| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715888
Identifier: 119715888
GI number: 119715888
Start: 1755422
End: 1755973
Strand: Reverse
Name: 119715888
Synonym: Noca_1653
Alternate gene names: NA
Gene position: 1755973-1755422 (Counterclockwise)
Preceding gene: 119715889
Following gene: 119715886
Centisome position: 35.22
GC content: 71.2
Gene sequence:
>552_bases ATGTTCCACCTGCACCACCGGCCCGAACCGGGTCCCCAGCTGACTCCCTGGGGCTTCTACGCCCGACCTCCCGCGAAGTC CCACGACCCGTTGCGCATCGTCGCGATCGGCCTGGTCCTCTCGATGATCCTGCTGGTCGGCGGCTGCTTCGCCGTCGTCG GTGGGCTCGCCCACCAGATGGGAACCGCGTTCCAGGCGGCCCCCGCACCCGTCGTCGACGTGGTGCGGACGGAGGTGCAG GAGGGCGAGGCCTTCCTCCTGGCGGGCTTCCAGGTCGCGAGCGACTGGACGGTCGCGCAGGAGGCGGCCCACGCGGTCAC GGCCACCGCGCCCCACATCACGATCACCGGCCTGGAGGTCACGAACACCGGCGACACCGCCCGGATGCTGCGCTACGCGT TCACCTTCCGCGGCCATGCCGAGTGGCTGGCGGAGATCGACTGCTACTGCCCCGCCGTGCTGCCGGGCCAGACGGTGCTC ATGCAGTGCCGGCCGACGGTCCCGCGGATGCCGCTCGACTACGACTCCGTCGTGGTCGCCGACGGCTACTGA
Upstream 100 bases:
>100_bases TTGTAGATCACGCAAAAGGACGCGGGTTCGGCTGCGCCGCGGCCACCCCGGGAATAGCGTGGATCGACCGGGCACCCCGC CCGCAGGAAGCCGCGGCAGC
Downstream 100 bases:
>100_bases GCCTCGGCCGCGTCCTCGGAGCGCCCGCGGACGCGCCGGATCTCAGCGCAGCGAGCGCCTCCGCGCGACCACACTGCCGA GGCCCGTGGCCGCGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MFHLHHRPEPGPQLTPWGFYARPPAKSHDPLRIVAIGLVLSMILLVGGCFAVVGGLAHQMGTAFQAAPAPVVDVVRTEVQ EGEAFLLAGFQVASDWTVAQEAAHAVTATAPHITITGLEVTNTGDTARMLRYAFTFRGHAEWLAEIDCYCPAVLPGQTVL MQCRPTVPRMPLDYDSVVVADGY
Sequences:
>Translated_183_residues MFHLHHRPEPGPQLTPWGFYARPPAKSHDPLRIVAIGLVLSMILLVGGCFAVVGGLAHQMGTAFQAAPAPVVDVVRTEVQ EGEAFLLAGFQVASDWTVAQEAAHAVTATAPHITITGLEVTNTGDTARMLRYAFTFRGHAEWLAEIDCYCPAVLPGQTVL MQCRPTVPRMPLDYDSVVVADGY >Mature_183_residues MFHLHHRPEPGPQLTPWGFYARPPAKSHDPLRIVAIGLVLSMILLVGGCFAVVGGLAHQMGTAFQAAPAPVVDVVRTEVQ EGEAFLLAGFQVASDWTVAQEAAHAVTATAPHITITGLEVTNTGDTARMLRYAFTFRGHAEWLAEIDCYCPAVLPGQTVL MQCRPTVPRMPLDYDSVVVADGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19748; Mature: 19748
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHLHHRPEPGPQLTPWGFYARPPAKSHDPLRIVAIGLVLSMILLVGGCFAVVGGLAHQM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTAFQAAPAPVVDVVRTEVQEGEAFLLAGFQVASDWTVAQEAAHAVTATAPHITITGLEV CCHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEE TNTGDTARMLRYAFTFRGHAEWLAEIDCYCPAVLPGQTVLMQCRPTVPRMPLDYDSVVVA ECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE DGY CCC >Mature Secondary Structure MFHLHHRPEPGPQLTPWGFYARPPAKSHDPLRIVAIGLVLSMILLVGGCFAVVGGLAHQM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTAFQAAPAPVVDVVRTEVQEGEAFLLAGFQVASDWTVAQEAAHAVTATAPHITITGLEV CCHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEE TNTGDTARMLRYAFTFRGHAEWLAEIDCYCPAVLPGQTVLMQCRPTVPRMPLDYDSVVVA ECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE DGY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA