Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716021

Identifier: 119716021

GI number: 119716021

Start: 1898815

End: 1899582

Strand: Direct

Name: 119716021

Synonym: Noca_1787

Alternate gene names: NA

Gene position: 1898815-1899582 (Clockwise)

Preceding gene: 119716020

Following gene: 119716023

Centisome position: 38.08

GC content: 72.27

Gene sequence:

>768_bases
ATGGATGGCCTGGTGATCCTCCTCCTGCTCGCCGCGATCGTGGCGGCGGTGGTGCTCGCGCGGCGCAGCAGCAAGGCGCG
TGAGCGCGAACGCCAGCGCGCCGAGCTCGAGCCCGTGAAGAAGCTCGCCTTCGAGGACATCACCGCCCTCGGGGAAGAGC
TCCAGGCACTCGACCTCGATCTCGCGGGGCACGAGCTCGGGGCGGGGGAGAACGCCGACTACCAACGCGCCCTCGACGCC
TACGAGTCGGCGAAGACCGCCGGTGACGCGATGTCGCGTCCCGACGACGTCCGGCATGTCACGCAGATCCTCGAAGACGG
GCGCTACGCGATCGCGTGCGTCCGCGCGCGGGTGGCGGGCGATCCGCTGCCGACCCGCCGCCCGCCGTGCTTCTTCGACC
CTCGGCACGGCCTGTCCGTGACCGAGGTGCCGTGGACCCCGCCCGGTGGCGCGACCCGCGACGTCCCCGCCTGTGCCCTC
GATGCCGAGCGGGTCGCAGCCGGCGCCGATCCCGACGCCCGGATGGTGATGGTCGGCGCCCAGCGGGTGCCCTACTGGCA
GGGCGGGCGCGCCTACCAGCCCTACGCCTCGGGCTACTTCGGCGCCTTCACGCCGATGGACTGGATGTTCGCCGGGCTGC
TGTTCGGTGGTTTCGGCGGCTTCGACGCGCTCGGTGAGGGGATCGGCGCCCTCGGCGAGGGCATCGGTGACGGGATCGGC
AGCATCGGCGACGGCATCGGCGACCTGTTCGACGGGTTCGACTTCTAG

Upstream 100 bases:

>100_bases
CCGACGGGCTGGTCTACCGGACCGCGGAGGGCGCGCTGGCGGCGGCCGGCTGACGCCGGCGACCCGTTCCGGGGTTGCCG
GCGCTCCGTAGGCTGGGTCC

Downstream 100 bases:

>100_bases
TGTCGCGTCTCGGAAGTTGTTGAACGGTTGGCGTTCTCAGGGTGTGTGCATCGCAAGGCGCCGGCGCGCCGCCATACCCG
CTCGTCTCGCAAGCGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLDLAGHELGAGENADYQRALDA
YESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAGDPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACAL
DAERVAAGADPDARMVMVGAQRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG
SIGDGIGDLFDGFDF

Sequences:

>Translated_255_residues
MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLDLAGHELGAGENADYQRALDA
YESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAGDPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACAL
DAERVAAGADPDARMVMVGAQRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG
SIGDGIGDLFDGFDF
>Mature_255_residues
MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLDLAGHELGAGENADYQRALDA
YESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAGDPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACAL
DAERVAAGADPDARMVMVGAQRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG
SIGDGIGDLFDGFDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27103; Mature: 27103

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGHELGAGENADYQRALDAYESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAG
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
DPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACALDAERVAAGADPDARMVMVGA
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECC
QRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SIGDGIGDLFDGFDF
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MDGLVILLLLAAIVAAVVLARRSSKARERERQRAELEPVKKLAFEDITALGEELQALDLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGHELGAGENADYQRALDAYESAKTAGDAMSRPDDVRHVTQILEDGRYAIACVRARVAG
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
DPLPTRRPPCFFDPRHGLSVTEVPWTPPGGATRDVPACALDAERVAAGADPDARMVMVGA
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECC
QRVPYWQGGRAYQPYASGYFGAFTPMDWMFAGLLFGGFGGFDALGEGIGALGEGIGDGIG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SIGDGIGDLFDGFDF
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA