| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715793
Identifier: 119715793
GI number: 119715793
Start: 1650477
End: 1651451
Strand: Direct
Name: 119715793
Synonym: Noca_1557
Alternate gene names: NA
Gene position: 1650477-1651451 (Clockwise)
Preceding gene: 119715792
Following gene: 119715794
Centisome position: 33.1
GC content: 71.69
Gene sequence:
>975_bases GTGTCGACCTGGGGGGCGTTCAAGGACTCGCCGTACGAGGGCTATCACCCGTTGCGTCAGGTGCGCACCGTCGCGCTGGC CGCGGTCGCGGCGCTCGTGGTCGTGGCCAGTACGGCCACCCGCGCGGGCGGCGTTGCCGTGGTGATCCTGCCGGCCCTCG GGGTGGTCTACACCCTGGAGAGGCTGGCGACCGAGTGGTGGAAGTCGATCGTCCGATCCGACGACCAGGCCGCGTACACG ATCCCGATGCGCCTGGGTTTCCGCGGCCGTCCCATCGACGCGACGGTTGTGCGGTGGGCCGTGGGCCTGGCGGTCATCGC CGCGATGGTGGTGATCGGGTGGCTGGTGCACGCGGCCCAACAGCAGGCGGGCGAGGTGCCCGGATGGCTGGTCGGGCTGA CCGTCGGCGGGCTGGGTGGCTGGCTGACCGCGATCGGTGGCGCCTGGAAGGACGCCCCGATCGAGGGGTTCAGCGGTTGG AAGTTCCTGCGTAGCCCCCTGGTCGCGACCGCGTGGGCGGTACCGCTGTCGCTGCTCACCCAGGACTGGGTGACGCTGGT GCTGTCCGCTGGCGGGATGGCGGTCGCCTCCATCGAGACCTACAAGACCTTCCTCACCGGTGGTCGCCCGCCTGGCAAGT TCGACGGGAAGCCGGTCCGGTGGGTGCCCACGCTGCTCATGCGCCGGATCGGCCGTGCACACGCGGGCGGCTGGGCCATC TTCGGTGCGATCGCCCTGCTGCAGGCTGCGCAGCTGCTGCGGGGGCCGCACACCCTCAACGACGGGCATGAGGACCCGTC CCGCCTGCTACCCGCCCTCGTCGCCGGAGGTGTCGCCGTCGTGTGCGTGTGCGCCGTTGCGGTCGTCCTGCGCGCCTCCG CCCTGTTCGCGAGTGCGCAGGACCAGGTCGCAGAGGCTAGCGAGCGCGCCGCGACCACGTGCGGCGTGGGTGAACCGGTC GATGTCGCCATCTAG
Upstream 100 bases:
>100_bases CTGTCGGTGAACCGCAGCGCACGAGGAGTGCTCGTTGATCCCGTTCTCCACCCCGTCACTCTTGCTTGCCGCAACTCTCG CGGCTGCCGTCGGGTTGCAT
Downstream 100 bases:
>100_bases ACGTCCACGCCTCGACGGGTCGCCCCCGAGGTGCCACACCGGGGCTCGGTAGAGGTTCCTGCGGCTGTCACACGGGGCGG GGCGTGGCGATGCCTGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSTWGAFKDSPYEGYHPLRQVRTVALAAVAALVVVASTATRAGGVAVVILPALGVVYTLERLATEWWKSIVRSDDQAAYT IPMRLGFRGRPIDATVVRWAVGLAVIAAMVVIGWLVHAAQQQAGEVPGWLVGLTVGGLGGWLTAIGGAWKDAPIEGFSGW KFLRSPLVATAWAVPLSLLTQDWVTLVLSAGGMAVASIETYKTFLTGGRPPGKFDGKPVRWVPTLLMRRIGRAHAGGWAI FGAIALLQAAQLLRGPHTLNDGHEDPSRLLPALVAGGVAVVCVCAVAVVLRASALFASAQDQVAEASERAATTCGVGEPV DVAI
Sequences:
>Translated_324_residues MSTWGAFKDSPYEGYHPLRQVRTVALAAVAALVVVASTATRAGGVAVVILPALGVVYTLERLATEWWKSIVRSDDQAAYT IPMRLGFRGRPIDATVVRWAVGLAVIAAMVVIGWLVHAAQQQAGEVPGWLVGLTVGGLGGWLTAIGGAWKDAPIEGFSGW KFLRSPLVATAWAVPLSLLTQDWVTLVLSAGGMAVASIETYKTFLTGGRPPGKFDGKPVRWVPTLLMRRIGRAHAGGWAI FGAIALLQAAQLLRGPHTLNDGHEDPSRLLPALVAGGVAVVCVCAVAVVLRASALFASAQDQVAEASERAATTCGVGEPV DVAI >Mature_323_residues STWGAFKDSPYEGYHPLRQVRTVALAAVAALVVVASTATRAGGVAVVILPALGVVYTLERLATEWWKSIVRSDDQAAYTI PMRLGFRGRPIDATVVRWAVGLAVIAAMVVIGWLVHAAQQQAGEVPGWLVGLTVGGLGGWLTAIGGAWKDAPIEGFSGWK FLRSPLVATAWAVPLSLLTQDWVTLVLSAGGMAVASIETYKTFLTGGRPPGKFDGKPVRWVPTLLMRRIGRAHAGGWAIF GAIALLQAAQLLRGPHTLNDGHEDPSRLLPALVAGGVAVVCVCAVAVVLRASALFASAQDQVAEASERAATTCGVGEPVD VAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33926; Mature: 33795
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTWGAFKDSPYEGYHPLRQVRTVALAAVAALVVVASTATRAGGVAVVILPALGVVYTLE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH RLATEWWKSIVRSDDQAAYTIPMRLGFRGRPIDATVVRWAVGLAVIAAMVVIGWLVHAAQ HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQAGEVPGWLVGLTVGGLGGWLTAIGGAWKDAPIEGFSGWKFLRSPLVATAWAVPLSLLT HHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QDWVTLVLSAGGMAVASIETYKTFLTGGRPPGKFDGKPVRWVPTLLMRRIGRAHAGGWAI HHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH FGAIALLQAAQLLRGPHTLNDGHEDPSRLLPALVAGGVAVVCVCAVAVVLRASALFASAQ HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQVAEASERAATTCGVGEPVDVAI HHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STWGAFKDSPYEGYHPLRQVRTVALAAVAALVVVASTATRAGGVAVVILPALGVVYTLE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH RLATEWWKSIVRSDDQAAYTIPMRLGFRGRPIDATVVRWAVGLAVIAAMVVIGWLVHAAQ HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQAGEVPGWLVGLTVGGLGGWLTAIGGAWKDAPIEGFSGWKFLRSPLVATAWAVPLSLLT HHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QDWVTLVLSAGGMAVASIETYKTFLTGGRPPGKFDGKPVRWVPTLLMRRIGRAHAGGWAI HHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH FGAIALLQAAQLLRGPHTLNDGHEDPSRLLPALVAGGVAVVCVCAVAVVLRASALFASAQ HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQVAEASERAATTCGVGEPVDVAI HHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA