| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715763
Identifier: 119715763
GI number: 119715763
Start: 1620363
End: 1620614
Strand: Direct
Name: 119715763
Synonym: Noca_1527
Alternate gene names: NA
Gene position: 1620363-1620614 (Clockwise)
Preceding gene: 119715762
Following gene: 119715764
Centisome position: 32.5
GC content: 77.78
Gene sequence:
>252_bases GTGAGCGTGGAGATCCTGCTCTGGCTGGTGCCCTCGGTCCTCGTCACGGTCGTGGCGATGCTCTGGGTCGCCTGGCTCGG CCGCGAGGGTCGCGGCGAGGTCGACCGGGAGGTCGCCGTACGCCGGCTGGCCGCGGCGCTGGAGCCCGATCCGCGCCGAC GGCGCCGGCCCACGCCCGGGTACGCCGCGCCACCGCCGGCGGTCGACCGCTCCACCGGCATCGCCGTACGCCCCTCCCGC CGCGTGGGCTAG
Upstream 100 bases:
>100_bases TCGTCGCCGCGTGGGCCGCGGGTCGCTCTCGGGTCGGCCGCCACGCGGTGTGGTGACGGTCGGCGCGTCGGCTGCGGGCC ACCGGCTGCGCGCCTAGCCT
Downstream 100 bases:
>100_bases GCGGTATCTGACAGGCTTGCGCCATGACGCAGCGCACCCTGGCCGGGCTCCTCGCCGTGCCGCTGCTGATCGGGCTGTGG GTGACGGCTGCGCTCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSVEILLWLVPSVLVTVVAMLWVAWLGREGRGEVDREVAVRRLAAALEPDPRRRRRPTPGYAAPPPAVDRSTGIAVRPSR RVG
Sequences:
>Translated_83_residues MSVEILLWLVPSVLVTVVAMLWVAWLGREGRGEVDREVAVRRLAAALEPDPRRRRRPTPGYAAPPPAVDRSTGIAVRPSR RVG >Mature_82_residues SVEILLWLVPSVLVTVVAMLWVAWLGREGRGEVDREVAVRRLAAALEPDPRRRRRPTPGYAAPPPAVDRSTGIAVRPSRR VG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9179; Mature: 9048
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEILLWLVPSVLVTVVAMLWVAWLGREGRGEVDREVAVRRLAAALEPDPRRRRRPTPG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC YAAPPPAVDRSTGIAVRPSRRVG CCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure SVEILLWLVPSVLVTVVAMLWVAWLGREGRGEVDREVAVRRLAAALEPDPRRRRRPTPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC YAAPPPAVDRSTGIAVRPSRRVG CCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA