| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715677
Identifier: 119715677
GI number: 119715677
Start: 1529302
End: 1529820
Strand: Reverse
Name: 119715677
Synonym: Noca_1441
Alternate gene names: NA
Gene position: 1529820-1529302 (Counterclockwise)
Preceding gene: 119715678
Following gene: 119715659
Centisome position: 30.68
GC content: 74.37
Gene sequence:
>519_bases ATGAACAACCCGGAGACCGACCAGACCGTCGTCGTGCTGCGCGCGGCGGCCGTGCCGCTCGCCAGTGTGCAGGGCACGCT CGCCCTCGACCTGCAGCCCCGCTTCGACCCGCCGGACCCGATCGTCCCCCACGGCCACGCCGCGGCCGACGTGATCGCGA TCGAGCAGCCGCTGCGTCGCGGGTTGGAGCAGTGGGCCCGCCGGTACACGCAGGCGGCGGTCGAGATCGTCGGCGGCGAC CGACCGGTCTCCCAGCTGCTGCGCTGGAGCTCACGCGAGGTCTACGAGAACCTCGACCGTCGCGCTCAGCTGGTCGCCCG CGCCGGGCGGCACCAGCCCGGCCAGGGCCGGGTCCAGCCGGTCCGGCCCAGGGTGCTGGGGGTGCACACCTGCTTCCTGT CCCGCGACGCCGTCGAGGTCAGCGCGCACGTGCGGTACGGCGAGCGCTCCCGCGCGCTCGCCGCCCGCTTCGAGATCACC GGCCAACGCTGGTGCTGCACCGCGCTGGAGTTTGCCTAG
Upstream 100 bases:
>100_bases AGATCTACGCCCTCAACCGCGACCAGATCGGCCCCGACCCGGGCCTGATCCAGCCCGCGACCCGACTTCGGCTTCCCGCC GACCGACCGGAGGAGACCTC
Downstream 100 bases:
>100_bases GGTCTGGCTCCCACTCCCTGGACGACGCTCGCGACGGCCGAGAAGTGAGAGCCGGACCCTAGCTGACGCGAGCGGTCAGT CCCGTCGGCCCGCCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNNPETDQTVVVLRAAAVPLASVQGTLALDLQPRFDPPDPIVPHGHAAADVIAIEQPLRRGLEQWARRYTQAAVEIVGGD RPVSQLLRWSSREVYENLDRRAQLVARAGRHQPGQGRVQPVRPRVLGVHTCFLSRDAVEVSAHVRYGERSRALAARFEIT GQRWCCTALEFA
Sequences:
>Translated_172_residues MNNPETDQTVVVLRAAAVPLASVQGTLALDLQPRFDPPDPIVPHGHAAADVIAIEQPLRRGLEQWARRYTQAAVEIVGGD RPVSQLLRWSSREVYENLDRRAQLVARAGRHQPGQGRVQPVRPRVLGVHTCFLSRDAVEVSAHVRYGERSRALAARFEIT GQRWCCTALEFA >Mature_172_residues MNNPETDQTVVVLRAAAVPLASVQGTLALDLQPRFDPPDPIVPHGHAAADVIAIEQPLRRGLEQWARRYTQAAVEIVGGD RPVSQLLRWSSREVYENLDRRAQLVARAGRHQPGQGRVQPVRPRVLGVHTCFLSRDAVEVSAHVRYGERSRALAARFEIT GQRWCCTALEFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19130; Mature: 19130
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPETDQTVVVLRAAAVPLASVQGTLALDLQPRFDPPDPIVPHGHAAADVIAIEQPLRR CCCCCCCCEEEEEHHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH GLEQWARRYTQAAVEIVGGDRPVSQLLRWSSREVYENLDRRAQLVARAGRHQPGQGRVQP HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VRPRVLGVHTCFLSRDAVEVSAHVRYGERSRALAARFEITGQRWCCTALEFA CCCHHEEHHHHHHCCCHHEEHHHCCCCCHHHHHHHHEEECCCCHHHHHCCCC >Mature Secondary Structure MNNPETDQTVVVLRAAAVPLASVQGTLALDLQPRFDPPDPIVPHGHAAADVIAIEQPLRR CCCCCCCCEEEEEHHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH GLEQWARRYTQAAVEIVGGDRPVSQLLRWSSREVYENLDRRAQLVARAGRHQPGQGRVQP HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VRPRVLGVHTCFLSRDAVEVSAHVRYGERSRALAARFEITGQRWCCTALEFA CCCHHEEHHHHHHCCCHHEEHHHCCCCCHHHHHHHHEEECCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA