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The map label for this gene is algA [H]

Identifier: 119715832

GI number: 119715832

Start: 1696103

End: 1696507

Strand: Reverse

Name: algA [H]

Synonym: Noca_1596

Alternate gene names: 119715832

Gene position: 1696507-1696103 (Counterclockwise)

Preceding gene: 119715833

Following gene: 119715831

Centisome position: 34.03

GC content: 67.65

Gene sequence:

>405_bases
ATGAGGACCTGGAGGTTTCGAGAGCCGTCGGCCGCCATCACCAGCCTCGCGCGGAGGCAGGCCGACGTACGCCCGTGGGG
CGACTGGCTCGTTCTAGATGAAGGCCCCGGCTTCAAGGTGAAGCGACTTCACGTCCACCCCCACGCCCGCTTGTCCCTGC
AGCAGCACCACTTCCGAGCCGAGGCCTGGATAGTGGTGGCCGGAATCGCCACCTGCCAGGTCGGCACTCGCTCCTGGCTG
GCATCGCCGGGGGAGACGGCGCACGTACCTCGCTGCTCAGCACATCGACTCGCGAACCAGCACGACGAGGAACTCCTGGT
GATCGAGGTGCAGTGGGGGGCAGAAACGCGCGAGGACGACATCGTCAGGCTCGCTGACGACTACGGCCGGGCCGGCGTCG
CGTGA

Upstream 100 bases:

>100_bases
TTCCGCTTCTGGAGCTACCGGCGGTTCGTCTTCACCGACCCGAACGTGTAACCCCTTGCTGTCAGGTGCGTGTCAGCATC
GGGTTCCTAGCTTTAGGAGC

Downstream 100 bases:

>100_bases
TCGGCCTTCCGGCGCCCCTCCCCCGCCAACGCCTCGCCAGCACCTCGCCCCCCACGCAGCCCCCCGTGGGCCCGTCGTGA
GCGGCCATCTCGACGCGCTG

Product: mannose-6-phosphate isomerase, type II

Products: NA

Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; GMP; GMPP; GTP--mannose-1-phosphate guanylyltransferase [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRTWRFREPSAAITSLARRQADVRPWGDWLVLDEGPGFKVKRLHVHPHARLSLQQHHFRAEAWIVVAGIATCQVGTRSWL
ASPGETAHVPRCSAHRLANQHDEELLVIEVQWGAETREDDIVRLADDYGRAGVA

Sequences:

>Translated_134_residues
MRTWRFREPSAAITSLARRQADVRPWGDWLVLDEGPGFKVKRLHVHPHARLSLQQHHFRAEAWIVVAGIATCQVGTRSWL
ASPGETAHVPRCSAHRLANQHDEELLVIEVQWGAETREDDIVRLADDYGRAGVA
>Mature_134_residues
MRTWRFREPSAAITSLARRQADVRPWGDWLVLDEGPGFKVKRLHVHPHARLSLQQHHFRAEAWIVVAGIATCQVGTRSWL
ASPGETAHVPRCSAHRLANQHDEELLVIEVQWGAETREDDIVRLADDYGRAGVA

Specific function: Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics [H]

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788362, Length=107, Percent_Identity=42.9906542056075, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR006375
- InterPro:   IPR001538
- InterPro:   IPR005835
- InterPro:   IPR014710 [H]

Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]

EC number: =5.3.1.8; =2.7.7.13 [H]

Molecular weight: Translated: 15173; Mature: 15173

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTWRFREPSAAITSLARRQADVRPWGDWLVLDEGPGFKVKRLHVHPHARLSLQQHHFRA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEHHHHCCCC
EAWIVVAGIATCQVGTRSWLASPGETAHVPRCSAHRLANQHDEELLVIEVQWGAETREDD
EEEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCC
IVRLADDYGRAGVA
EEEEECCCCCCCCC
>Mature Secondary Structure
MRTWRFREPSAAITSLARRQADVRPWGDWLVLDEGPGFKVKRLHVHPHARLSLQQHHFRA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEHHHHCCCC
EAWIVVAGIATCQVGTRSWLASPGETAHVPRCSAHRLANQHDEELLVIEVQWGAETREDD
EEEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCC
IVRLADDYGRAGVA
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3089876; 10984043; 1846611 [H]