| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715751
Identifier: 119715751
GI number: 119715751
Start: 1609728
End: 1609976
Strand: Reverse
Name: 119715751
Synonym: Noca_1515
Alternate gene names: NA
Gene position: 1609976-1609728 (Counterclockwise)
Preceding gene: 119715754
Following gene: 119715749
Centisome position: 32.29
GC content: 65.46
Gene sequence:
>249_bases ATGAGCTCCTTCACGATGTACACGACCCCGTGGTGCGGCTACTGCCACCGGCTCAAGAGCCAGCTCGACCGTGAGGACAT CGCCTACGAGATCGTCGACATCGAGCAGAGCCCCGAGGCGGCCAAGATCGTCGAGTCCGCCAACAACGGCAACCAGACCG TCCCCACCCTCGTCTACCCCGACGGCACCGCCCAGACCAACCCGTCCGTGGCCCAGGTCAAGGAGAAGCTCGCCGCGCTC TCCGTGTGA
Upstream 100 bases:
>100_bases AGCAGGTCGGCGGGCGTGGCCATTCGGGGGAACATCTCCTAGGGACGGGGCGTTGGACCGGGTGCAGTCAAACCCTAGAC GCCGGAGGCGACAGTCCCAG
Downstream 100 bases:
>100_bases TCGACCCGCCGGCGGCGGGTTGGGGTCTTCGGCGTCCGCGCCGACCGTAACCACGTCGTCGGACGACCGACCACGAGTCC GATCCCGCGAGACGCGGCTA
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSSFTMYTTPWCGYCHRLKSQLDREDIAYEIVDIEQSPEAAKIVESANNGNQTVPTLVYPDGTAQTNPSVAQVKEKLAAL SV
Sequences:
>Translated_82_residues MSSFTMYTTPWCGYCHRLKSQLDREDIAYEIVDIEQSPEAAKIVESANNGNQTVPTLVYPDGTAQTNPSVAQVKEKLAAL SV >Mature_81_residues SSFTMYTTPWCGYCHRLKSQLDREDIAYEIVDIEQSPEAAKIVESANNGNQTVPTLVYPDGTAQTNPSVAQVKEKLAALS V
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011915 - InterPro: IPR002109 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9022; Mature: 8891
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFTMYTTPWCGYCHRLKSQLDREDIAYEIVDIEQSPEAAKIVESANNGNQTVPTLVYP CCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEEECCCCCCHHHHHHCCCCCCCCCCEEECC DGTAQTNPSVAQVKEKLAALSV CCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SSFTMYTTPWCGYCHRLKSQLDREDIAYEIVDIEQSPEAAKIVESANNGNQTVPTLVYP CCCCCCCCCHHHHHHHHHHHCCHHHHEEEEEECCCCCCHHHHHHCCCCCCCCCCEEECC DGTAQTNPSVAQVKEKLAALSV CCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]