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The map label for this gene is 119715829

Identifier: 119715829

GI number: 119715829

Start: 1692831

End: 1693385

Strand: Reverse

Name: 119715829

Synonym: Noca_1593

Alternate gene names: NA

Gene position: 1693385-1692831 (Counterclockwise)

Preceding gene: 119715830

Following gene: 119715826

Centisome position: 33.96

GC content: 65.77

Gene sequence:

>555_bases
ATGGCTTGGGTGGTCGAGCGCAAGAGGGACGACGGAACGTCGCGCTTCCTGGCCCAGTACCGGGACCCAGGCGGTCGGAT
CCGCTCCGCCGGCACGCACTCGTCGCGCCGCGCAGCCGAGCGCGCCGGCAACCGCGAGGAGCAACTGGTCCACGCCGGCT
CGTGGTTCGACCGCTCGCTGGGCGCCATCCCGTTCCAGGAGTACGTCGAGAAGCACTGGCTGCCGAGCAAGCACATCGAG
GCCACCACGCTGGCCGCCTACATGTCGAACCTCAACAAGCACTTCTTCCCGTTCTTCGGCAAGAAGCCGATGTACCAGAT
CACCTCGTCGCTCGTGCAGGACTGGGTGACCCAGGCAGCCGCCGAGGGACTCTCGGCCAGGTCGATCCGCAAGTACCACA
CGATGCTCCACTCCATCTTCAAGCGGGCCGTCCGCGACCAGCTGATCATCAGCAACCCGTGTGAGCACACCGAGCTGCCG
AAGATCGTCACCAAGAAGACCCGGACGCTGACGCCCGACGAGTTCGACGTCCTTATCACCGCGGTGCCGGACTGA

Upstream 100 bases:

>100_bases
GCAGGTCAGAGTATGTTTTTGAGTTTCCGCGAACCTTCGCCGGCCTTCGCCCTCCTTCGGCAACGTTTGCTGATTCTCTG
CTGACATTGGAGGTACGGCG

Downstream 100 bases:

>100_bases
AGCGCCTCAGGTTCTGTGCCGCTCCTATGCGGGTTGCGGCTCTCGGTTGAGAGTCGCGTAGTGGGCCTGCTCGAACTCCA
CTGGGGTCATCATCCCAAGC

Product: putative tyrosine recombinase XerD

Products: NA

Alternate protein names: Tyrosine Recombinase XerD; Phage Integrase Family Protein

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAWVVERKRDDGTSRFLAQYRDPGGRIRSAGTHSSRRAAERAGNREEQLVHAGSWFDRSLGAIPFQEYVEKHWLPSKHIE
ATTLAAYMSNLNKHFFPFFGKKPMYQITSSLVQDWVTQAAAEGLSARSIRKYHTMLHSIFKRAVRDQLIISNPCEHTELP
KIVTKKTRTLTPDEFDVLITAVPD

Sequences:

>Translated_184_residues
MAWVVERKRDDGTSRFLAQYRDPGGRIRSAGTHSSRRAAERAGNREEQLVHAGSWFDRSLGAIPFQEYVEKHWLPSKHIE
ATTLAAYMSNLNKHFFPFFGKKPMYQITSSLVQDWVTQAAAEGLSARSIRKYHTMLHSIFKRAVRDQLIISNPCEHTELP
KIVTKKTRTLTPDEFDVLITAVPD
>Mature_183_residues
AWVVERKRDDGTSRFLAQYRDPGGRIRSAGTHSSRRAAERAGNREEQLVHAGSWFDRSLGAIPFQEYVEKHWLPSKHIEA
TTLAAYMSNLNKHFFPFFGKKPMYQITSSLVQDWVTQAAAEGLSARSIRKYHTMLHSIFKRAVRDQLIISNPCEHTELPK
IVTKKTRTLTPDEFDVLITAVPD

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21070; Mature: 20939

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWVVERKRDDGTSRFLAQYRDPGGRIRSAGTHSSRRAAERAGNREEQLVHAGSWFDRSL
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHC
GAIPFQEYVEKHWLPSKHIEATTLAAYMSNLNKHFFPFFGKKPMYQITSSLVQDWVTQAA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AEGLSARSIRKYHTMLHSIFKRAVRDQLIISNPCEHTELPKIVTKKTRTLTPDEFDVLIT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEE
AVPD
ECCC
>Mature Secondary Structure 
AWVVERKRDDGTSRFLAQYRDPGGRIRSAGTHSSRRAAERAGNREEQLVHAGSWFDRSL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHC
GAIPFQEYVEKHWLPSKHIEATTLAAYMSNLNKHFFPFFGKKPMYQITSSLVQDWVTQAA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AEGLSARSIRKYHTMLHSIFKRAVRDQLIISNPCEHTELPKIVTKKTRTLTPDEFDVLIT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEE
AVPD
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA