| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is cpkA [H]
Identifier: 119715740
GI number: 119715740
Start: 1594728
End: 1595699
Strand: Direct
Name: cpkA [H]
Synonym: Noca_1504
Alternate gene names: 119715740
Gene position: 1594728-1595699 (Clockwise)
Preceding gene: 119715739
Following gene: 119715741
Centisome position: 31.98
GC content: 74.38
Gene sequence:
>972_bases GTGCCCGACGCCGACCGGGTCACTAGGTTCGACGCCATGAGGGTCCTGCTCGCACTCGGTGGCAACGCCATGACGAACGC CGACGGCCGGGCCCGTCCCGAGGACCAGATCGCGGCCGCGAGGGTCGCCATGGACGCGGTCGCCGACCTGCTCGGGGCCG ACGTCGAGGTCGTCATCACCCACGGCAACGGGCCCCAGGTCGGCAACCTGCTGGTCAAGAACGAGCTCGCCGCGGGCGTG GTCCCGCCGGTCCCGCTGGACTGGTGTGGTGCGCAGACCCAGGCGACGCTCGGGTTCGTGCTCATGAACGCGCTGGAGGC CGCGCTCGCGGAGCGAGGGGTCGAGCGGCGTACGGCGACGCTGGTGACCCGCGCGCTCGTCGACGCGGACGACGCCGGCT TCACGAACCCGACCAAGCCGATCGGCCGGTTCCTGCCCGCCGACGAGGCCGCCGTGCTCATCGAGCACGGCGAGACCTGG GAGGACCGCGGCGCGAAGGGCTGGCGGCGCGTGGTCGCCTCGCCCGAGCCGATCGAGATCCTCGACGCTCCGGCGGTCGC GGCGCTGGTCGCGGCCGGGTTCGTCGTGGTCGCCAACGGCGGCGGCGGCATCCCCACGGTGCGGGAGCCCGACGGCACGC TGCGCGGCGTCGAGGCCGTGATCGACAAGGACCTGGGCGCGGCCCTGCTCGCCGGCACCGTGGCCGCGGACGTGCTGGTG ATCGGCACCGACGTACCCAACGCGGTGCTGCGGTACGGCGCCCCCGACGCCGAGCCGCTCGGCAGGGTGACCGTGTCCGA GCTGCGGGCCCACGCCGCCGCGGGGCACTTCGCCAGCGGCTCGATGGGGCCGAAGGTGGACGCCGCCTGCCGGTTCGTCG AGGCCGGCGGCTCCCGGGCCGTGATCACCGACCTGACCCACATCACCCAGGCCATCACCGGCGACGCGGGAACCGTCGTC GTACCCAACTAG
Upstream 100 bases:
>100_bases GCCCGGTCCGACGTGTGGATGCGGTCCTGCGCGCTGATGTGAGCCCGGTCGGCTGGCAACTGTTGCCAGCGATCGGGGCC GGTCCTCGTCGCCGCCCACG
Downstream 100 bases:
>100_bases TGCCGGACCAACCCAGGAGGACACACCACATGCCCGACGCCATCGAGGTACGCAAGGTCCCGATCCACTCCGTCGCCGAT GCGAGCGAGCTCGCGAAGCT
Product: carbamate kinase
Products: NA
Alternate protein names: Carbamate kinase-like carbamoylphosphate synthase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPDADRVTRFDAMRVLLALGGNAMTNADGRARPEDQIAAARVAMDAVADLLGADVEVVITHGNGPQVGNLLVKNELAAGV VPPVPLDWCGAQTQATLGFVLMNALEAALAERGVERRTATLVTRALVDADDAGFTNPTKPIGRFLPADEAAVLIEHGETW EDRGAKGWRRVVASPEPIEILDAPAVAALVAAGFVVVANGGGGIPTVREPDGTLRGVEAVIDKDLGAALLAGTVAADVLV IGTDVPNAVLRYGAPDAEPLGRVTVSELRAHAAAGHFASGSMGPKVDAACRFVEAGGSRAVITDLTHITQAITGDAGTVV VPN
Sequences:
>Translated_323_residues MPDADRVTRFDAMRVLLALGGNAMTNADGRARPEDQIAAARVAMDAVADLLGADVEVVITHGNGPQVGNLLVKNELAAGV VPPVPLDWCGAQTQATLGFVLMNALEAALAERGVERRTATLVTRALVDADDAGFTNPTKPIGRFLPADEAAVLIEHGETW EDRGAKGWRRVVASPEPIEILDAPAVAALVAAGFVVVANGGGGIPTVREPDGTLRGVEAVIDKDLGAALLAGTVAADVLV IGTDVPNAVLRYGAPDAEPLGRVTVSELRAHAAAGHFASGSMGPKVDAACRFVEAGGSRAVITDLTHITQAITGDAGTVV VPN >Mature_322_residues PDADRVTRFDAMRVLLALGGNAMTNADGRARPEDQIAAARVAMDAVADLLGADVEVVITHGNGPQVGNLLVKNELAAGVV PPVPLDWCGAQTQATLGFVLMNALEAALAERGVERRTATLVTRALVDADDAGFTNPTKPIGRFLPADEAAVLIEHGETWE DRGAKGWRRVVASPEPIEILDAPAVAALVAAGFVVVANGGGGIPTVREPDGTLRGVEAVIDKDLGAALLAGTVAADVLVI GTDVPNAVLRYGAPDAEPLGRVTVSELRAHAAAGHFASGSMGPKVDAACRFVEAGGSRAVITDLTHITQAITGDAGTVVV PN
Specific function: Unknown
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789238, Length=313, Percent_Identity=42.8115015974441, Blast_Score=223, Evalue=9e-60, Organism=Escherichia coli, GI1786516, Length=312, Percent_Identity=41.9871794871795, Blast_Score=207, Evalue=9e-55, Organism=Escherichia coli, GI1786732, Length=308, Percent_Identity=39.6103896103896, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 33053; Mature: 32922
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDADRVTRFDAMRVLLALGGNAMTNADGRARPEDQIAAARVAMDAVADLLGADVEVVIT CCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE HGNGPQVGNLLVKNELAAGVVPPVPLDWCGAQTQATLGFVLMNALEAALAERGVERRTAT CCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH LVTRALVDADDAGFTNPTKPIGRFLPADEAAVLIEHGETWEDRGAKGWRRVVASPEPIEI HHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCHHHCCCHHHHHHCCCCCCCEE LDAPAVAALVAAGFVVVANGGGGIPTVREPDGTLRGVEAVIDKDLGAALLAGTVAADVLV ECCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCEEE IGTDVPNAVLRYGAPDAEPLGRVTVSELRAHAAAGHFASGSMGPKVDAACRFVEAGGSRA EECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEE VITDLTHITQAITGDAGTVVVPN EHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure PDADRVTRFDAMRVLLALGGNAMTNADGRARPEDQIAAARVAMDAVADLLGADVEVVIT CCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE HGNGPQVGNLLVKNELAAGVVPPVPLDWCGAQTQATLGFVLMNALEAALAERGVERRTAT CCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH LVTRALVDADDAGFTNPTKPIGRFLPADEAAVLIEHGETWEDRGAKGWRRVVASPEPIEI HHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCHHHCCCHHHHHHCCCCCCCEE LDAPAVAALVAAGFVVVANGGGGIPTVREPDGTLRGVEAVIDKDLGAALLAGTVAADVLV ECCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCEEE IGTDVPNAVLRYGAPDAEPLGRVTVSELRAHAAAGHFASGSMGPKVDAACRFVEAGGSRA EECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEE VITDLTHITQAITGDAGTVVVPN EHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA