| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is gph [C]
Identifier: 119716112
GI number: 119716112
Start: 2002630
End: 2003322
Strand: Direct
Name: gph [C]
Synonym: Noca_1880
Alternate gene names: 119716112
Gene position: 2002630-2003322 (Clockwise)
Preceding gene: 119716111
Following gene: 119716115
Centisome position: 40.17
GC content: 72.44
Gene sequence:
>693_bases GTGACCGGGCACCGACGGCGCATGGCCTCCTTCGACACCGTCGTCCTCGACATCGACGGCACGCTGCTCGACTCCAACTA CCACCACGCCCTGGCCTGGTCGCGCGCCTTCGACAAGGTCCTGGACCGGCACGTCCCGGCCGCTGTGATCCACCGCCACA TCGGGATGGGCGGGGACCGGCTGGTCGCCGCCGTCGCCGGCGACGACGTCGAGGACCAGCACGGCGACGAGGTGCGCGAG CGCTGGGAGAAGGAGTACGACGAGGTCATCGACCAGACCCGGCTCTTCGAGTCGGCCCGCGAGCTGCTCGTCGCGATCGG TGCGGCCGGCCTGAAGGTGGTGCTGGCCAGCTCCAGCATCCCCAAGCACGCCGAGCGCCCCCTGGAGCTGCTGCGAGCCG GCGAGCACTCCGACGCCTGGACCACCAGCGAGGACGCCGAGGAGTCCAAGCCCGACCCGGAGCTGCTCGACGCGGCGCTG GAGAAGGTCGCCGGAGGCCGCGCGCTGATGGTCGGCGACGCCGTCTGGGACGTCGAGGCCGCCGACGCCCAGAGGATCCC GACGATCGGACTGCTCTGTGGCGGCACCGGACGCCAGGAGCTGCTCGACGCGGGCGCGGTCGCCGTGTACGACGACCCGG CCGACCTGATCGCGCACCTCGGCGAGGCGCTCGAGGCCGCCAACAGGAGCTGA
Upstream 100 bases:
>100_bases CCGGGTCGACGTCGTCGAGCGCTCGCCGTCGGGCAAGGCCGACTACCGCTGGGCCCGACCTCCGCGACCTCCGTGGGCGC CGCCCGAGCATGAAGGTCGG
Downstream 100 bases:
>100_bases TGGTTGGTGACCGCTGGTGCCGGCGGGCCCCCGTCCCGCCGGCACCGGTCATGGGGTCGGTCGCCTAGTCGCTCACCGCG ATCGTCCAGTAGCTGTCGAC
Product: HAD family hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Phosphoglycolate Phosphatase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Hydrolase Subfamily Ia; Phosphatase/ Hydrolase; Haloacid Dehalogenase-Like Family Hydrolase; Phosphoglycolate Phosphatase (PGPase; HAD-Superfamily Hydrolase Subfamily IA; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; CbbY/CbbZ/GpH/YieH Family Hydrolase; Pyrophosphatase PpaX; Haloacid Dehalogenase-Like Hydrolase Family Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTGHRRRMASFDTVVLDIDGTLLDSNYHHALAWSRAFDKVLDRHVPAAVIHRHIGMGGDRLVAAVAGDDVEDQHGDEVRE RWEKEYDEVIDQTRLFESARELLVAIGAAGLKVVLASSSIPKHAERPLELLRAGEHSDAWTTSEDAEESKPDPELLDAAL EKVAGGRALMVGDAVWDVEAADAQRIPTIGLLCGGTGRQELLDAGAVAVYDDPADLIAHLGEALEAANRS
Sequences:
>Translated_230_residues MTGHRRRMASFDTVVLDIDGTLLDSNYHHALAWSRAFDKVLDRHVPAAVIHRHIGMGGDRLVAAVAGDDVEDQHGDEVRE RWEKEYDEVIDQTRLFESARELLVAIGAAGLKVVLASSSIPKHAERPLELLRAGEHSDAWTTSEDAEESKPDPELLDAAL EKVAGGRALMVGDAVWDVEAADAQRIPTIGLLCGGTGRQELLDAGAVAVYDDPADLIAHLGEALEAANRS >Mature_229_residues TGHRRRMASFDTVVLDIDGTLLDSNYHHALAWSRAFDKVLDRHVPAAVIHRHIGMGGDRLVAAVAGDDVEDQHGDEVRER WEKEYDEVIDQTRLFESARELLVAIGAAGLKVVLASSSIPKHAERPLELLRAGEHSDAWTTSEDAEESKPDPELLDAALE KVAGGRALMVGDAVWDVEAADAQRIPTIGLLCGGTGRQELLDAGAVAVYDDPADLIAHLGEALEAANRS
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 24881; Mature: 24750
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGHRRRMASFDTVVLDIDGTLLDSNYHHALAWSRAFDKVLDRHVPAAVIHRHIGMGGDR CCCCHHHHHHHCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH LVAAVAGDDVEDQHGDEVRERWEKEYDEVIDQTRLFESARELLVAIGAAGLKVVLASSSI EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC PKHAERPLELLRAGEHSDAWTTSEDAEESKPDPELLDAALEKVAGGRALMVGDAVWDVEA CHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCEEEECCHHHCCCC ADAQRIPTIGLLCGGTGRQELLDAGAVAVYDDPADLIAHLGEALEAANRS CCCCCCCEEEEEECCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGHRRRMASFDTVVLDIDGTLLDSNYHHALAWSRAFDKVLDRHVPAAVIHRHIGMGGDR CCCHHHHHHHCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH LVAAVAGDDVEDQHGDEVRERWEKEYDEVIDQTRLFESARELLVAIGAAGLKVVLASSSI EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC PKHAERPLELLRAGEHSDAWTTSEDAEESKPDPELLDAALEKVAGGRALMVGDAVWDVEA CHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCEEEECCHHHCCCC ADAQRIPTIGLLCGGTGRQELLDAGAVAVYDDPADLIAHLGEALEAANRS CCCCCCCEEEEEECCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA