| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is znuB [C]
Identifier: 119716167
GI number: 119716167
Start: 2064963
End: 2065976
Strand: Reverse
Name: znuB [C]
Synonym: Noca_1935
Alternate gene names: 119716167
Gene position: 2065976-2064963 (Counterclockwise)
Preceding gene: 119716168
Following gene: 119716166
Centisome position: 41.44
GC content: 73.27
Gene sequence:
>1014_bases GTGAGCGACTACCTGGACCTGCTCGGCCTGCCGTTCATGCAGCGGGCGATCATCGCGGCGCTGTTCACCGGCCTGGCGGC CCCGGTCGTCGGCACCTACCTGGTGCAGCGCCGGCTCGCACTGATGGGCGACGGCATCGGTCACGTCGCGGTGACCGGCG TCGCGCTCGGCCTGCTGACCGGCGTCTCGCCGGTCTGGATGGCGGTGCTGGTCTCGGTGCTCGGCGCGATCCTGATCGAG GTGATCCGCGAGCGCGGCCACGCCAACGGCGACGTGGCGCTCGCACTCCTCTTCTACGGCGGTCTCGCGGGCGGCGTGCT GATCACCGGCCTCGCCGGCCAGAGCGGGGCGCGGCTGCAGACCTACCTCTTCGGGTCCATCACCACGATGTCGGAGGCCG ACGTCCTGGTGACGATGGCGCTCGCGGGCGTCGTCGTCCTGCTGGGCGTCGGACTCGCCCCCCAGCTGTTCGCGGTCGCG CAGGACCAGGAGTTCGCCCGGGTGGCCGGGCTCAACATCCGGGCCTACAACGTCCTGGTCGCCGTGCTGGCCGCGGTCAG CGTCAGCGTGGCGATGCGGACCGTCGGGCTGCTGCTGGTCTCCGCGCTGATGGTGGTCCCGGTCGCGACCGCCCAGCAGC TGACCCGTTCGTTCCGCGGGACCCTCCTGGCGGCGATGGCCCTCGGGACCGTCGCCGCGGTCGGCGGGCTGCTGATCTCG GCCGCCGCCCCCGACGGCACCACCGTCGCCCCCGGGCCGGCGATCGTGCTGCTCGCCCTGGGCTGCTTCACCCTCTCCTG GCCGATCGGGGTCTGGCTGCGCGCGCGGCAGCGACTGCGCCGCCCGTTCCCCGTCGTCACGACCGCGGCACACCAAGCCG TCGGGGAGGACGAGCACCCGCACGAGCACGGCGAGGACTGCGGTCACGTGGCGGTCCAGCACGGCGACCACGTCGACTAC GTCCACGACGGCCACCGGCACGCCCCGCACGGGAGGCACTATGACGAGCACTGA
Upstream 100 bases:
>100_bases ACCTCGACCCCGGGCACCACCACGACCACGCGACGGGGGCGCGCCACGACCACGCCCCGCACGTGGCATCGCCCCTCGAC CGGCACGCCGAGGAGGACCG
Downstream 100 bases:
>100_bases GCACGCGGAGACCCCGCGCCTGCGCCCGACCCGCCAGCGCCGCGCCGTCACCGAGGCGCTCGACTCGTTCAGCGACTTCC GCTCGGCCCAGGAGATCCAC
Product: ABC-3 protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSDYLDLLGLPFMQRAIIAALFTGLAAPVVGTYLVQRRLALMGDGIGHVAVTGVALGLLTGVSPVWMAVLVSVLGAILIE VIRERGHANGDVALALLFYGGLAGGVLITGLAGQSGARLQTYLFGSITTMSEADVLVTMALAGVVVLLGVGLAPQLFAVA QDQEFARVAGLNIRAYNVLVAVLAAVSVSVAMRTVGLLLVSALMVVPVATAQQLTRSFRGTLLAAMALGTVAAVGGLLIS AAAPDGTTVAPGPAIVLLALGCFTLSWPIGVWLRARQRLRRPFPVVTTAAHQAVGEDEHPHEHGEDCGHVAVQHGDHVDY VHDGHRHAPHGRHYDEH
Sequences:
>Translated_337_residues MSDYLDLLGLPFMQRAIIAALFTGLAAPVVGTYLVQRRLALMGDGIGHVAVTGVALGLLTGVSPVWMAVLVSVLGAILIE VIRERGHANGDVALALLFYGGLAGGVLITGLAGQSGARLQTYLFGSITTMSEADVLVTMALAGVVVLLGVGLAPQLFAVA QDQEFARVAGLNIRAYNVLVAVLAAVSVSVAMRTVGLLLVSALMVVPVATAQQLTRSFRGTLLAAMALGTVAAVGGLLIS AAAPDGTTVAPGPAIVLLALGCFTLSWPIGVWLRARQRLRRPFPVVTTAAHQAVGEDEHPHEHGEDCGHVAVQHGDHVDY VHDGHRHAPHGRHYDEH >Mature_336_residues SDYLDLLGLPFMQRAIIAALFTGLAAPVVGTYLVQRRLALMGDGIGHVAVTGVALGLLTGVSPVWMAVLVSVLGAILIEV IRERGHANGDVALALLFYGGLAGGVLITGLAGQSGARLQTYLFGSITTMSEADVLVTMALAGVVVLLGVGLAPQLFAVAQ DQEFARVAGLNIRAYNVLVAVLAAVSVSVAMRTVGLLLVSALMVVPVATAQQLTRSFRGTLLAAMALGTVAAVGGLLISA AAPDGTTVAPGPAIVLLALGCFTLSWPIGVWLRARQRLRRPFPVVTTAAHQAVGEDEHPHEHGEDCGHVAVQHGDHVDYV HDGHRHAPHGRHYDEH
Specific function: Part of an ATP-driven transport system TP_0034/TP_0035/TP_0036 for a metal [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=251, Percent_Identity=29.0836653386454, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 35024; Mature: 34893
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYLDLLGLPFMQRAIIAALFTGLAAPVVGTYLVQRRLALMGDGIGHVAVTGVALGLLT CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GVSPVWMAVLVSVLGAILIEVIRERGHANGDVALALLFYGGLAGGVLITGLAGQSGARLQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEH TYLFGSITTMSEADVLVTMALAGVVVLLGVGLAPQLFAVAQDQEFARVAGLNIRAYNVLV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHH AVLAAVSVSVAMRTVGLLLVSALMVVPVATAQQLTRSFRGTLLAAMALGTVAAVGGLLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAAPDGTTVAPGPAIVLLALGCFTLSWPIGVWLRARQRLRRPFPVVTTAAHQAVGEDEHP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC HEHGEDCGHVAVQHGDHVDYVHDGHRHAPHGRHYDEH CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDYLDLLGLPFMQRAIIAALFTGLAAPVVGTYLVQRRLALMGDGIGHVAVTGVALGLLT CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GVSPVWMAVLVSVLGAILIEVIRERGHANGDVALALLFYGGLAGGVLITGLAGQSGARLQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEH TYLFGSITTMSEADVLVTMALAGVVVLLGVGLAPQLFAVAQDQEFARVAGLNIRAYNVLV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHH AVLAAVSVSVAMRTVGLLLVSALMVVPVATAQQLTRSFRGTLLAAMALGTVAAVGGLLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAAPDGTTVAPGPAIVLLALGCFTLSWPIGVWLRARQRLRRPFPVVTTAAHQAVGEDEHP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC HEHGEDCGHVAVQHGDHVDYVHDGHRHAPHGRHYDEH CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]