| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715760
Identifier: 119715760
GI number: 119715760
Start: 1617852
End: 1618418
Strand: Reverse
Name: 119715760
Synonym: Noca_1524
Alternate gene names: NA
Gene position: 1618418-1617852 (Counterclockwise)
Preceding gene: 119715761
Following gene: 119715756
Centisome position: 32.46
GC content: 77.25
Gene sequence:
>567_bases GTGACGCTCCCCCTCGACCTGCACGCCGACGCGCTGGCGGTGCTGACCGGCTGGCGGGCCCCCGGGCACGCCCAGGAGGC GCTCCGCCAGCGGTACGTCGAGCACCTGCTCGCCCATGCCGACGGGCTGGACCGGGCCTGCCGGCCCGACCACCTCACCG CGAGCACGCTGGTGCTGGCCGCGGACCACAGCACCGCCCTGCTCACCCTGCACGCCAAGGCGCACGCCTGGTTCCAGCTC GGCGGGCACTGCGAGCCCGGCGACGCCACGCTGGCCGGGGCCGCGCTGCGGGAGGCGGCCGAGGAGTCCGGGCTGGCCGG GCTGCGGCTCGACCCGGTGCCGGTGCAGCTCAGCGAGCACGCCGTACCCTTCTGCGGCTCCAACGGGCCGGGCCGGCCGG TGCACCACCTCGACGTGCGGTTCGTCGCGGTCGCTCCCCCGGACGCCGTGCACGCGATCAGCGAGGAGTCGCTCGACCTG CGCTGGTGGCCCCTCGACGCGCTGCCCGACCCGGAGGCCGACCTGGTGGAGCTGGTCGAGCTGGCGCGGGCCCGGGTAGC GCCCTAG
Upstream 100 bases:
>100_bases ACGACCCGCTCGGCTTCCGCGAGGACGCCACGGCGCTGCCCGAGCTCAGCGACGAGGACTTCGACGCCGAGCTGAAGAAG CTGCTCGACTCTCCCGACGA
Downstream 100 bases:
>100_bases TCGATCTCCTCGCCGGGCGGCGGATCGAGCCGGGCGGCGGTCGACCAGCCGACCAGGTAGCCCTTGGCGCGCTCGGCGCG CGGATAGCGGTCCACCCAGG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Family Hydrolase; Hydrolase Nudix Family Protein; NUDIX Family Protein; ADP-Ribose Pyrophosphatase; NTP Pyrophosphohydrolase; Nudix Superfamily Hydrolase
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTLPLDLHADALAVLTGWRAPGHAQEALRQRYVEHLLAHADGLDRACRPDHLTASTLVLAADHSTALLTLHAKAHAWFQL GGHCEPGDATLAGAALREAAEESGLAGLRLDPVPVQLSEHAVPFCGSNGPGRPVHHLDVRFVAVAPPDAVHAISEESLDL RWWPLDALPDPEADLVELVELARARVAP
Sequences:
>Translated_188_residues MTLPLDLHADALAVLTGWRAPGHAQEALRQRYVEHLLAHADGLDRACRPDHLTASTLVLAADHSTALLTLHAKAHAWFQL GGHCEPGDATLAGAALREAAEESGLAGLRLDPVPVQLSEHAVPFCGSNGPGRPVHHLDVRFVAVAPPDAVHAISEESLDL RWWPLDALPDPEADLVELVELARARVAP >Mature_187_residues TLPLDLHADALAVLTGWRAPGHAQEALRQRYVEHLLAHADGLDRACRPDHLTASTLVLAADHSTALLTLHAKAHAWFQLG GHCEPGDATLAGAALREAAEESGLAGLRLDPVPVQLSEHAVPFCGSNGPGRPVHHLDVRFVAVAPPDAVHAISEESLDLR WWPLDALPDPEADLVELVELARARVAP
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20081; Mature: 19950
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLDLHADALAVLTGWRAPGHAQEALRQRYVEHLLAHADGLDRACRPDHLTASTLVLA CCCCCCCCCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE ADHSTALLTLHAKAHAWFQLGGHCEPGDATLAGAALREAAEESGLAGLRLDPVPVQLSEH ECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC AVPFCGSNGPGRPVHHLDVRFVAVAPPDAVHAISEESLDLRWWPLDALPDPEADLVELVE CCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH LARARVAP HHHHHCCC >Mature Secondary Structure TLPLDLHADALAVLTGWRAPGHAQEALRQRYVEHLLAHADGLDRACRPDHLTASTLVLA CCCCCCCCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE ADHSTALLTLHAKAHAWFQLGGHCEPGDATLAGAALREAAEESGLAGLRLDPVPVQLSEH ECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC AVPFCGSNGPGRPVHHLDVRFVAVAPPDAVHAISEESLDLRWWPLDALPDPEADLVELVE CCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH LARARVAP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA