| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716132
Identifier: 119716132
GI number: 119716132
Start: 2030262
End: 2031125
Strand: Reverse
Name: 119716132
Synonym: Noca_1900
Alternate gene names: NA
Gene position: 2031125-2030262 (Counterclockwise)
Preceding gene: 119716133
Following gene: 119716122
Centisome position: 40.74
GC content: 74.19
Gene sequence:
>864_bases GTGGCGCAGGTGACCCACGACCGCTACGGATCCGACGTCTTGGCCACCGACTGGCGCGCGCCGAAGCGGGGCCGCGCCGT CGAGGCGCCCGCCGAGCTGGGCGTCGTGGTCGAGGAGGTCACCACCGACTGGTGCGGCGAGATCGTGGCGGTCGACCGCG ACCTCGACACGCTCACCCTCGAGGATCGCCGCGGCAAGCGCCGGACCTTCCCGCTGGGGCCGGGCTTCCTGCTCGAGGGC CGGCCGGTGATCCTGGTGCCGCCGACGCGCGGTGGCACGCCGGCGAAGCCGACCCGCACCGCCTCCGGGTCGGTGGCCGT CCACGGCGCGAGGGCCCGGGTCGCCCGCGCCAGCCGGATCTTCGTCGAGGGCCGCCACGACGCCGAGCTGGTCGAGAAGG TGTGGGGCGACGACCTGCGGATCGAGGGCGTCGTGGTCGAGTACCTCGGCGGCGTCGACGACCTCGGCGACCACCTGCGC GACTTCCGGCCCGGCCCCGACCGCAAGGTCGGCGTACTCGTCGACCACCTGGTGCCCGGCTCGAAGGAGAGCCGGATCGC CCAGTCGGTCGCGGCCTCGCCGGTGGGCGGCCACGTGCTGATCGTCGGCCACCCGTTCATCGACATCTGGGCCGCGGTCA AGCCCGACCGGCTCGGCCTGACCCGCTGGCCCGACGTGCCGCGGACCATCGAGTGGAAGAAGGGCGTGTGCCAGCACCTC GGCTGGCCGCACCGCGACCAGGCCGACATCGCCCGGGCCTGGCAGCACATCCTCGGCCGCGTCTCCTCCTACAACGACCT CGACCCGGCCCTGCTGGGCCGGGTCGAGGAGCTCATCGACTTCGTCACCGCCTCCGCGGAGTGA
Upstream 100 bases:
>100_bases GCCAAGGGCGCCGAGGAGTCCGGCGGGTCGGGCGACGGGGAGGACGACTCCGCGGGCTGACGGCGCGCCCTCCGCGGCCC CGTCGGTGGTCCCGCCTAGC
Downstream 100 bases:
>100_bases GCAGGCGAAGGAACTCCGCCGTGTGACAGCGCGGCTCAGCTCATCCGCAGTGGCCGTCCCTGCGCGTCGGTGACGTTGTC GGTGGCGAGGATGATGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAQVTHDRYGSDVLATDWRAPKRGRAVEAPAELGVVVEEVTTDWCGEIVAVDRDLDTLTLEDRRGKRRTFPLGPGFLLEG RPVILVPPTRGGTPAKPTRTASGSVAVHGARARVARASRIFVEGRHDAELVEKVWGDDLRIEGVVVEYLGGVDDLGDHLR DFRPGPDRKVGVLVDHLVPGSKESRIAQSVAASPVGGHVLIVGHPFIDIWAAVKPDRLGLTRWPDVPRTIEWKKGVCQHL GWPHRDQADIARAWQHILGRVSSYNDLDPALLGRVEELIDFVTASAE
Sequences:
>Translated_287_residues MAQVTHDRYGSDVLATDWRAPKRGRAVEAPAELGVVVEEVTTDWCGEIVAVDRDLDTLTLEDRRGKRRTFPLGPGFLLEG RPVILVPPTRGGTPAKPTRTASGSVAVHGARARVARASRIFVEGRHDAELVEKVWGDDLRIEGVVVEYLGGVDDLGDHLR DFRPGPDRKVGVLVDHLVPGSKESRIAQSVAASPVGGHVLIVGHPFIDIWAAVKPDRLGLTRWPDVPRTIEWKKGVCQHL GWPHRDQADIARAWQHILGRVSSYNDLDPALLGRVEELIDFVTASAE >Mature_286_residues AQVTHDRYGSDVLATDWRAPKRGRAVEAPAELGVVVEEVTTDWCGEIVAVDRDLDTLTLEDRRGKRRTFPLGPGFLLEGR PVILVPPTRGGTPAKPTRTASGSVAVHGARARVARASRIFVEGRHDAELVEKVWGDDLRIEGVVVEYLGGVDDLGDHLRD FRPGPDRKVGVLVDHLVPGSKESRIAQSVAASPVGGHVLIVGHPFIDIWAAVKPDRLGLTRWPDVPRTIEWKKGVCQHLG WPHRDQADIARAWQHILGRVSSYNDLDPALLGRVEELIDFVTASAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31477; Mature: 31346
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVTHDRYGSDVLATDWRAPKRGRAVEAPAELGVVVEEVTTDWCGEIVAVDRDLDTLTL CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEE EDRRGKRRTFPLGPGFLLEGRPVILVPPTRGGTPAKPTRTASGSVAVHGARARVARASRI CCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHEE FVEGRHDAELVEKVWGDDLRIEGVVVEYLGGVDDLGDHLRDFRPGPDRKVGVLVDHLVPG EEECCCHHHHHHHHCCCCEEEEEEHEEHHCCHHHHHHHHHHCCCCCCCCHHEEEECCCCC SKESRIAQSVAASPVGGHVLIVGHPFIDIWAAVKPDRLGLTRWPDVPRTIEWKKGVCQHL CHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC GWPHRDQADIARAWQHILGRVSSYNDLDPALLGRVEELIDFVTASAE CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AQVTHDRYGSDVLATDWRAPKRGRAVEAPAELGVVVEEVTTDWCGEIVAVDRDLDTLTL CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEE EDRRGKRRTFPLGPGFLLEGRPVILVPPTRGGTPAKPTRTASGSVAVHGARARVARASRI CCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHEE FVEGRHDAELVEKVWGDDLRIEGVVVEYLGGVDDLGDHLRDFRPGPDRKVGVLVDHLVPG EEECCCHHHHHHHHCCCCEEEEEEHEEHHCCHHHHHHHHHHCCCCCCCCHHEEEECCCCC SKESRIAQSVAASPVGGHVLIVGHPFIDIWAAVKPDRLGLTRWPDVPRTIEWKKGVCQHL CHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC GWPHRDQADIARAWQHILGRVSSYNDLDPALLGRVEELIDFVTASAE CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA