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The map label for this gene is int [H]

Identifier: 119715851

GI number: 119715851

Start: 1714744

End: 1715850

Strand: Reverse

Name: int [H]

Synonym: Noca_1615

Alternate gene names: 119715851

Gene position: 1715850-1714744 (Counterclockwise)

Preceding gene: 119715852

Following gene: 119715848

Centisome position: 34.41

GC content: 66.76

Gene sequence:

>1107_bases
ATGGCGTGGATCAAGACCCGGGTCACCGACGACGGCGACACACGGTTCGTTGCCTGCTACCGCGACCCGGAGGGACGGCA
ACGCTCCGCTGGCACCTTCTCCTCCCGGCGTGCCGCCGAACGCGCCGCCCACCGGGAGGAGGCCAAGGTCAGGGAGGGCG
CGTGGCACGACCACTCCCGCGGTCAGGTCACCTTCGCCGAGTACGTCGAGACCGTGTGGCTGCCGTCCAAGCACGTCGAG
ACCTCCACCTTGGCCGCCTACCGCTCCTACCTCGACAGGCACTTCATCCCCACCTTCGGACGCCGGCCGATGGGCAAGAT
CCTGCCCTCGGAGATCCAGCGCTGGGTCACCACCGCCACCGAGCACGGCCTCTCGCCCGCCAGTGTGCGGAAGTACCACA
CGATGCTGCACTCGGTGTTCGAACGAGCCCTGCGCGACCGGGTGGTCACCTTCAACCCCTGCGTCCACACTGAGCTCCCG
AAGGTGGTCAAGAAGAAGGCCCGCACGCTCACGCCCGAGGAGTACGTCGCCATCCTGACCGCCCTCCCCGAACAGCATCG
GCTGATGGTCGAGACCGCCATCAACACCGGCCTCCGGTGGGGTGAGCTCATCGCGCTCAAGCCCCGTCACCTCGACCTCA
TCAAGCGCCAACTGACGGTCGAAGAGACAGTCGTGGAGGTTTCGATCAAGAACTCCCCCACCGGCCACCGGATGCTCACT
AAGCCCTACCCCAAGGACAACGAGGCCCGCACCATGGGCCTCCCGGCAGACCTCGTGGATCAGCTCGCCGACTGGATCAC
CACCCGGCGGCTCCGGCTAGATGATCTGCTGTTCGCGACCCGCGAGGGAACCCCGATCTCACGCAACACGTTCCGCACCC
GCGTCTGGCTGCCCGCCATACGAGCGTCCGGAGTCGACTTCGACGTCCGCGTCCACGACCTCCGCCACGCACACGCATCC
TGGCTCCTCGCAGGCGGCTCCGACCTCAAGTCCGTCATGGACCGGATGGGCCACGCCCAGATCACCACCACCCAGAAATA
CCTGCATGCCCTTCCCGACGCCGACGCCAAGAACCTCGACGCCCTCAACCGCATCCGCAATTCCTGA

Upstream 100 bases:

>100_bases
AATCTGTTTCCGCGACTCTTCGCTCGCCTTCGCCGGCCTTCGGGGCAACGTTTGCGGACACTGTGCGGACATCAATTCTC
AGACCTCTTGGGGAGGCGCC

Downstream 100 bases:

>100_bases
CCCGATTCCCACCGGCCCGCGACCGTCTGGATGAACGCGGATTGGGCGACCGGCCTCACGAGCTTCGTCCGCGGACTGAC
GCGCAAGAGGAGTCGCGGAT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MAWIKTRVTDDGDTRFVACYRDPEGRQRSAGTFSSRRAAERAAHREEAKVREGAWHDHSRGQVTFAEYVETVWLPSKHVE
TSTLAAYRSYLDRHFIPTFGRRPMGKILPSEIQRWVTTATEHGLSPASVRKYHTMLHSVFERALRDRVVTFNPCVHTELP
KVVKKKARTLTPEEYVAILTALPEQHRLMVETAINTGLRWGELIALKPRHLDLIKRQLTVEETVVEVSIKNSPTGHRMLT
KPYPKDNEARTMGLPADLVDQLADWITTRRLRLDDLLFATREGTPISRNTFRTRVWLPAIRASGVDFDVRVHDLRHAHAS
WLLAGGSDLKSVMDRMGHAQITTTQKYLHALPDADAKNLDALNRIRNS

Sequences:

>Translated_368_residues
MAWIKTRVTDDGDTRFVACYRDPEGRQRSAGTFSSRRAAERAAHREEAKVREGAWHDHSRGQVTFAEYVETVWLPSKHVE
TSTLAAYRSYLDRHFIPTFGRRPMGKILPSEIQRWVTTATEHGLSPASVRKYHTMLHSVFERALRDRVVTFNPCVHTELP
KVVKKKARTLTPEEYVAILTALPEQHRLMVETAINTGLRWGELIALKPRHLDLIKRQLTVEETVVEVSIKNSPTGHRMLT
KPYPKDNEARTMGLPADLVDQLADWITTRRLRLDDLLFATREGTPISRNTFRTRVWLPAIRASGVDFDVRVHDLRHAHAS
WLLAGGSDLKSVMDRMGHAQITTTQKYLHALPDADAKNLDALNRIRNS
>Mature_367_residues
AWIKTRVTDDGDTRFVACYRDPEGRQRSAGTFSSRRAAERAAHREEAKVREGAWHDHSRGQVTFAEYVETVWLPSKHVET
STLAAYRSYLDRHFIPTFGRRPMGKILPSEIQRWVTTATEHGLSPASVRKYHTMLHSVFERALRDRVVTFNPCVHTELPK
VVKKKARTLTPEEYVAILTALPEQHRLMVETAINTGLRWGELIALKPRHLDLIKRQLTVEETVVEVSIKNSPTGHRMLTK
PYPKDNEARTMGLPADLVDQLADWITTRRLRLDDLLFATREGTPISRNTFRTRVWLPAIRASGVDFDVRVHDLRHAHASW
LLAGGSDLKSVMDRMGHAQITTTQKYLHALPDADAKNLDALNRIRNS

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=276, Percent_Identity=24.2753623188406, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789261, Length=297, Percent_Identity=24.5791245791246, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42058; Mature: 41926

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWIKTRVTDDGDTRFVACYRDPEGRQRSAGTFSSRRAAERAAHREEAKVREGAWHDHSR
CCCEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GQVTFAEYVETVWLPSKHVETSTLAAYRSYLDRHFIPTFGRRPMGKILPSEIQRWVTTAT
CCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHH
EHGLSPASVRKYHTMLHSVFERALRDRVVTFNPCVHTELPKVVKKKARTLTPEEYVAILT
HCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ALPEQHRLMVETAINTGLRWGELIALKPRHLDLIKRQLTVEETVVEVSIKNSPTGHRMLT
HCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHEEEEEEECCCCCCCEECC
KPYPKDNEARTMGLPADLVDQLADWITTRRLRLDDLLFATREGTPISRNTFRTRVWLPAI
CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHH
RASGVDFDVRVHDLRHAHASWLLAGGSDLKSVMDRMGHAQITTTQKYLHALPDADAKNLD
HHCCCCEEEEHHHHHHHHHHEEEECCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHH
ALNRIRNS
HHHHHHCC
>Mature Secondary Structure 
AWIKTRVTDDGDTRFVACYRDPEGRQRSAGTFSSRRAAERAAHREEAKVREGAWHDHSR
CCEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GQVTFAEYVETVWLPSKHVETSTLAAYRSYLDRHFIPTFGRRPMGKILPSEIQRWVTTAT
CCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHH
EHGLSPASVRKYHTMLHSVFERALRDRVVTFNPCVHTELPKVVKKKARTLTPEEYVAILT
HCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ALPEQHRLMVETAINTGLRWGELIALKPRHLDLIKRQLTVEETVVEVSIKNSPTGHRMLT
HCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHEEEEEEECCCCCCCEECC
KPYPKDNEARTMGLPADLVDQLADWITTRRLRLDDLLFATREGTPISRNTFRTRVWLPAI
CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHH
RASGVDFDVRVHDLRHAHASWLLAGGSDLKSVMDRMGHAQITTTQKYLHALPDADAKNLD
HHCCCCEEEEHHHHHHHHHHEEEECCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHH
ALNRIRNS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]