| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716021
Identifier: 119716021
GI number: 119716021
Start: 1898815
End: 1899582
Strand: Direct
Name: 119716021
Synonym: Noca_1787
Alternate gene names: NA
Gene position: 1898815-1899582 (Clockwise)
Preceding gene: 119716020
Following gene: 119716023
Centisome position: 38.08
GC content: 72.27
Gene sequence:
>768_bases ATGGATGGCCTGGTGATCCTCCTCCTGCTCGCCGCGATCGTGGCGGCGGTGGTGCTCGCGCGGCGCAGCAGCAAGGCGCG TGAGCGCGAACGCCAGCGCGCCGAGCTCGAGCCCGTGAAGAAGCTCGCCTTCGAGGACATCACCGCCCTCGGGGAAGAGC TCCAGGCACTCGACCTCGATCTCGCGGGGCACGAGCTCGGGGCGGGGGAGAACGCCGACTACCAACGCGCCCTCGACGCC TACGAGTCGGCGAAGACCGCCGGTGACGCGATGTCGCGTCCCGACGACGTCCGGCATGTCACGCAGATCCTCGAAGACGG GCGCTACGCGATCGCGTGCGTCCGCGCGCGGGTGGCGGGCGATCCGCTGCCGACCCGCCGCCCGCCGTGCTTCTTCGACC CTCGGCACGGCCTGTCCGTGACCGAGGTGCCGTGGACCCCGCCCGGTGGCGCGACCCGCGACGTCCCCGCCTGTGCCCTC GATGCCGAGCGGGTCGCAGCCGGCGCCGATCCCGACGCCCGGATGGTGATGGTCGGCGCCCAGCGGGTGCCCTACTGGCA GGGCGGGCGCGCCTACCAGCCCTACGCCTCGGGCTACTTCGGCGCCTTCACGCCGATGGACTGGATGTTCGCCGGGCTGC TGTTCGGTGGTTTCGGCGGCTTCGACGCGCTCGGTGAGGGGATCGGCGCCCTCGGCGAGGGCATCGGTGACGGGATCGGC AGCATCGGCGACGGCATCGGCGACCTGTTCGACGGGTTCGACTTCTAG
Upstream 100 bases:
>100_bases CCGACGGGCTGGTCTACCGGACCGCGGAGGGCGCGCTGGCGGCGGCCGGCTGACGCCGGCGACCCGTTCCGGGGTTGCCG GCGCTCCGTAGGCTGGGTCC
Downstream 100 bases:
>100_bases TGTCGCGTCTCGGAAGTTGTTGAACGGTTGGCGTTCTCAGGGTGTGTGCATCGCAAGGCGCCGGCGCGCCGCCATACCCG CTCGTCTCGCAAGCGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLDLAGHELGAGENADYQRALDA YESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAGDPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACAL DAERVAAGADPDARMVMVGAQRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG SIGDGIGDLFDGFDF
Sequences:
>Translated_255_residues MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLDLAGHELGAGENADYQRALDA YESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAGDPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACAL DAERVAAGADPDARMVMVGAQRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG SIGDGIGDLFDGFDF >Mature_255_residues MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLDLAGHELGAGENADYQRALDA YESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAGDPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACAL DAERVAAGADPDARMVMVGAQRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG SIGDGIGDLFDGFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27103; Mature: 27103
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGHELGAGENADYQRALDAYESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAG HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC DPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACALDAERVAAGADPDARMVMVGA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECC QRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SIGDGIGDLFDGFDF HHHHHHHHHHCCCCC >Mature Secondary Structure MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGHELGAGENADYQRALDAYESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAG HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC DPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACALDAERVAAGADPDARMVMVGA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECC QRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SIGDGIGDLFDGFDF HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA