| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715975
Identifier: 119715975
GI number: 119715975
Start: 1847292
End: 1848740
Strand: Reverse
Name: 119715975
Synonym: Noca_1740
Alternate gene names: NA
Gene position: 1848740-1847292 (Counterclockwise)
Preceding gene: 119715976
Following gene: 119715972
Centisome position: 37.08
GC content: 68.46
Gene sequence:
>1449_bases ATGGGATCAGACAAGCCGCGGCCGACGGGGAGGGACGCAGCGGCTCCGGCAACGAAAGCAGGACACGCAGTGAACATGTC CCTCAAGAGGGCGATCACCACCCTCACGGTCTGCGCAGCCGGCCTCGCCGGCGCCCTCGTGACCACCACGCCCGCCGACG CGCACAAGGCCTCGGACGGGGATCGCCTCGTGAAGACGAACCTCGGCTACAAGGGCACGGCGTACGGCACCAAGGTGATC ATCGACGGCGTCGAGATCCGCAACGCCAAGGAGGCGTTCGCACAGCAGCGCTGCACCCGCTACGCGGGCCGCACCGTGCT CAAGAACTCGACGCTCTCCCTTCCCGACAACGAGCTGGTCAAGGTGTCGGCGGCGACCAGCCACACCGAGACCTACGCGA AGGACGGCCTGAACGGCGTCCGCGGCACCAGCACGATCGCCGACCTCGCCCTGGGCGGCGAGTTCCAGGGGACCCAGACC CCGACCCTGTCTCTCAAGGGCCTCACGTCGGTCGCCGACGCCTTCCGCAAGGCGGACGGCACGTTCGGCCACCAGGAGTC CTTCAGCTTCGAGGGTCTGAGGATCGAGAACCTGCCTGAGCAGATCCCCCAGGAGCTGCAGGACCTGCTGGACATCCTCG GGTCCACCAGCAGCGACCTCGTCACCCAGGTGCTCGAACTGCTCACCTCCGTCACCGGGAACACCATCGAGATCCCGGGT CTCGGCAGCATCGGCCTGGCCGGGGTGAAGTCCGGCTCCGCCGGGCCGCACTCCGCGGCGTCGCAGACCTACGCGCTGCG GCTCCTGGTCAACGCGACCGGGCACGACACCGTCATCACCCTCGGCCGGGCGCGCACGGCGATCTCCGAGCCGGTGCCGG CGGGCGTCTTCCACTCGCGGGCGATGGGCCTGGAGATGTTCGGCGGCAACGATCTGCTCCGCCTCGGCGGCCTGCAGGAG CAGTCGCTCAACTGCTCGGGCAGCAACGGCAAGGTGAAGACCCACAAGATCGCCGACGCCCGGGTGCTCGGCGGCCTGGT GAACCTGACCGGCATCGAGTACCGGCTGATGGGTGACCAGTTCCGCAACGGCTCGGCCAACGGCTTCGTCGCCAGCAAGA TCGGCTCGCTCGACATCCCCAGCCTCGGCCTGGTCATCGACGGGATCACCTCGAAGGTCGCGATGCGCAAGCCGCAGGAC ACGACCAAGGTCAAGCGCGTCATCACGACCGGTCTCGCCAAGATCACGCTCGACGGCGAGGAGGTCAAGCTGCCCAAGCC GGGTGAGACGGTCGACCTCGGCGACGGCAACACCCTCCAGTACCGCGTGGTCAAGCAGAACTGGACCGGCGCAGAGGTCA AGGCGCTGGTGCTGACCCTGCCCGGGCTGATCCCCGGCGGCTCGATCCTCGAGCTGGGCTGGGCCGGCGGTCACATCATC CCGAACTGA
Upstream 100 bases:
>100_bases TTGGTCTTGACCGGCGGCGTCTTTCTCGCTTCGCCCCCTCCCCAGCGATCGAGCACACACGCACAATCGTGGCCAGAAAC CGCTCGGTGGGACCACCGAC
Downstream 100 bases:
>100_bases TCCACCGTTCCCTCGGGTCGAACGCTCCACCTCCGACGCTCGGGCACTGCTGTCCTCCGGGTCAGCAGTGCCCGATCGTC GCGTCGTTCCGGGCCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MGSDKPRPTGRDAAAPATKAGHAVNMSLKRAITTLTVCAAGLAGALVTTTPADAHKASDGDRLVKTNLGYKGTAYGTKVI IDGVEIRNAKEAFAQQRCTRYAGRTVLKNSTLSLPDNELVKVSAATSHTETYAKDGLNGVRGTSTIADLALGGEFQGTQT PTLSLKGLTSVADAFRKADGTFGHQESFSFEGLRIENLPEQIPQELQDLLDILGSTSSDLVTQVLELLTSVTGNTIEIPG LGSIGLAGVKSGSAGPHSAASQTYALRLLVNATGHDTVITLGRARTAISEPVPAGVFHSRAMGLEMFGGNDLLRLGGLQE QSLNCSGSNGKVKTHKIADARVLGGLVNLTGIEYRLMGDQFRNGSANGFVASKIGSLDIPSLGLVIDGITSKVAMRKPQD TTKVKRVITTGLAKITLDGEEVKLPKPGETVDLGDGNTLQYRVVKQNWTGAEVKALVLTLPGLIPGGSILELGWAGGHII PN
Sequences:
>Translated_482_residues MGSDKPRPTGRDAAAPATKAGHAVNMSLKRAITTLTVCAAGLAGALVTTTPADAHKASDGDRLVKTNLGYKGTAYGTKVI IDGVEIRNAKEAFAQQRCTRYAGRTVLKNSTLSLPDNELVKVSAATSHTETYAKDGLNGVRGTSTIADLALGGEFQGTQT PTLSLKGLTSVADAFRKADGTFGHQESFSFEGLRIENLPEQIPQELQDLLDILGSTSSDLVTQVLELLTSVTGNTIEIPG LGSIGLAGVKSGSAGPHSAASQTYALRLLVNATGHDTVITLGRARTAISEPVPAGVFHSRAMGLEMFGGNDLLRLGGLQE QSLNCSGSNGKVKTHKIADARVLGGLVNLTGIEYRLMGDQFRNGSANGFVASKIGSLDIPSLGLVIDGITSKVAMRKPQD TTKVKRVITTGLAKITLDGEEVKLPKPGETVDLGDGNTLQYRVVKQNWTGAEVKALVLTLPGLIPGGSILELGWAGGHII PN >Mature_481_residues GSDKPRPTGRDAAAPATKAGHAVNMSLKRAITTLTVCAAGLAGALVTTTPADAHKASDGDRLVKTNLGYKGTAYGTKVII DGVEIRNAKEAFAQQRCTRYAGRTVLKNSTLSLPDNELVKVSAATSHTETYAKDGLNGVRGTSTIADLALGGEFQGTQTP TLSLKGLTSVADAFRKADGTFGHQESFSFEGLRIENLPEQIPQELQDLLDILGSTSSDLVTQVLELLTSVTGNTIEIPGL GSIGLAGVKSGSAGPHSAASQTYALRLLVNATGHDTVITLGRARTAISEPVPAGVFHSRAMGLEMFGGNDLLRLGGLQEQ SLNCSGSNGKVKTHKIADARVLGGLVNLTGIEYRLMGDQFRNGSANGFVASKIGSLDIPSLGLVIDGITSKVAMRKPQDT TKVKRVITTGLAKITLDGEEVKLPKPGETVDLGDGNTLQYRVVKQNWTGAEVKALVLTLPGLIPGGSILELGWAGGHIIP N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50223; Mature: 50092
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDKPRPTGRDAAAPATKAGHAVNMSLKRAITTLTVCAAGLAGALVTTTPADAHKASDG CCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC DRLVKTNLGYKGTAYGTKVIIDGVEIRNAKEAFAQQRCTRYAGRTVLKNSTLSLPDNELV CEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEE KVSAATSHTETYAKDGLNGVRGTSTIADLALGGEFQGTQTPTLSLKGLTSVADAFRKADG EEEECCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCC TFGHQESFSFEGLRIENLPEQIPQELQDLLDILGSTSSDLVTQVLELLTSVTGNTIEIPG CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCC LGSIGLAGVKSGSAGPHSAASQTYALRLLVNATGHDTVITLGRARTAISEPVPAGVFHSR CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCHHHHHCCCCCCCHHHHH AMGLEMFGGNDLLRLGGLQEQSLNCSGSNGKVKTHKIADARVLGGLVNLTGIEYRLMGDQ HCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHECCCEEEEEECCC FRNGSANGFVASKIGSLDIPSLGLVIDGITSKVAMRKPQDTTKVKRVITTGLAKITLDGE CCCCCCCCEEEECCCCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCC EVKLPKPGETVDLGDGNTLQYRVVKQNWTGAEVKALVLTLPGLIPGGSILELGWAGGHII EEECCCCCCEEECCCCCEEEEEEEECCCCCHHHEEEEEECCCCCCCCCEEEEECCCCCCC PN CC >Mature Secondary Structure GSDKPRPTGRDAAAPATKAGHAVNMSLKRAITTLTVCAAGLAGALVTTTPADAHKASDG CCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC DRLVKTNLGYKGTAYGTKVIIDGVEIRNAKEAFAQQRCTRYAGRTVLKNSTLSLPDNELV CEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEE KVSAATSHTETYAKDGLNGVRGTSTIADLALGGEFQGTQTPTLSLKGLTSVADAFRKADG EEEECCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCC TFGHQESFSFEGLRIENLPEQIPQELQDLLDILGSTSSDLVTQVLELLTSVTGNTIEIPG CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCC LGSIGLAGVKSGSAGPHSAASQTYALRLLVNATGHDTVITLGRARTAISEPVPAGVFHSR CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCHHHHHCCCCCCCHHHHH AMGLEMFGGNDLLRLGGLQEQSLNCSGSNGKVKTHKIADARVLGGLVNLTGIEYRLMGDQ HCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHECCCEEEEEECCC FRNGSANGFVASKIGSLDIPSLGLVIDGITSKVAMRKPQDTTKVKRVITTGLAKITLDGE CCCCCCCCEEEECCCCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCC EVKLPKPGETVDLGDGNTLQYRVVKQNWTGAEVKALVLTLPGLIPGGSILELGWAGGHII EEECCCCCCEEECCCCCEEEEEEEECCCCCHHHEEEEEECCCCCCCCCEEEEECCCCCCC PN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA