| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716070
Identifier: 119716070
GI number: 119716070
Start: 1961071
End: 1962216
Strand: Direct
Name: 119716070
Synonym: Noca_1837
Alternate gene names: NA
Gene position: 1961071-1962216 (Clockwise)
Preceding gene: 119716069
Following gene: 119716071
Centisome position: 39.33
GC content: 71.64
Gene sequence:
>1146_bases ATGTCGCACTACGACGTGATCGTGATCGGCGGCGGGATCGCCGGCGTCTCGATCGGGTTCGAGCTGTCGAGGACCGCCAC GGTCTGCCTTCTGGAGATGGAGTCGACGCTCGCGTTCCACACCACGGGGCGCTCGGCCGCCACGTTCCTGGAGACCTACG GCGGCCCGGAGATCCGGGCGCTGACGACTGGGAGCCGCGAGTTCCTCGAGAACCCGCCGGAGTTCTTCGAGTCGGAGCTG ATGACGCCGCGCCCGCTCCTGCAGTTCGCCAAGCAGGGACGCGGTGCCGTCATCGAGCAGCTGCACGCCGACGTGCTGCC GCTGGTCCCGGACGCGGAGCTGCTCGGCCCCGACGAGGTCGCCGCGCTGTTCCCCGTGGTCCGACCCGGGTACGTGGAGC GGGGCATGTACGAGCCGGGTGCCATGGAGATGGACGTCGCCGGCCTGCACCAGGGCTACGTCCGGGGCCTGAAGGCCAAC AAGGGCGAGATCGTCAAGAGTGCCCCGGTCGTCGGGCTGACCCGCGGTCCGGAGAGTTGGACGGTCGACACCGCCGACGG CGAGCGGCGTTCGGCCGCGGCGATCGTCGATGCCGCGGGCGCCTGGGGCGACGTCGTCGCCGAGATGGCGGGCGCGAAGC CGGTGGGCCTGACGCCGTTGCGGCGGACCATCTTCATGGTCAACTCACCGCAGGGCGCGCAGACCAAGGACCTGCCGATC TTCGGTGACATCGACCAGTCGTTCTACGTCAAGCCCGAGGGGGCGCAGTTCCTCTGCTCGCCCGCCGACGAGACGCCGTG CCCCCCGATGGACGCGAAGGCCGACGAGCTCGAGATCGCCCGGGCGATCGACGAGATCAACGCCGCCACGACCCTGAACG CGCGCAGCGTGACCACCTCGTGGGCCGGCCTGCGCAGCTTCGTGCCCGACCGCAACTTCGTGGTCGGACCCGACTCCGAC GTGCCCGGCTTCCACTGGTTCCTCGGCCAGGGCGGCTACGGCATCCAGACGGCTCCGGCCGCGGCGCGGGTCGGCGCGGC CCTCGTGCGGGGCGAGGAGCTGCCCGCCGACCTGGTCGAGCGGGGGCTCGACGCCGCCAAGCTCGCCCCGCACCGCCCCG GCATGTCGGTCTCGGCAGGACACTGA
Upstream 100 bases:
>100_bases AATCGCAACTAAGCGCTTGCTTGCCAGACCGTACTATCCGTGCCATAGTCACGCCCACTGTGACCGCAGTCACGTGATAC GAGAGGTGGTCGAGCAAGAG
Downstream 100 bases:
>100_bases GGAACGCCCGTGGACTTCCTGCAACAGGTCATCAACGGCCTGACCATCGGCAGCGTCTACGCCCTGGTCGCAATCGGCTT CTCCGTCGTGTACGGCGCCC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain-Containing Protein; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSHYDVIVIGGGIAGVSIGFELSRTATVCLLEMESTLAFHTTGRSAATFLETYGGPEIRALTTGSREFLENPPEFFESEL MTPRPLLQFAKQGRGAVIEQLHADVLPLVPDAELLGPDEVAALFPVVRPGYVERGMYEPGAMEMDVAGLHQGYVRGLKAN KGEIVKSAPVVGLTRGPESWTVDTADGERRSAAAIVDAAGAWGDVVAEMAGAKPVGLTPLRRTIFMVNSPQGAQTKDLPI FGDIDQSFYVKPEGAQFLCSPADETPCPPMDAKADELEIARAIDEINAATTLNARSVTTSWAGLRSFVPDRNFVVGPDSD VPGFHWFLGQGGYGIQTAPAAARVGAALVRGEELPADLVERGLDAAKLAPHRPGMSVSAGH
Sequences:
>Translated_381_residues MSHYDVIVIGGGIAGVSIGFELSRTATVCLLEMESTLAFHTTGRSAATFLETYGGPEIRALTTGSREFLENPPEFFESEL MTPRPLLQFAKQGRGAVIEQLHADVLPLVPDAELLGPDEVAALFPVVRPGYVERGMYEPGAMEMDVAGLHQGYVRGLKAN KGEIVKSAPVVGLTRGPESWTVDTADGERRSAAAIVDAAGAWGDVVAEMAGAKPVGLTPLRRTIFMVNSPQGAQTKDLPI FGDIDQSFYVKPEGAQFLCSPADETPCPPMDAKADELEIARAIDEINAATTLNARSVTTSWAGLRSFVPDRNFVVGPDSD VPGFHWFLGQGGYGIQTAPAAARVGAALVRGEELPADLVERGLDAAKLAPHRPGMSVSAGH >Mature_380_residues SHYDVIVIGGGIAGVSIGFELSRTATVCLLEMESTLAFHTTGRSAATFLETYGGPEIRALTTGSREFLENPPEFFESELM TPRPLLQFAKQGRGAVIEQLHADVLPLVPDAELLGPDEVAALFPVVRPGYVERGMYEPGAMEMDVAGLHQGYVRGLKANK GEIVKSAPVVGLTRGPESWTVDTADGERRSAAAIVDAAGAWGDVVAEMAGAKPVGLTPLRRTIFMVNSPQGAQTKDLPIF GDIDQSFYVKPEGAQFLCSPADETPCPPMDAKADELEIARAIDEINAATTLNARSVTTSWAGLRSFVPDRNFVVGPDSDV PGFHWFLGQGGYGIQTAPAAARVGAALVRGEELPADLVERGLDAAKLAPHRPGMSVSAGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24797151, Length=403, Percent_Identity=25.0620347394541, Blast_Score=79, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40366; Mature: 40235
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYDVIVIGGGIAGVSIGFELSRTATVCLLEMESTLAFHTTGRSAATFLETYGGPEIRA CCCEEEEEECCCEEEEEECEEECCCEEEEEEEECCEEEEEECCCHHHHHHHHCCCCEEEE LTTGSREFLENPPEFFESELMTPRPLLQFAKQGRGAVIEQLHADVLPLVPDAELLGPDEV EECCCHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCHHHH AALFPVVRPGYVERGMYEPGAMEMDVAGLHQGYVRGLKANKGEIVKSAPVVGLTRGPESW HHHHHHCCCCHHHCCCCCCCCCEECHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCC TVDTADGERRSAAAIVDAAGAWGDVVAEMAGAKPVGLTPLRRTIFMVNSPQGAQTKDLPI EEECCCCCCHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCE FGDIDQSFYVKPEGAQFLCSPADETPCPPMDAKADELEIARAIDEINAATTLNARSVTTS EECCCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHH WAGLRSFVPDRNFVVGPDSDVPGFHWFLGQGGYGIQTAPAAARVGAALVRGEELPADLVE HHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH RGLDAAKLAPHRPGMSVSAGH CCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure SHYDVIVIGGGIAGVSIGFELSRTATVCLLEMESTLAFHTTGRSAATFLETYGGPEIRA CCEEEEEECCCEEEEEECEEECCCEEEEEEEECCEEEEEECCCHHHHHHHHCCCCEEEE LTTGSREFLENPPEFFESELMTPRPLLQFAKQGRGAVIEQLHADVLPLVPDAELLGPDEV EECCCHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCHHHH AALFPVVRPGYVERGMYEPGAMEMDVAGLHQGYVRGLKANKGEIVKSAPVVGLTRGPESW HHHHHHCCCCHHHCCCCCCCCCEECHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCC TVDTADGERRSAAAIVDAAGAWGDVVAEMAGAKPVGLTPLRRTIFMVNSPQGAQTKDLPI EEECCCCCCHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCE FGDIDQSFYVKPEGAQFLCSPADETPCPPMDAKADELEIARAIDEINAATTLNARSVTTS EECCCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHH WAGLRSFVPDRNFVVGPDSDVPGFHWFLGQGGYGIQTAPAAARVGAALVRGEELPADLVE HHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH RGLDAAKLAPHRPGMSVSAGH CCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA