| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716109
Identifier: 119716109
GI number: 119716109
Start: 2000508
End: 2000960
Strand: Reverse
Name: 119716109
Synonym: Noca_1877
Alternate gene names: NA
Gene position: 2000960-2000508 (Counterclockwise)
Preceding gene: 119716110
Following gene: 119716108
Centisome position: 40.13
GC content: 71.52
Gene sequence:
>453_bases GTGAGATCGACCGCGCGTGTGCTCGCGGCCCTGGGCACCGCGCTGGTGGTGCTCCTGGGCGGCGGCTGCGCACCCCAGTC GCCCGACCACAACTCGTGGACCGACCAGGCCCGCCAGGCCCTGGAGGACACGGCCAGCCAGGTAGCCACCGTCGCCCTGC TGCTCCGCCTGGAGCGCGAGAACAAGGTGCCGGGCAAGTACCAGCAGGTCGTCGCACAGGACAGCGAGTCCGCGGTGGGC GCGACGATGGCCAAGTTCGGCGGGGAGCAGCCCGAGCCGCGCGACGACGCGACGTACAAGCGGGTCACCAGCCTGATGTC CGACGCCTCCGACCTGGTCAGCGAGGTGCGGATCGCCATCGTGCGCCGTGACAGCGACGAGTACCCGAAGCTGCTCGACC AGCTCGAGGAGCTGGACCGCAAGCTCACCCAGGCCGCGGACGGCCTGCGGTGA
Upstream 100 bases:
>100_bases GGGCCATCCCCGAGGGTCGGCGCACCCGCGGGCTGCTGCGCAGCCTCGTGCGTCGATCGGCGACCGATTGACGCTCCGAC CCTCTGGGTACGGAGCCGGC
Downstream 100 bases:
>100_bases AGAAGTACTTCGCCGTCGCGCTCGGCATCCTCACCGCGATCGGCGGCTTCGTCGACATCGGCGACCTCGTCACGAACGCA CAGGTCGGCGCGCGCTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRSTARVLAALGTALVVLLGGGCAPQSPDHNSWTDQARQALEDTASQVATVALLLRLERENKVPGKYQQVVAQDSESAVG ATMAKFGGEQPEPRDDATYKRVTSLMSDASDLVSEVRIAIVRRDSDEYPKLLDQLEELDRKLTQAADGLR
Sequences:
>Translated_150_residues MRSTARVLAALGTALVVLLGGGCAPQSPDHNSWTDQARQALEDTASQVATVALLLRLERENKVPGKYQQVVAQDSESAVG ATMAKFGGEQPEPRDDATYKRVTSLMSDASDLVSEVRIAIVRRDSDEYPKLLDQLEELDRKLTQAADGLR >Mature_150_residues MRSTARVLAALGTALVVLLGGGCAPQSPDHNSWTDQARQALEDTASQVATVALLLRLERENKVPGKYQQVVAQDSESAVG ATMAKFGGEQPEPRDDATYKRVTSLMSDASDLVSEVRIAIVRRDSDEYPKLLDQLEELDRKLTQAADGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16281; Mature: 16281
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTARVLAALGTALVVLLGGGCAPQSPDHNSWTDQARQALEDTASQVATVALLLRLERE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKVPGKYQQVVAQDSESAVGATMAKFGGEQPEPRDDATYKRVTSLMSDASDLVSEVRIAI CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRRDSDEYPKLLDQLEELDRKLTQAADGLR HHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSTARVLAALGTALVVLLGGGCAPQSPDHNSWTDQARQALEDTASQVATVALLLRLERE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKVPGKYQQVVAQDSESAVGATMAKFGGEQPEPRDDATYKRVTSLMSDASDLVSEVRIAI CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRRDSDEYPKLLDQLEELDRKLTQAADGLR HHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA