Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is ybaZ [C]

Identifier: 119715717

GI number: 119715717

Start: 1567376

End: 1567717

Strand: Direct

Name: ybaZ [C]

Synonym: Noca_1481

Alternate gene names: 119715717

Gene position: 1567376-1567717 (Clockwise)

Preceding gene: 119715716

Following gene: 119715718

Centisome position: 31.44

GC content: 76.9

Gene sequence:

>342_bases
GTGAGGATCGACCCGGAGGAGTACGCCGAGCGGGTGCTGCAGTGCGTCGAGTCGGTGCCCCGGGGGCGGGTGACGACGTA
CGGCGCGATCGCGGAGGTCGTCGGCGAGCTGCTCGGCGGCGGCGGGCCGCGCCAGGTCGGCTCGGTGATGTCCGCCCACG
GCGGTGCGGTCGCGTGGTGGCGGGTCGTCCACGCCGACGGGTCGCCACCGACCTGCCACGACGGCGAGGCACCCCAGGCC
TACCTCGAGGAGAGCACGCCGCTGCGGCCGTCGGGCCGGATCGACCTGGCCCGCGCCTTCTGGCGGCCCCGCCTGGAGGC
CGAGCCCCGACCCCGAGCCTGA

Upstream 100 bases:

>100_bases
ACCAGCCGGAGCAGCCCGGCGTCTGGGTGCTCGGCGTCGCGGCCGCGTGCCTGGCCACCGTCGTCGCGACCGCCGCGTTG
GGGACCCGTGAGGAGGACCG

Downstream 100 bases:

>100_bases
ACCCGCAGCCCCCGGTGGCGCCGCTCCTGACGCTTCCGCGGGGGCAGCGCTCCAGCAGGAGAGCCCAAAGTCGGTGGCCG
CTGTCGGCGGTCCCCGGCAG

Product: methylated-DNA-(protein)-cysteine S-methyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRIDPEEYAERVLQCVESVPRGRVTTYGAIAEVVGELLGGGGPRQVGSVMSAHGGAVAWWRVVHADGSPPTCHDGEAPQA
YLEESTPLRPSGRIDLARAFWRPRLEAEPRPRA

Sequences:

>Translated_113_residues
MRIDPEEYAERVLQCVESVPRGRVTTYGAIAEVVGELLGGGGPRQVGSVMSAHGGAVAWWRVVHADGSPPTCHDGEAPQA
YLEESTPLRPSGRIDLARAFWRPRLEAEPRPRA
>Mature_113_residues
MRIDPEEYAERVLQCVESVPRGRVTTYGAIAEVVGELLGGGGPRQVGSVMSAHGGAVAWWRVVHADGSPPTCHDGEAPQA
YLEESTPLRPSGRIDLARAFWRPRLEAEPRPRA

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12272; Mature: 12272

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDPEEYAERVLQCVESVPRGRVTTYGAIAEVVGELLGGGGPRQVGSVMSAHGGAVAWW
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEH
RVVHADGSPPTCHDGEAPQAYLEESTPLRPSGRIDLARAFWRPRLEAEPRPRA
EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRIDPEEYAERVLQCVESVPRGRVTTYGAIAEVVGELLGGGGPRQVGSVMSAHGGAVAWW
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEH
RVVHADGSPPTCHDGEAPQAYLEESTPLRPSGRIDLARAFWRPRLEAEPRPRA
EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA