| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715801
Identifier: 119715801
GI number: 119715801
Start: 1660568
End: 1661371
Strand: Direct
Name: 119715801
Synonym: Noca_1565
Alternate gene names: NA
Gene position: 1660568-1661371 (Clockwise)
Preceding gene: 119715800
Following gene: 119715802
Centisome position: 33.31
GC content: 69.78
Gene sequence:
>804_bases ATGCCTTCGATCACGCAAGCGGGCATCACGCCCCGCGAACTCGACGACCTCGTCGACGGCGAGCGCTGGCGAGCGTGGTG CCGCGCCCGACCCGAACTCGAAGCCTTCGACTCGCTGGCCAATATCAGGCGCCTGAGGGGCGCGGCCGAGGACCAGGCGC TCGGCGCCCTCCTTTGGCTGGGAGCGGCCGAGGGAGGCGACGACCAGCTCGCGGCTGTCGCGGTGCTCCACCAACTCGGC GCCTCCATCCGGATCATCGCCAGGCACTTCTGGTACGCCGCCGACGGCGAGGCGGACGGCATCGTCGCGGGCGCCATGTG GGAGCAGATCCGTGCCTACGACTGGCGTGAGCGAACTGGGCGCCATGCGCAGGCGATCCACCACGCGACCAGGAAGTCGG TGCGCTCGGCGTTGCTTCGCGACCCCTCCCGGTGGCAGACGCGAGGGGTGATCCCGCTCAACCCCCAGTCGTGGCTCTTC GAAGCAGTGATGGAGCGACAGATCGGGGCGGAGCTCCAGGTGACCGACCTCGGGCCCCAGGATGAGCTGCAGGCGCTCCT CTGCTGGTCCCTACGGACCGGCGTCCTCGGTGACGACGAAGTCGCACTGCTCACGGAGCTTCTCGACGCCGACCGGGACA ACCCCCGCATCACGAAGTGGATGCGGGGAGCCTGCTCGACTTTGGCAGTGGAACGGGCGGCGTCGGCGCGCGGCGTCTGC GCCAAGTCCGTGACCCGGGCCCGTGATCGAGCCATCGCGAAACTCCGCGTGGCAGCCCCGAACTTCCTCGACGAGGTCGC GTGA
Upstream 100 bases:
>100_bases CGGTTTGTGAGCCATCCGGTGAGGCAGTTGGTGAGCGTGTCGGTGAGGACCGTCTTCTTCCGTGGAGTTCCGCCTGGATC CACGGAAAGGAACTCCGCCG
Downstream 100 bases:
>100_bases TGACTGTCCACTCCACCCCCGTTGGCGCGCTTGAAGGGGACATGAAGACCTGCCCTTCCCCAGAGACGCTCCCGATCGAG GCCGGCGACGTCGAATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPSITQAGITPRELDDLVDGERWRAWCRARPELEAFDSLANIRRLRGAAEDQALGALLWLGAAEGGDDQLAAVAVLHQLG ASIRIIARHFWYAADGEADGIVAGAMWEQIRAYDWRERTGRHAQAIHHATRKSVRSALLRDPSRWQTRGVIPLNPQSWLF EAVMERQIGAELQVTDLGPQDELQALLCWSLRTGVLGDDEVALLTELLDADRDNPRITKWMRGACSTLAVERAASARGVC AKSVTRARDRAIAKLRVAAPNFLDEVA
Sequences:
>Translated_267_residues MPSITQAGITPRELDDLVDGERWRAWCRARPELEAFDSLANIRRLRGAAEDQALGALLWLGAAEGGDDQLAAVAVLHQLG ASIRIIARHFWYAADGEADGIVAGAMWEQIRAYDWRERTGRHAQAIHHATRKSVRSALLRDPSRWQTRGVIPLNPQSWLF EAVMERQIGAELQVTDLGPQDELQALLCWSLRTGVLGDDEVALLTELLDADRDNPRITKWMRGACSTLAVERAASARGVC AKSVTRARDRAIAKLRVAAPNFLDEVA >Mature_266_residues PSITQAGITPRELDDLVDGERWRAWCRARPELEAFDSLANIRRLRGAAEDQALGALLWLGAAEGGDDQLAAVAVLHQLGA SIRIIARHFWYAADGEADGIVAGAMWEQIRAYDWRERTGRHAQAIHHATRKSVRSALLRDPSRWQTRGVIPLNPQSWLFE AVMERQIGAELQVTDLGPQDELQALLCWSLRTGVLGDDEVALLTELLDADRDNPRITKWMRGACSTLAVERAASARGVCA KSVTRARDRAIAKLRVAAPNFLDEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29545; Mature: 29414
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSITQAGITPRELDDLVDGERWRAWCRARPELEAFDSLANIRRLRGAAEDQALGALLWL CCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHE GAAEGGDDQLAAVAVLHQLGASIRIIARHFWYAADGEADGIVAGAMWEQIRAYDWRERTG ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCC RHAQAIHHATRKSVRSALLRDPSRWQTRGVIPLNPQSWLFEAVMERQIGAELQVTDLGPQ HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCHHHHHHHHHHHHHCCEEEEECCCCH DELQALLCWSLRTGVLGDDEVALLTELLDADRDNPRITKWMRGACSTLAVERAASARGVC HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH AKSVTRARDRAIAKLRVAAPNFLDEVA HHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure PSITQAGITPRELDDLVDGERWRAWCRARPELEAFDSLANIRRLRGAAEDQALGALLWL CCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHE GAAEGGDDQLAAVAVLHQLGASIRIIARHFWYAADGEADGIVAGAMWEQIRAYDWRERTG ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCC RHAQAIHHATRKSVRSALLRDPSRWQTRGVIPLNPQSWLFEAVMERQIGAELQVTDLGPQ HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCHHHHHHHHHHHHHCCEEEEECCCCH DELQALLCWSLRTGVLGDDEVALLTELLDADRDNPRITKWMRGACSTLAVERAASARGVC HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH AKSVTRARDRAIAKLRVAAPNFLDEVA HHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA