| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715682
Identifier: 119715682
GI number: 119715682
Start: 1532810
End: 1533352
Strand: Reverse
Name: 119715682
Synonym: Noca_1446
Alternate gene names: NA
Gene position: 1533352-1532810 (Counterclockwise)
Preceding gene: 119715683
Following gene: 119715681
Centisome position: 30.75
GC content: 70.9
Gene sequence:
>543_bases GTGGCTGAGAGCCGCACGCCGCGGGCCCGCCTGGACACGCCCAAGGAGGCGCGCCGGCCGCTGGTGCGGCGCCCGTCGTA CGACGCCGACGCGTTCGGGATCTTCGCCGAGCAGTTCGCTCGGTTCATGGGGACCGCGAAGTTCCTCATCTACATGACGC TCTTCGTGGCCGTCTGGGTCCTGTGGAACCTGATCATCCCCGGGGGCTCGCGCTTCGACGAATACCCCTTCATCTTCCTC ACCCTGATGCTCAGCCTGCAGGCGTCGTACGCCGCCCCGCTGATCCTGCTCGCCCAGAACCGGCAGGAGCAGCGCGACAA GGTGGTCGCCGAGCAGGACCGCCAGGCGAACGCCCGGGCGCACGCGGACATGGAGTTCCTCGCCCGCGAGGTGGCCTCGC TGCGGATGGCCGTGGGCGAGGTCGCCACCCGCGACTTCCTGCGCTCGGAGCTGCGCGCGCTGCTCAGCGAGCTGGACGAC CGGGCGCAGGAGGGTGGCCAGCGTCACCTGGGCGGCGACGAGAGCGACGCTGCCACCACCTAG
Upstream 100 bases:
>100_bases CTCGGCGCGGTGAGCGTCGACGACCTGCTCGACCACATGCTCCCGGAGAACTGGCGCGACCAGGCGATCCGCTCGTCCGA CCGCTCTCAGGGGGTCCGCC
Downstream 100 bases:
>100_bases ACTCGGACAACGTGAGCACCCCGTCCCTCGAGCAGGTCAACGCCGCACTGGCGACCGTCAACGATCCGGAGATCAAGCGC CCGATCACCGAGCTCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAESRTPRARLDTPKEARRPLVRRPSYDADAFGIFAEQFARFMGTAKFLIYMTLFVAVWVLWNLIIPGGSRFDEYPFIFL TLMLSLQASYAAPLILLAQNRQEQRDKVVAEQDRQANARAHADMEFLAREVASLRMAVGEVATRDFLRSELRALLSELDD RAQEGGQRHLGGDESDAATT
Sequences:
>Translated_180_residues MAESRTPRARLDTPKEARRPLVRRPSYDADAFGIFAEQFARFMGTAKFLIYMTLFVAVWVLWNLIIPGGSRFDEYPFIFL TLMLSLQASYAAPLILLAQNRQEQRDKVVAEQDRQANARAHADMEFLAREVASLRMAVGEVATRDFLRSELRALLSELDD RAQEGGQRHLGGDESDAATT >Mature_179_residues AESRTPRARLDTPKEARRPLVRRPSYDADAFGIFAEQFARFMGTAKFLIYMTLFVAVWVLWNLIIPGGSRFDEYPFIFLT LMLSLQASYAAPLILLAQNRQEQRDKVVAEQDRQANARAHADMEFLAREVASLRMAVGEVATRDFLRSELRALLSELDDR AQEGGQRHLGGDESDAATT
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20368; Mature: 20237
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESRTPRARLDTPKEARRPLVRRPSYDADAFGIFAEQFARFMGTAKFLIYMTLFVAVWV CCCCCCCCCCCCCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWNLIIPGGSRFDEYPFIFLTLMLSLQASYAAPLILLAQNRQEQRDKVVAEQDRQANARA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HADMEFLAREVASLRMAVGEVATRDFLRSELRALLSELDDRAQEGGQRHLGGDESDAATT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AESRTPRARLDTPKEARRPLVRRPSYDADAFGIFAEQFARFMGTAKFLIYMTLFVAVWV CCCCCCCCCCCCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWNLIIPGGSRFDEYPFIFLTLMLSLQASYAAPLILLAQNRQEQRDKVVAEQDRQANARA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HADMEFLAREVASLRMAVGEVATRDFLRSELRALLSELDDRAQEGGQRHLGGDESDAATT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA