| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cyp108 [H]
Identifier: 119716103
GI number: 119716103
Start: 1994792
End: 1995931
Strand: Direct
Name: cyp108 [H]
Synonym: Noca_1871
Alternate gene names: 119716103
Gene position: 1994792-1995931 (Clockwise)
Preceding gene: 119716102
Following gene: 119716105
Centisome position: 40.01
GC content: 73.6
Gene sequence:
>1140_bases GTGGGCGAGCCGGTCGAGATCGACACCGGACAGGCGGACCAGCGCGCCGTCTACGACGCGCTGCGAGCCCGCTGCCCGGT GGCCCACGAGGACGGGGCCTGGGTGGTGCTGCGGCACGCGGAGGTGGTCGCTGCGGCCACGGACCCGGCGCGCTTCTCCA GTGACGTCACCGGCCGACGGGCGATCCCCAACAGCCTGGACGGCGCCGAGCACGCGGCGTACCGCGCCGTCGTCGACCGC TACCTCACGTCCGAGCGCGTGGCCCGGCAGGAGCCCGGCTGCCGCAGGCATGCAGTCGCCATCGTCGACGCGCTGCCGCG CGACGTCACCGTGAAGACCATTGGCGGGATCGGCGTGCCGTACGCCGTGCGCTCCCAGTCCTCCTGGCTGGGCTGGCCGG CCGAGCTGGAGGCAGAGCTGGTCGCCTGGTTGCAGGACAACCACGCCGCCACCCGGTCCGGGGACCGCGCCCGGACCATG GAGGTGGCCGAGCGCTTCGACCACCTCATCCGCACCCTGCTCGACGAGCGGCGGGACGGTCCGGTGGTCGACGTCACCGG CGAGCTGCTGCGGGAGACCGTGGACGGTCGGCCGCTGACCGACGAGGAGGTCGTCTCGATCCTGCGCAACTGGACGGCCG GAGACCTCGGCTCGCTGGCCACCTCGGTCGGTGTGATCGTGCACTTCCTCGCGGCCAATCCGGCCCCGCAACGCGACGTC CGCGCACTCGTCGAGGCTGGGGACCGCGCCGGCGTGGAGGCGGCGGTCGAGGAGATCTTGCGCATCGACGACCCGTTCAT CGCCAACCGTCGGCGAGCGACCAGGACGGTCGAGCTCGGCGGCGAGACGATCCCCGAGGACGACCGGCTGCTGCTCAACT GGACCGCCGCCAACCGCGACCCGCTGGTCTTCGGAGACCCCGACGAGTACGACCCGGTCGGGCACGCCGCAGCCAACCTG GTCTTCGGCATCGGCCCGCACGTCTGCCCGGGTCGCGAGCTCACGCTGATGGAGCTGCGGGTGGTCGTCGAGGAACTGCT GGCGCGCACCACCTGGCTCGAGCCCGCGCTCGACCGGCCGGCCGTGCGCGAGACGCCTCCGGTCGGCGGCTGGGCCCGGG TGCCCGTGGTCCTGCGCTGA
Upstream 100 bases:
>100_bases CGCAAGGTGCTCGCCCGCCTGACGACCTCCGCCCCGGCTGCGAGCTGAGCGTCCCGACCCCGCGGGTAGCGTGGGACGCC GGTCGACGGAAGGAACGGGT
Downstream 100 bases:
>100_bases TTCCCGCCCGGGGACGGTGCGGGTCAGGCGCGGGTGCGGTCCGTCCCGGCGACCGACTCCGCTGCACCGATCAGCAGCAC CGCAGCGATCACCGCGAGCA
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGEPVEIDTGQADQRAVYDALRARCPVAHEDGAWVVLRHAEVVAAATDPARFSSDVTGRRAIPNSLDGAEHAAYRAVVDR YLTSERVARQEPGCRRHAVAIVDALPRDVTVKTIGGIGVPYAVRSQSSWLGWPAELEAELVAWLQDNHAATRSGDRARTM EVAERFDHLIRTLLDERRDGPVVDVTGELLRETVDGRPLTDEEVVSILRNWTAGDLGSLATSVGVIVHFLAANPAPQRDV RALVEAGDRAGVEAAVEEILRIDDPFIANRRRATRTVELGGETIPEDDRLLLNWTAANRDPLVFGDPDEYDPVGHAAANL VFGIGPHVCPGRELTLMELRVVVEELLARTTWLEPALDRPAVRETPPVGGWARVPVVLR
Sequences:
>Translated_379_residues MGEPVEIDTGQADQRAVYDALRARCPVAHEDGAWVVLRHAEVVAAATDPARFSSDVTGRRAIPNSLDGAEHAAYRAVVDR YLTSERVARQEPGCRRHAVAIVDALPRDVTVKTIGGIGVPYAVRSQSSWLGWPAELEAELVAWLQDNHAATRSGDRARTM EVAERFDHLIRTLLDERRDGPVVDVTGELLRETVDGRPLTDEEVVSILRNWTAGDLGSLATSVGVIVHFLAANPAPQRDV RALVEAGDRAGVEAAVEEILRIDDPFIANRRRATRTVELGGETIPEDDRLLLNWTAANRDPLVFGDPDEYDPVGHAAANL VFGIGPHVCPGRELTLMELRVVVEELLARTTWLEPALDRPAVRETPPVGGWARVPVVLR >Mature_378_residues GEPVEIDTGQADQRAVYDALRARCPVAHEDGAWVVLRHAEVVAAATDPARFSSDVTGRRAIPNSLDGAEHAAYRAVVDRY LTSERVARQEPGCRRHAVAIVDALPRDVTVKTIGGIGVPYAVRSQSSWLGWPAELEAELVAWLQDNHAATRSGDRARTME VAERFDHLIRTLLDERRDGPVVDVTGELLRETVDGRPLTDEEVVSILRNWTAGDLGSLATSVGVIVHFLAANPAPQRDVR ALVEAGDRAGVEAAVEEILRIDDPFIANRRRATRTVELGGETIPEDDRLLLNWTAANRDPLVFGDPDEYDPVGHAAANLV FGIGPHVCPGRELTLMELRVVVEELLARTTWLEPALDRPAVRETPPVGGWARVPVVLR
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 41455; Mature: 41324
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPVEIDTGQADQRAVYDALRARCPVAHEDGAWVVLRHAEVVAAATDPARFSSDVTGRR CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCCHHHCCCCCCCC AIPNSLDGAEHAAYRAVVDRYLTSERVARQEPGCRRHAVAIVDALPRDVTVKTIGGIGVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC YAVRSQSSWLGWPAELEAELVAWLQDNHAATRSGDRARTMEVAERFDHLIRTLLDERRDG CEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PVVDVTGELLRETVDGRPLTDEEVVSILRNWTAGDLGSLATSVGVIVHFLAANPAPQRDV CEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH RALVEAGDRAGVEAAVEEILRIDDPFIANRRRATRTVELGGETIPEDDRLLLNWTAANRD HHHHHCCCCCCHHHHHHHHHHCCCCHHHCCHHHCEEEECCCCCCCCCCCEEEEEECCCCC PLVFGDPDEYDPVGHAAANLVFGIGPHVCPGRELTLMELRVVVEELLARTTWLEPALDRP CEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC AVRETPPVGGWARVPVVLR CCCCCCCCCCCCCCCEEEC >Mature Secondary Structure GEPVEIDTGQADQRAVYDALRARCPVAHEDGAWVVLRHAEVVAAATDPARFSSDVTGRR CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEECCCCHHHCCCCCCCC AIPNSLDGAEHAAYRAVVDRYLTSERVARQEPGCRRHAVAIVDALPRDVTVKTIGGIGVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC YAVRSQSSWLGWPAELEAELVAWLQDNHAATRSGDRARTMEVAERFDHLIRTLLDERRDG CEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PVVDVTGELLRETVDGRPLTDEEVVSILRNWTAGDLGSLATSVGVIVHFLAANPAPQRDV CEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH RALVEAGDRAGVEAAVEEILRIDDPFIANRRRATRTVELGGETIPEDDRLLLNWTAANRD HHHHHCCCCCCHHHHHHHHHHCCCCHHHCCHHHCEEEECCCCCCCCCCCEEEEEECCCCC PLVFGDPDEYDPVGHAAANLVFGIGPHVCPGRELTLMELRVVVEELLARTTWLEPALDRP CEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC AVRETPPVGGWARVPVVLR CCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]