQVVVYFDNDAKGFAPHDALRLIDRL
Sequences:
>Translated_282_residues MGRQPGGSGDIRVGISGWSYAGWRGDFYPRGLPQRQELAYAAERMGSVEINGSFYSLQRPTSYAAWREQTPEDFVFAVKG GRYVTHMKRLRDVEGPLANFFASGVLALGPKLGPVLWQLPERLRFDADLLASFFRLLPRTLGEVAALAERHDAKVPEDRA LTSVPDGLEAQRVRHALEFRSPSFCTEEAFALLREHDVACVVADTAGRWPLAEAVTSDLVYVRLHGDQELYTSGYGDAAL DAWAEKCRGWAERPDVAQVVVYFDNDAKGFAPHDALRLIDRL >Mature_281_residues GRQPGGSGDIRVGISGWSYAGWRGDFYPRGLPQRQELAYAAERMGSVEINGSFYSLQRPTSYAAWREQTPEDFVFAVKGG RYVTHMKRLRDVEGPLANFFASGVLALGPKLGPVLWQLPERLRFDADLLASFFRLLPRTLGEVAALAERHDAKVPEDRAL TSVPDGLEAQRVRHALEFRSPSFCTEEAFALLREHDVACVVADTAGRWPLAEAVTSDLVYVRLHGDQELYTSGYGDAALD AWAEKCRGWAERPDVAQVVVYFDNDAKGFAPHDALRLIDRL
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31402; Mature: 31270
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQPGGSGDIRVGISGWSYAGWRGDFYPRGLPQRQELAYAAERMGSVEINGSFYSLQRP CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEECCC TSYAAWREQTPEDFVFAVKGGRYVTHMKRLRDVEGPLANFFASGVLALGPKLGPVLWQLP CHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH ERLRFDADLLASFFRLLPRTLGEVAALAERHDAKVPEDRALTSVPDGLEAQRVRHALEFR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC SPSFCTEEAFALLREHDVACVVADTAGRWPLAEAVTSDLVYVRLHGDQELYTSGYGDAAL CCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCEEEEEEECCCHHHHCCCCHHHH DAWAEKCRGWAERPDVAQVVVYFDNDAKGFAPHDALRLIDRL HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure GRQPGGSGDIRVGISGWSYAGWRGDFYPRGLPQRQELAYAAERMGSVEINGSFYSLQRP CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEECCC TSYAAWREQTPEDFVFAVKGGRYVTHMKRLRDVEGPLANFFASGVLALGPKLGPVLWQLP CHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH ERLRFDADLLASFFRLLPRTLGEVAALAERHDAKVPEDRALTSVPDGLEAQRVRHALEFR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC SPSFCTEEAFALLREHDVACVVADTAGRWPLAEAVTSDLVYVRLHGDQELYTSGYGDAAL CCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCEEEEEEECCCHHHHCCCCHHHH DAWAEKCRGWAERPDVAQVVVYFDNDAKGFAPHDALRLIDRL HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA