Click here to switch to the map view.

The map label for this gene is ywiC [H]

Identifier: 119715909

GI number: 119715909

Start: 1780167

End: 1780985

Strand: Reverse

Name: ywiC [H]

Synonym: Noca_1674

Alternate gene names: 119715909

Gene position: 1780985-1780167 (Counterclockwise)

Preceding gene: 119715913

Following gene: 119715907

Centisome position: 35.72

GC content: 75.7

Gene sequence:

>819_bases
GTGACCGCGCCCGACCACGCACCCCGGAACCGCACCGCACAGCGCACCTCGCTGTTCCCGCCGCAGCACGGCGCGTGGGC
GTTCCTGGGGCTCCCGCTGGCGCTCGGCTTCCTGGTCGGGGACCCGGCCTGGGCCTGGCTGCCGCTCGCCTGGGCGTGGA
TCGCCGCCTACCCGGCGTCGTACTTCGTGCTCAGCTACGTCCGGGCGCGCAGGCCGGAGCGGTTCCGCCGGCCCCTTCTC
GTGTGGGCCGCGCTGTTCGCCCCGGCCGGTCTCGCGGTGGCGGTGATGCGGCCGTGGCTGCTGTGGGTCGCGCTGCTCTA
CCTCGCCTCGTTCGCCGTCAACCTCGCGTACGCCCGGCGCAACCGGGAGCGGGACCTCGTCAACGACGCGGTGTTCGTGG
CCCAGTGCTCGGGGATCGTCGTGGTGACCGGGTTGGTCGGCGACGACCCCGACGAGTCGATGCCCGCGGGACTGCTCGCG
GCCGTGCCGGACCAGGCGTGGCTGCTCGCGCTGGTGTGCGCGGTCGTCCTGCTCGGCTCGACGCTGCACGTGAAGTCGCT
GCTGCGCGAGCGCCGGGACCCGCGGTACGCCCGGGCGTCTCGCGCGTTCGCCGTGGCCTGCCTGCTCGCCTCCCCGCTGC
TCGCGCTCGTCTGGGGGCTGCCGGCGGGCTGGCTCCTGGTACCCGGCTTCGCGGTGCTCGCGGCCCGTGCGCTGCGCCGC
GACTGGTCCGGGATGCGGCCCGGCACCATCGGCATGGTCGAGCTCGGGGGGTTCGTGGTCGTGCTCGCGGCAGCGGGCGC
GGCCGTGGCGGTCGCCTGA

Upstream 100 bases:

>100_bases
ACCATCGTACACAGCAATCGCCCAGGGGTCCGCATTCCCTGTGGTCCGGCGCACACGCGGTGGCACCACGGATCGCTGCC
CAGGCTCCTAGGCTCGAGTC

Downstream 100 bases:

>100_bases
GCGACCGCCACGGCCGTCCCCCTCGCCCTCGCCGGCCGCCGGAGTCGGGACGACCGACGTGTGGGGGGTCAGGGCAGCTG
GACGTGGCGGTGGCGCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTAPDHAPRNRTAQRTSLFPPQHGAWAFLGLPLALGFLVGDPAWAWLPLAWAWIAAYPASYFVLSYVRARRPERFRRPLL
VWAALFAPAGLAVAVMRPWLLWVALLYLASFAVNLAYARRNRERDLVNDAVFVAQCSGIVVVTGLVGDDPDESMPAGLLA
AVPDQAWLLALVCAVVLLGSTLHVKSLLRERRDPRYARASRAFAVACLLASPLLALVWGLPAGWLLVPGFAVLAARALRR
DWSGMRPGTIGMVELGGFVVVLAAAGAAVAVA

Sequences:

>Translated_272_residues
MTAPDHAPRNRTAQRTSLFPPQHGAWAFLGLPLALGFLVGDPAWAWLPLAWAWIAAYPASYFVLSYVRARRPERFRRPLL
VWAALFAPAGLAVAVMRPWLLWVALLYLASFAVNLAYARRNRERDLVNDAVFVAQCSGIVVVTGLVGDDPDESMPAGLLA
AVPDQAWLLALVCAVVLLGSTLHVKSLLRERRDPRYARASRAFAVACLLASPLLALVWGLPAGWLLVPGFAVLAARALRR
DWSGMRPGTIGMVELGGFVVVLAAAGAAVAVA
>Mature_271_residues
TAPDHAPRNRTAQRTSLFPPQHGAWAFLGLPLALGFLVGDPAWAWLPLAWAWIAAYPASYFVLSYVRARRPERFRRPLLV
WAALFAPAGLAVAVMRPWLLWVALLYLASFAVNLAYARRNRERDLVNDAVFVAQCSGIVVVTGLVGDDPDESMPAGLLAA
VPDQAWLLALVCAVVLLGSTLHVKSLLRERRDPRYARASRAFAVACLLASPLLALVWGLPAGWLLVPGFAVLAARALRRD
WSGMRPGTIGMVELGGFVVVLAAAGAAVAVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1626 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29336; Mature: 29205

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPDHAPRNRTAQRTSLFPPQHGAWAFLGLPLALGFLVGDPAWAWLPLAWAWIAAYPAS
CCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YFVLSYVRARRPERFRRPLLVWAALFAPAGLAVAVMRPWLLWVALLYLASFAVNLAYARR
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRERDLVNDAVFVAQCSGIVVVTGLVGDDPDESMPAGLLAAVPDQAWLLALVCAVVLLGS
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCC
TLHVKSLLRERRDPRYARASRAFAVACLLASPLLALVWGLPAGWLLVPGFAVLAARALRR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DWSGMRPGTIGMVELGGFVVVLAAAGAAVAVA
HCCCCCCCCEEHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
TAPDHAPRNRTAQRTSLFPPQHGAWAFLGLPLALGFLVGDPAWAWLPLAWAWIAAYPAS
CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YFVLSYVRARRPERFRRPLLVWAALFAPAGLAVAVMRPWLLWVALLYLASFAVNLAYARR
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRERDLVNDAVFVAQCSGIVVVTGLVGDDPDESMPAGLLAAVPDQAWLLALVCAVVLLGS
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCC
TLHVKSLLRERRDPRYARASRAFAVACLLASPLLALVWGLPAGWLLVPGFAVLAARALRR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DWSGMRPGTIGMVELGGFVVVLAAAGAAVAVA
HCCCCCCCCEEHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8846791; 9384377 [H]