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The map label for this gene is msrR [H]

Identifier: 119715631

GI number: 119715631

Start: 1472602

End: 1473816

Strand: Reverse

Name: msrR [H]

Synonym: Noca_1395

Alternate gene names: 119715631

Gene position: 1473816-1472602 (Counterclockwise)

Preceding gene: 119715632

Following gene: 119715630

Centisome position: 29.56

GC content: 72.43

Gene sequence:

>1215_bases
ATGACTGATCGCCCCCGGGGGGACGGCGAGCCCGGGGACGGGTCTCCCGACTTCCACTGGCTGTACGGCGGCTCCGAGGA
CCCGGGCCGCGAGCCGCGACCCGACGAGACCCGGGTGCTGCCCACGGTCCCGCGACCCGGCGAGACCCGGCCGCCCGCAC
CGGGCCGGCCGGCGACGCAGCCCGGCCGCCCCACGCCGCCCACCGGCCCGCCCACCGGTCCGCCTCCCGGCGGCCGACCC
CGCGGCCGGCGCCGGGGGCCGGGGTTCTGGCTGCGGATCGTCGTGGCCCTGCTCGTGCTGTGGGTGGTCTACCTGGTCGC
CGTGCCGCTCTGGGCCTGGAGCAAGGTCGACAAGGTCGACTTCGAGCCCTCCGGGGACCGACCCGGCGACCAGCCCGGCA
CGACGTACCTGCTGGTCGGCAGCGACTCGCGGGCCGGCCTGAGTCCCGAGGAGCGCAAGCAGCTCGGCACCGGCAACGCG
GCGGGACAGCGCACCGACACGATCATGTTGCTGCACACCGGCGACGGCCCCAACCTGCTGATGTCCATCCCTCGCGACTC
GCTCGTGGAGATCCCGGGGCACGGCACCACGAAGATCAACGCGGCCTACGCGTACGGCGGTCCCAAGCTGCTGGTGAAGA
CCATCGAGCAGAACACCGGGATCCGGGTCGACGACTACGTGGAGATCGGGCTCGGCGGGCTCGCAGGCGTCGTGGACGCC
GTCGGCGGCATCACGATCTGCCCGAAGCAGGACATGGTGGACAAGCTGGCGAACCTGGACGTGAAGAAGGGCTGCCAGGA
GGCCGACGGCACCACGGCCCTCGGCTACGCCCGGTCCCGGCACACCTCCAACATCGGCGACATCGACCGGGTCAAGCGGC
AGCGCGAGGTCGTCGCGGCGGTCGGCGACGAGGTGGTGTCGCCGTGGACGGTGCTCAACCCGGTCCGCTACTGGCGGCTG
TCCAACGCCGTCCCCGACTTCTTCGCCTTCGGCGAGGGCACCAGCCCCGTGCGGGCAGCCATGTGGGCCTCGTCGATGAC
GCACGTCAACGGCGAGAACGGGCTCAGCTGCGTGGTGCCGATCGCCGACCTCGCGGTGCACTGGGACGCCGAGCGCTCCC
AGCAGATGTTCCGCTACATCATCGAGGACAGGACCGACGCCATCCCGGCGAGCCTGTGCACGCCCACCGGACTCCCGAAG
AGCGTGACCGGATGA

Upstream 100 bases:

>100_bases
CGGGCTGACCGGCGACCACGAGTCGATGCCGGATCTCCAGGTCCTGGCCGACGGCATTGCGGAGTCCTGGTCGGAGCTGA
CCGCACGGTAGCGTCGGGGC

Downstream 100 bases:

>100_bases
GCTACCAGACCCTCGACTGGTCCGTCGACACGGACGGGATCGCCACACTCACCTTGAACCGGCCCGACCAGCTCAACGCC
TTCGACGTGACCATGGCGCG

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTDRPRGDGEPGDGSPDFHWLYGGSEDPGREPRPDETRVLPTVPRPGETRPPAPGRPATQPGRPTPPTGPPTGPPPGGRP
RGRRRGPGFWLRIVVALLVLWVVYLVAVPLWAWSKVDKVDFEPSGDRPGDQPGTTYLLVGSDSRAGLSPEERKQLGTGNA
AGQRTDTIMLLHTGDGPNLLMSIPRDSLVEIPGHGTTKINAAYAYGGPKLLVKTIEQNTGIRVDDYVEIGLGGLAGVVDA
VGGITICPKQDMVDKLANLDVKKGCQEADGTTALGYARSRHTSNIGDIDRVKRQREVVAAVGDEVVSPWTVLNPVRYWRL
SNAVPDFFAFGEGTSPVRAAMWASSMTHVNGENGLSCVVPIADLAVHWDAERSQQMFRYIIEDRTDAIPASLCTPTGLPK
SVTG

Sequences:

>Translated_404_residues
MTDRPRGDGEPGDGSPDFHWLYGGSEDPGREPRPDETRVLPTVPRPGETRPPAPGRPATQPGRPTPPTGPPTGPPPGGRP
RGRRRGPGFWLRIVVALLVLWVVYLVAVPLWAWSKVDKVDFEPSGDRPGDQPGTTYLLVGSDSRAGLSPEERKQLGTGNA
AGQRTDTIMLLHTGDGPNLLMSIPRDSLVEIPGHGTTKINAAYAYGGPKLLVKTIEQNTGIRVDDYVEIGLGGLAGVVDA
VGGITICPKQDMVDKLANLDVKKGCQEADGTTALGYARSRHTSNIGDIDRVKRQREVVAAVGDEVVSPWTVLNPVRYWRL
SNAVPDFFAFGEGTSPVRAAMWASSMTHVNGENGLSCVVPIADLAVHWDAERSQQMFRYIIEDRTDAIPASLCTPTGLPK
SVTG
>Mature_403_residues
TDRPRGDGEPGDGSPDFHWLYGGSEDPGREPRPDETRVLPTVPRPGETRPPAPGRPATQPGRPTPPTGPPTGPPPGGRPR
GRRRGPGFWLRIVVALLVLWVVYLVAVPLWAWSKVDKVDFEPSGDRPGDQPGTTYLLVGSDSRAGLSPEERKQLGTGNAA
GQRTDTIMLLHTGDGPNLLMSIPRDSLVEIPGHGTTKINAAYAYGGPKLLVKTIEQNTGIRVDDYVEIGLGGLAGVVDAV
GGITICPKQDMVDKLANLDVKKGCQEADGTTALGYARSRHTSNIGDIDRVKRQREVVAAVGDEVVSPWTVLNPVRYWRLS
NAVPDFFAFGEGTSPVRAAMWASSMTHVNGENGLSCVVPIADLAVHWDAERSQQMFRYIIEDRTDAIPASLCTPTGLPKS
VTG

Specific function: Involved in sarA attenuation. Affects resistance to oxacillin and teicoplanin, as well as the synthesis of virulence factors [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 43350; Mature: 43219

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRPRGDGEPGDGSPDFHWLYGGSEDPGREPRPDETRVLPTVPRPGETRPPAPGRPATQ
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
PGRPTPPTGPPTGPPPGGRPRGRRRGPGFWLRIVVALLVLWVVYLVAVPLWAWSKVDKVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FEPSGDRPGDQPGTTYLLVGSDSRAGLSPEERKQLGTGNAAGQRTDTIMLLHTGDGPNLL
CCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEE
MSIPRDSLVEIPGHGTTKINAAYAYGGPKLLVKTIEQNTGIRVDDYVEIGLGGLAGVVDA
EECCCCCEEECCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEECCHHHHCCCHHHHHHHH
VGGITICPKQDMVDKLANLDVKKGCQEADGTTALGYARSRHTSNIGDIDRVKRQREVVAA
HCCEEECCCHHHHHHHHCCCHHHCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHH
VGDEVVSPWTVLNPVRYWRLSNAVPDFFAFGEGTSPVRAAMWASSMTHVNGENGLSCVVP
HHHHHCCCHHHHCHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEE
IADLAVHWDAERSQQMFRYIIEDRTDAIPASLCTPTGLPKSVTG
HHHHHEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDRPRGDGEPGDGSPDFHWLYGGSEDPGREPRPDETRVLPTVPRPGETRPPAPGRPATQ
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
PGRPTPPTGPPTGPPPGGRPRGRRRGPGFWLRIVVALLVLWVVYLVAVPLWAWSKVDKVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FEPSGDRPGDQPGTTYLLVGSDSRAGLSPEERKQLGTGNAAGQRTDTIMLLHTGDGPNLL
CCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEE
MSIPRDSLVEIPGHGTTKINAAYAYGGPKLLVKTIEQNTGIRVDDYVEIGLGGLAGVVDA
EECCCCCEEECCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEECCHHHHCCCHHHHHHHH
VGGITICPKQDMVDKLANLDVKKGCQEADGTTALGYARSRHTSNIGDIDRVKRQREVVAA
HCCEEECCCHHHHHHHHCCCHHHCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHH
VGDEVVSPWTVLNPVRYWRLSNAVPDFFAFGEGTSPVRAAMWASSMTHVNGENGLSCVVP
HHHHHCCCHHHHCHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEE
IADLAVHWDAERSQQMFRYIIEDRTDAIPASLCTPTGLPKSVTG
HHHHHEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12878519 [H]