| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is dnaG [H]
Identifier: 119715816
GI number: 119715816
Start: 1673181
End: 1678574
Strand: Reverse
Name: dnaG [H]
Synonym: Noca_1580
Alternate gene names: 119715816
Gene position: 1678574-1673181 (Counterclockwise)
Preceding gene: 119715817
Following gene: 119715815
Centisome position: 33.67
GC content: 70.54
Gene sequence:
>5394_bases GTGATCGGCGGGCCTTTTTGCGCCCGTGGGAACTGTCCTTTCGCCCGGCACCGCGCGCTTGAAGGCGTCGTGATGAGTCT GCGGAAGCTGACCGCGGGTGACGGCTACAGCTACCTCACCCGCCAGGTCGCCGCGCACGACACCACCGAGAAGGGCCACA CGAGCCTCGCGGACTACTACGACGAGAAGGGCGAGTCGCCCGGCCGGTGGATGGGCTCGGGACTCACGGGACTGGGAATG AACTCCGGCCAGGGGGTCACGGCGCAGCAGATGAAGGCGCTCTACGGGTTGGGCATCCATCCGGACGCGGCGAACATCGA GGAGCGCCTCGCCGAGCAGGGCGCCAGCCGCGCCGAGGTCGAGGCGGCGATCGCCCTCGGCAAACGATTCCCGATCCACG ACACGGCTTCGACCTTCAACGTCCGTGTCGCGGAGGCCTTCACGGCGTACAACGCACAACACCGCCAGAAGTGGAATGCC CCGATCCGGCCCGAGGAAAGAGCACGCATCCGGACCCAGATCGGCACGGCGATGTTCGTCGAGGGCCACGGCCGCGAGCC GCAGGACGCCCGCGAGCTGTCCGGGTTCATCGCCAAGGCTTCACGCCAGCCGACCAGCGCGGTCGCCGGGTTTGATCTCA CCTTCTCTCCGGTCAAGTCCGTCTCGGCGCTTTGGGCTCTGGCCCCCAAGGAGGTTGCCGCGGACATCCGCGCGGCGCAC GACGCTGCCGTTGTCGACACGCTGACGTGGCTGGAGCGCGAGGTCGCGCACACTCGCGTCGGCAGCGGCGGCGTCAGGCA GGTCAAGGTCCGCGGTCTCGTCGCCGCTGCCTTCACGCACCGCGACAGTCGTGCCGGCGACCCCGATCTCCACACGCATG TTGCCGTCAGCAACAAGGTGCAGGCCGAGGACGGACATTGGCTCGCCCTCGACGGTCGCCTGCTGTACGCGGCCAAGGTG ACAGCCTCCGAGCACTACAACACCCGCGTCGAGGCCGAGCTGGTCGCGCGGCTGGGAGTCGAGTTCGCGGACCGGGACGA CACGGTCGGTGGCAAGGTTCCCGTCCGGGAAATCCGCGGTGTCAGCACCACGCTCACGCGCTGGTGGTCCCGTCGCCGAG TCGCGATCGAGGCCCGTCAGGCCGAGATCGCAGCCGAGTTCCAAGGGCGCTTCGGGCGCCCACCGACCGCCATCGAGGCG AAGAGCCTCGCCGACCAGGCGACTCTGGAGACGCGCGACGCCAAGCACGGCCGCCGCAGCGAGCGCGAGCAGCGGGACGA GTGGCGGGCCGAAGCCGACGACGTCCTGGGCGACCCTGCCGAGGTCGACGAGATGTACTCCCGGGCGGTCGGCCGCCGGA ACGGTGGCCGGACGGCGACGCGAGACTGGGTCGAGGACGTCGCCGCGGCGACGATCGCTTTCGTCGAGGAGTCACGAGCG ACGTGGAACGTGTGGCATCTCCTCGCCGAAGCCCAGCGCCAGGCACGGCGTGCAGGCATCGCCCGCGATGACGTCGACCG GGCCGTTGACCAGGTCGTTGATGCCGCGATCTCCCGGTCCGTCAGGCTGGGAGTCGACGACCCGATCTCCGAGCCGCCCC CGCTGCAGCGCCCGGATGGCGCGAGCGTGTACGACGTCCACGGCGCGACGCTCTACACGTCGGCCAAGGTTCTGCTCGCC GAGGAGGAGATCCTCAACCTCGCCGGGCGAACCGGAGGACACGCGCTCGCCGACGTACGCGTCGAAGTGGCCATCGCAGG CGCCGCGGCCAACGGATTCGAGCTCAACGACGCCCAGGCGGCGATGGCGCGCGACCTCGCCACGTCCGGCGCCGTCGTCC AGCTCGCCCTCGCTCCCGCTGGGACCGGCAAGACCACCACCATGAGCGTCCTCGCCGACGCGTGGGCAGCGGGCGGCGGC CAGGTGATCGGGCTGGCGCCGTCGGCGCAAGCCGCCCATGAGCTCGGCCAGGCCGTCAGCGGCTACACCGACACCCTCGC CAAGCTGACCTGGACGTTGGCCAACGAGCCGTCCGTTGCTTGGCCCCGCTGGATCCGCGACATCGGGCCGCAGTCGCTGG TCATCGTCGACGAAGCCGGACAGGCGGCCACCACTGAGTTGGCCGCCGCCGTGCGCTTCGTCGCCGAGCGCGGCGGCGCC GTACGACTCATCGGCGACGACCAGCAGCTCGCCGCAGTCGGAGCTGGCGGTGTCCTGCGCGACATCCAGCAGCAGTACGG CGCCTCGACCCTTTCCGAGGTCCGCCGCTTCGACGACCCGGCCGAGGCGGCCGCGACCCTCGCGGTGCGCGAAGGCGACG CGGCCGCACTCGGGTTCTACGCCGACAACGCGAGGATCCACGTGGGCGACCTGAGCGCGGTGGCCGACCAGGCGTACGAC AGCTGGGCGTCCGATCGCGCCGCCGGGCTGGACTCGGTACTCCTCGCTCCGACACGCGAACTCGTCTGCCAGCTCAACGC TCGCGCCCGGGCCGACCGGCTCACGGCGACCGCCACTGTTGGTCCGGAAGTCGACCTCGCCGACGGCAACCGAGGCTCTG TCGGCGACGTGATCGTCACGCGGCGCAACAGCCGGCGGCTCGTCGTCTCCCGGAGCAACTGGGTCAAGAACGGCGACCGC TGGCGCATCGAGAAGGTCCTGGGCGACGGCGGCCTCCTCGCCCGACACCTCGAGCTCGGTCGCACTGTCGAGCTCCCGCT CGACTACGTCGCCCAACACGTCCATCTCGGCTACGCGACGACGGTCCACGGCGCGCAGGGCATGACGGCCGACACCGCAC ACCTCGTCGCGGCGGGCGAGGAGACGAGGCAGACGCTGTACGTCGGCATCTCCCGCGGCCGCCAGGCGAACCACATCTAC CTCGACACCGGGTACGACGGGGACCCACACAGCCTCATCGACCCGAAGGCACTCCGTCCACCCACGGCGATCGACATTCT CGCCGAGATCCTTGAACGCGACGGCTCCGACCGCTCCGCCACGACCACGCAGCGCGAGGCATCGGCGTACACGACCCAGT TCCACGACGCCGTCATGCGCTACCACGACGCCCTCGGCTACGCCGCCGAGGACGTGCTCGGCGCCGACTCGCTGGCGAGC ACGAACCGGGAGGTCGAGGCGATCTGGCCGGGGCTCACCAGCGAACCGGCGTACCCGACATTGCGTGGGCACCTTGCCCT GCGAACCGTCGACGGAGCAGACCCCGTCGCCACGCTGCTCGACGCCGCCAACGAGCGCGAGCTCGGCACCTCCGACGACC GTGCGGCCGTCCTCGACTGGCGGCTCGGCAAGGCTGCGGCCGGCCCCCTGCCATGGCTCGACGGCGTGCCAGAACGGCTC GCCGACCACGCGACCTGGGGTCCCTACCTCCGCAGTCGCTTCGAACGGATCACGACCCTCGCTGGCGCTGTCCGGGGTGA AGCCGAGGCGTGGACCCCGACAGCAACGCCTCCGTGGGCCTCAGGACTCACCGCAGCCGAGCACTCGGCACTGCGCGGCG ACCTCTCGGTCTGGCGCGCAGCGTTCGACGTCCCCGAGGACCACGCCCGTGCCACCGGCCCCGTGCAGCCGGGGGCGTCG ACTGCGCCCCACCAGCAGGACCTCGAACGCCGGGTGCGCTCGGTGCTGGGCGTCCACCGCGCCGACGACGAACTTCTCGA ACTCATGCCAGAGGAAGTCCGGACGGACGCCGAATTCGGCCGCCTCTCGGAGCGACTCGGGGCACTGCAGGCGGCACACG TCGATGTCGGCCCACTGATGGACCGAGCCCTCAACACGGTCCACCCGCTTCCCGACGAGCGCACGGCCGACGCTCTCTGG TGGCGAATCGTGCGTCATCTCGGCCCTGCCGCCCTGCGCGCGTCGGCCAACCAGGCTCACACGCTCCGACCCAGCTGGAC CTCACACCTCAGTGAGCGACTCGGTGAGGCGACCTGTGAGCGAGTCATGGCCGACGCGATGTGGCCGGCCCTGGTCGCGG CCATCCACGCGCGCCCCGCCGAGTGGACTGCCGAGCAACTGATCGATGCCGCGACCTCGGGCCACGGTCCCGACGTACGG CCTGAGGAACTGTGCTCGGCGCTGGTGTGGCGCATCGCCACCATGACGGACGCACCGTTCGCCGAGCCGGAGCCGCCCGA GCCCGACTTCTCTCAGCCGGAGCCGACACCGGTTGCGCCGATCCCGGCAATGAACGAGCCCGGGGCGCCCGCCGAGCGGA TCATCGAGCTGAACCACTGGGCGCTCGACCACTACTCAGCCATGTACCCCAAGTCGTGGGCACCCGACTACCTCCGCGAC CGCCTTGGAAACGACCTCACGGACGACCCGCGCTACCAGGTCGGGTACGCCCCGCCCGGGCCGACCAGCCTGATCCAGCA CCTGGCTACGCGGGGCACCAGCGAGGAAGAACTACTCGACGCCGGACTCGCACGGCGAACAGAGCGCGGGCACCTGGTCG ACGCCTTCCGCGACCGGCTGGTCTTCCCGATCTACTCCGGCAGCGATCTCGTGGGCTTCATCGGCCGCCGCAACCCGACC AAGCCGGACGGCGAGTTCTCCGGCCCGAAGTACCTGAACACCCGGAGCACCGCGGTGTTCGCCAAGGGCGAGGCACTCTT CGGCCTGACCGAGGCCACCGCTGACCTGGACGCGGGCTCGACGCCGGTACTCGTCGAGGGCCCCATGGACGCCATCGCCG TGACCCTGGCCTCGGGCGGCGAGTACGTCGGCATCGCGCCGCTCGGCACGGCCTTCACCGAGACCCAGGCCGCCACGCTG AAGCCGCATCTACGTGAGGCGCCGAGCAACATCGTGATCGCAACCGACCCCGACTCGGCTGGATGGCAGTCGGCCCAGCG AGCGTTCTGGCGTCTCGCGGCTCTTCGCGCAGCGCCTCGACATCTCACTCTTCCGGAAGGTGTCGACCCTGCCGATGCTC TGCGCAAGCACGGCAAGGCCGCCCTCCGGACGGGACTCGCCGATTCGCGGGACTTCGCCCTGGTGCTCGTCGATCGCGTA CTCGACGATCGCTTGGCGACCCACGACGACGCCTTCGCACGGGTGGACCACTGCCGAGAGGCAGCCCGCACCATCGGAAC GCTGGCACCCGACCGCTGGCTGGCGTACGCCCAGCACGCATCGGAACGGCTCGACCTTCCGCTACAGGCGGTCATCGATG AAGTTCTCGAAGCCGGTGCGGAGTGGACAGACGACCCTCGGGCCTGTGCTTCTCGCGAACTTGCTCGACTCGGGGTCTCC GCGGCCGCGCCGAAGGCTACCCATCGCGAACGCGTGATGGAGCCGCCCGCAGCGACGTCCGAGCACTGTCCCATTCACCT CTCGCGTCCCCCAAGTCCCGCCGTCGAGCGGTGA
Upstream 100 bases:
>100_bases GCCTGGTCCGCCCTCACCGCTGCCTGACCCCTCCGCCCTGCTCGACCTCCTTGCCTCACCTTCCAGCGGAAGACCACAGC CACACACCCTTTGCACTGAC
Downstream 100 bases:
>100_bases GCCGCATGCCCTCCGTCAGGACCGTTCCTCGGACAAGCGTCGGGGGTGATCGCTAGCGTGAGCGGACACACGGAGGGGAT CACCAAATGTTGGGCGCTAA
Product: DNA primase catalytic core
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1797; Mature: 1797
Protein sequence:
>1797_residues MIGGPFCARGNCPFARHRALEGVVMSLRKLTAGDGYSYLTRQVAAHDTTEKGHTSLADYYDEKGESPGRWMGSGLTGLGM NSGQGVTAQQMKALYGLGIHPDAANIEERLAEQGASRAEVEAAIALGKRFPIHDTASTFNVRVAEAFTAYNAQHRQKWNA PIRPEERARIRTQIGTAMFVEGHGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSALWALAPKEVAADIRAAH DAAVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKVQAEDGHWLALDGRLLYAAKV TASEHYNTRVEAELVARLGVEFADRDDTVGGKVPVREIRGVSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPPTAIEA KSLADQATLETRDAKHGRRSEREQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRA TWNVWHLLAEAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDGASVYDVHGATLYTSAKVLLA EEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQAAMARDLATSGAVVQLALAPAGTGKTTTMSVLADAWAAGGG QVIGLAPSAQAAHELGQAVSGYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGA VRLIGDDQQLAAVGAGGVLRDIQQQYGASTLSEVRRFDDPAEAAATLAVREGDAAALGFYADNARIHVGDLSAVADQAYD SWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATVGPEVDLADGNRGSVGDVIVTRRNSRRLVVSRSNWVKNGDR WRIEKVLGDGGLLARHLELGRTVELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQANHIY LDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSATTTQREASAYTTQFHDAVMRYHDALGYAAEDVLGADSLAS TNREVEAIWPGLTSEPAYPTLRGHLALRTVDGADPVATLLDAANERELGTSDDRAAVLDWRLGKAAAGPLPWLDGVPERL ADHATWGPYLRSRFERITTLAGAVRGEAEAWTPTATPPWASGLTAAEHSALRGDLSVWRAAFDVPEDHARATGPVQPGAS TAPHQQDLERRVRSVLGVHRADDELLELMPEEVRTDAEFGRLSERLGALQAAHVDVGPLMDRALNTVHPLPDERTADALW WRIVRHLGPAALRASANQAHTLRPSWTSHLSERLGEATCERVMADAMWPALVAAIHARPAEWTAEQLIDAATSGHGPDVR PEELCSALVWRIATMTDAPFAEPEPPEPDFSQPEPTPVAPIPAMNEPGAPAERIIELNHWALDHYSAMYPKSWAPDYLRD RLGNDLTDDPRYQVGYAPPGPTSLIQHLATRGTSEEELLDAGLARRTERGHLVDAFRDRLVFPIYSGSDLVGFIGRRNPT KPDGEFSGPKYLNTRSTAVFAKGEALFGLTEATADLDAGSTPVLVEGPMDAIAVTLASGGEYVGIAPLGTAFTETQAATL KPHLREAPSNIVIATDPDSAGWQSAQRAFWRLAALRAAPRHLTLPEGVDPADALRKHGKAALRTGLADSRDFALVLVDRV LDDRLATHDDAFARVDHCREAARTIGTLAPDRWLAYAQHASERLDLPLQAVIDEVLEAGAEWTDDPRACASRELARLGVS AAAPKATHRERVMEPPAATSEHCPIHLSRPPSPAVER
Sequences:
>Translated_1797_residues MIGGPFCARGNCPFARHRALEGVVMSLRKLTAGDGYSYLTRQVAAHDTTEKGHTSLADYYDEKGESPGRWMGSGLTGLGM NSGQGVTAQQMKALYGLGIHPDAANIEERLAEQGASRAEVEAAIALGKRFPIHDTASTFNVRVAEAFTAYNAQHRQKWNA PIRPEERARIRTQIGTAMFVEGHGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSALWALAPKEVAADIRAAH DAAVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKVQAEDGHWLALDGRLLYAAKV TASEHYNTRVEAELVARLGVEFADRDDTVGGKVPVREIRGVSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPPTAIEA KSLADQATLETRDAKHGRRSEREQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRA TWNVWHLLAEAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDGASVYDVHGATLYTSAKVLLA EEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQAAMARDLATSGAVVQLALAPAGTGKTTTMSVLADAWAAGGG QVIGLAPSAQAAHELGQAVSGYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGA VRLIGDDQQLAAVGAGGVLRDIQQQYGASTLSEVRRFDDPAEAAATLAVREGDAAALGFYADNARIHVGDLSAVADQAYD SWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATVGPEVDLADGNRGSVGDVIVTRRNSRRLVVSRSNWVKNGDR WRIEKVLGDGGLLARHLELGRTVELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQANHIY LDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSATTTQREASAYTTQFHDAVMRYHDALGYAAEDVLGADSLAS TNREVEAIWPGLTSEPAYPTLRGHLALRTVDGADPVATLLDAANERELGTSDDRAAVLDWRLGKAAAGPLPWLDGVPERL ADHATWGPYLRSRFERITTLAGAVRGEAEAWTPTATPPWASGLTAAEHSALRGDLSVWRAAFDVPEDHARATGPVQPGAS TAPHQQDLERRVRSVLGVHRADDELLELMPEEVRTDAEFGRLSERLGALQAAHVDVGPLMDRALNTVHPLPDERTADALW WRIVRHLGPAALRASANQAHTLRPSWTSHLSERLGEATCERVMADAMWPALVAAIHARPAEWTAEQLIDAATSGHGPDVR PEELCSALVWRIATMTDAPFAEPEPPEPDFSQPEPTPVAPIPAMNEPGAPAERIIELNHWALDHYSAMYPKSWAPDYLRD RLGNDLTDDPRYQVGYAPPGPTSLIQHLATRGTSEEELLDAGLARRTERGHLVDAFRDRLVFPIYSGSDLVGFIGRRNPT KPDGEFSGPKYLNTRSTAVFAKGEALFGLTEATADLDAGSTPVLVEGPMDAIAVTLASGGEYVGIAPLGTAFTETQAATL KPHLREAPSNIVIATDPDSAGWQSAQRAFWRLAALRAAPRHLTLPEGVDPADALRKHGKAALRTGLADSRDFALVLVDRV LDDRLATHDDAFARVDHCREAARTIGTLAPDRWLAYAQHASERLDLPLQAVIDEVLEAGAEWTDDPRACASRELARLGVS AAAPKATHRERVMEPPAATSEHCPIHLSRPPSPAVER >Mature_1797_residues MIGGPFCARGNCPFARHRALEGVVMSLRKLTAGDGYSYLTRQVAAHDTTEKGHTSLADYYDEKGESPGRWMGSGLTGLGM NSGQGVTAQQMKALYGLGIHPDAANIEERLAEQGASRAEVEAAIALGKRFPIHDTASTFNVRVAEAFTAYNAQHRQKWNA PIRPEERARIRTQIGTAMFVEGHGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSALWALAPKEVAADIRAAH DAAVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKVQAEDGHWLALDGRLLYAAKV TASEHYNTRVEAELVARLGVEFADRDDTVGGKVPVREIRGVSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPPTAIEA KSLADQATLETRDAKHGRRSEREQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRA TWNVWHLLAEAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDGASVYDVHGATLYTSAKVLLA EEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQAAMARDLATSGAVVQLALAPAGTGKTTTMSVLADAWAAGGG QVIGLAPSAQAAHELGQAVSGYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGA VRLIGDDQQLAAVGAGGVLRDIQQQYGASTLSEVRRFDDPAEAAATLAVREGDAAALGFYADNARIHVGDLSAVADQAYD SWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATVGPEVDLADGNRGSVGDVIVTRRNSRRLVVSRSNWVKNGDR WRIEKVLGDGGLLARHLELGRTVELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQANHIY LDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSATTTQREASAYTTQFHDAVMRYHDALGYAAEDVLGADSLAS TNREVEAIWPGLTSEPAYPTLRGHLALRTVDGADPVATLLDAANERELGTSDDRAAVLDWRLGKAAAGPLPWLDGVPERL ADHATWGPYLRSRFERITTLAGAVRGEAEAWTPTATPPWASGLTAAEHSALRGDLSVWRAAFDVPEDHARATGPVQPGAS TAPHQQDLERRVRSVLGVHRADDELLELMPEEVRTDAEFGRLSERLGALQAAHVDVGPLMDRALNTVHPLPDERTADALW WRIVRHLGPAALRASANQAHTLRPSWTSHLSERLGEATCERVMADAMWPALVAAIHARPAEWTAEQLIDAATSGHGPDVR PEELCSALVWRIATMTDAPFAEPEPPEPDFSQPEPTPVAPIPAMNEPGAPAERIIELNHWALDHYSAMYPKSWAPDYLRD RLGNDLTDDPRYQVGYAPPGPTSLIQHLATRGTSEEELLDAGLARRTERGHLVDAFRDRLVFPIYSGSDLVGFIGRRNPT KPDGEFSGPKYLNTRSTAVFAKGEALFGLTEATADLDAGSTPVLVEGPMDAIAVTLASGGEYVGIAPLGTAFTETQAATL KPHLREAPSNIVIATDPDSAGWQSAQRAFWRLAALRAAPRHLTLPEGVDPADALRKHGKAALRTGLADSRDFALVLVDRV LDDRLATHDDAFARVDHCREAARTIGTLAPDRWLAYAQHASERLDLPLQAVIDEVLEAGAEWTDDPRACASRELARLGVS AAAPKATHRERVMEPPAATSEHCPIHLSRPPSPAVER
Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Escherichia coli, GI1789447, Length=238, Percent_Identity=31.5126050420168, Blast_Score=104, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013264 - InterPro: IPR006295 - InterPro: IPR006171 - InterPro: IPR002694 [H]
Pfam domain/function: PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 193632; Mature: 193632
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGPFCARGNCPFARHRALEGVVMSLRKLTAGDGYSYLTRQVAAHDTTEKGHTSLADYY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHH DEKGESPGRWMGSGLTGLGMNSGQGVTAQQMKALYGLGIHPDAANIEERLAEQGASRAEV HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHH EAAIALGKRFPIHDTASTFNVRVAEAFTAYNAQHRQKWNAPIRPEERARIRTQIGTAMFV HHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHCCEEEE EGHGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSALWALAPKEVAADIRAAH ECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH DAAVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCEE QAEDGHWLALDGRLLYAAKVTASEHYNTRVEAELVARLGVEFADRDDTVGGKVPVREIRG ECCCCCEEEECCEEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC VSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPPTAIEAKSLADQATLETRDAKHGRRS CHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH EREQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC TWNVWHLLAEAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC ASVYDVHGATLYTSAKVLLAEEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQA CCEEEECCCEEEECCCCEEEHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHH AMARDLATSGAVVQLALAPAGTGKTTTMSVLADAWAAGGGQVIGLAPSAQAAHELGQAVS HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH GYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGA HHHHHHHHHHHEECCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCE VRLIGDDQQLAAVGAGGVLRDIQQQYGASTLSEVRRFDDPAEAAATLAVREGDAAALGFY EEEECCCCHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHEEEEECCCCEEEEEE ADNARIHVGDLSAVADQAYDSWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATV ECCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHHHEEEEEEC GPEVDLADGNRGSVGDVIVTRRNSRRLVVSRSNWVKNGDRWRIEKVLGDGGLLARHLELG CCCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEHHHHCCCCHHHHHHHCC RTVELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQANHIY CEEECCHHHHHHHHHCCEEEEECCCCCCCCCCHHEEECCHHHHHEEEEEECCCCCCCEEE LDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSATTTQREASAYTTQFHDAVMR EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH YHDALGYAAEDVLGADSLASTNREVEAIWPGLTSEPAYPTLRGHLALRTVDGADPVATLL HHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH DAANERELGTSDDRAAVLDWRLGKAAAGPLPWLDGVPERLADHATWGPYLRSRFERITTL HCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH AGAVRGEAEAWTPTATPPWASGLTAAEHSALRGDLSVWRAAFDVPEDHARATGPVQPGAS HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC TAPHQQDLERRVRSVLGVHRADDELLELMPEEVRTDAEFGRLSERLGALQAAHVDVGPLM CCCCHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH DRALNTVHPLPDERTADALWWRIVRHLGPAALRASANQAHTLRPSWTSHLSERLGEATCE HHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RVMADAMWPALVAAIHARPAEWTAEQLIDAATSGHGPDVRPEELCSALVWRIATMTDAPF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC AEPEPPEPDFSQPEPTPVAPIPAMNEPGAPAERIIELNHWALDHYSAMYPKSWAPDYLRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHCCCCCCCHHHHH RLGNDLTDDPRYQVGYAPPGPTSLIQHLATRGTSEEELLDAGLARRTERGHLVDAFRDRL HHCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCE VFPIYSGSDLVGFIGRRNPTKPDGEFSGPKYLNTRSTAVFAKGEALFGLTEATADLDAGS EEEEECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCEEEECCCEEEEHHHHHCCCCCCC TPVLVEGPMDAIAVTLASGGEYVGIAPLGTAFTETQAATLKPHLREAPSNIVIATDPDSA CCEEEECCCCEEEEEEECCCCEEEEECCCCHHHCCHHHHCCCHHHCCCCCEEEEECCCCC GWQSAQRAFWRLAALRAAPRHLTLPEGVDPADALRKHGKAALRTGLADSRDFALVLVDRV CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH LDDRLATHDDAFARVDHCREAARTIGTLAPDRWLAYAQHASERLDLPLQAVIDEVLEAGA HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC EWTDDPRACASRELARLGVSAAAPKATHRERVMEPPAATSEHCPIHLSRPPSPAVER CCCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MIGGPFCARGNCPFARHRALEGVVMSLRKLTAGDGYSYLTRQVAAHDTTEKGHTSLADYY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHH DEKGESPGRWMGSGLTGLGMNSGQGVTAQQMKALYGLGIHPDAANIEERLAEQGASRAEV HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHH EAAIALGKRFPIHDTASTFNVRVAEAFTAYNAQHRQKWNAPIRPEERARIRTQIGTAMFV HHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHCCEEEE EGHGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSALWALAPKEVAADIRAAH ECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH DAAVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCEE QAEDGHWLALDGRLLYAAKVTASEHYNTRVEAELVARLGVEFADRDDTVGGKVPVREIRG ECCCCCEEEECCEEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC VSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPPTAIEAKSLADQATLETRDAKHGRRS CHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH EREQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC TWNVWHLLAEAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC ASVYDVHGATLYTSAKVLLAEEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQA CCEEEECCCEEEECCCCEEEHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHH AMARDLATSGAVVQLALAPAGTGKTTTMSVLADAWAAGGGQVIGLAPSAQAAHELGQAVS HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH GYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGA HHHHHHHHHHHEECCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCE VRLIGDDQQLAAVGAGGVLRDIQQQYGASTLSEVRRFDDPAEAAATLAVREGDAAALGFY EEEECCCCHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHEEEEECCCCEEEEEE ADNARIHVGDLSAVADQAYDSWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATV ECCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHHHEEEEEEC GPEVDLADGNRGSVGDVIVTRRNSRRLVVSRSNWVKNGDRWRIEKVLGDGGLLARHLELG CCCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEHHHHCCCCHHHHHHHCC RTVELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQANHIY CEEECCHHHHHHHHHCCEEEEECCCCCCCCCCHHEEECCHHHHHEEEEEECCCCCCCEEE LDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSATTTQREASAYTTQFHDAVMR EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH YHDALGYAAEDVLGADSLASTNREVEAIWPGLTSEPAYPTLRGHLALRTVDGADPVATLL HHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH DAANERELGTSDDRAAVLDWRLGKAAAGPLPWLDGVPERLADHATWGPYLRSRFERITTL HCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH AGAVRGEAEAWTPTATPPWASGLTAAEHSALRGDLSVWRAAFDVPEDHARATGPVQPGAS HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC TAPHQQDLERRVRSVLGVHRADDELLELMPEEVRTDAEFGRLSERLGALQAAHVDVGPLM CCCCHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH DRALNTVHPLPDERTADALWWRIVRHLGPAALRASANQAHTLRPSWTSHLSERLGEATCE HHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RVMADAMWPALVAAIHARPAEWTAEQLIDAATSGHGPDVRPEELCSALVWRIATMTDAPF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC AEPEPPEPDFSQPEPTPVAPIPAMNEPGAPAERIIELNHWALDHYSAMYPKSWAPDYLRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHCCCCCCCHHHHH RLGNDLTDDPRYQVGYAPPGPTSLIQHLATRGTSEEELLDAGLARRTERGHLVDAFRDRL HHCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCE VFPIYSGSDLVGFIGRRNPTKPDGEFSGPKYLNTRSTAVFAKGEALFGLTEATADLDAGS EEEEECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCEEEECCCEEEEHHHHHCCCCCCC TPVLVEGPMDAIAVTLASGGEYVGIAPLGTAFTETQAATLKPHLREAPSNIVIATDPDSA CCEEEECCCCEEEEEEECCCCEEEEECCCCHHHCCHHHHCCCHHHCCCCCEEEEECCCCC GWQSAQRAFWRLAALRAAPRHLTLPEGVDPADALRKHGKAALRTGLADSRDFALVLVDRV CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH LDDRLATHDDAFARVDHCREAARTIGTLAPDRWLAYAQHASERLDLPLQAVIDEVLEAGA HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC EWTDDPRACASRELARLGVSAAAPKATHRERVMEPPAATSEHCPIHLSRPPSPAVER CCCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]