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The map label for this gene is yaeJ [H]

Identifier: 119715623

GI number: 119715623

Start: 1464253

End: 1464705

Strand: Reverse

Name: yaeJ [H]

Synonym: Noca_1387

Alternate gene names: 119715623

Gene position: 1464705-1464253 (Counterclockwise)

Preceding gene: 119715624

Following gene: 119715621

Centisome position: 29.38

GC content: 76.38

Gene sequence:

>453_bases
GTGGCGCAAGCGACGCTGATCCCGGGGATGGACCTCGTCGTCCCGCCCGGGCCCGGTCTGCCTGCCGGGCTGGTGGTCCC
GGAGGGCGAGCTGGTGGAGCGCTTCTCCCGCTCGCCGGGCCCCGGCGGGCAGTCGGTGAACACCACCGACAGCCGGGTCG
AGCTGGAGTACGACGCGGCCGTCTCGACTGTCCTCGACGACGCCCAGCGGGCTCGTGTCGTCGGCCGGCTCGGCTCGCCC
GTGCGGGTGGTCGCCAGCGAGCACCGCTCCCAGCACCGCAACCGGGTCGCCGCCCGGGAGCGGCTCGCGGAACGGCTGCG
CGAGGCACTCGCGCCCCCGCCGCCACCCCGCCGACCGACCAAGCCGACCCGTGGCTCCCAGCAGCGCCGGCTGGAGGCCA
AGAAGCAGCGCGGCCGGACGAAGTCGCTGCGCGGTCGGGTGCGCGACGACTGA

Upstream 100 bases:

>100_bases
AGGGCGTGTGGTTCCAGCTCGGCGTCATCGACGAGGACGCGTTCGCGCGGACCACGCAGGCCGGCGTGCCGATGGTGATG
GACACCTGTCCCGCCATCGA

Downstream 100 bases:

>100_bases
GGCACGCGACCGGTCCGAGGCGTCACCTGGCAGCCGAACCCCGCCGGCGTGTCGCCCCTCAGCTCTCCAGCCGGGCGAGC
TCCTCGTCGACGATCGACGG

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAQATLIPGMDLVVPPGPGLPAGLVVPEGELVERFSRSPGPGGQSVNTTDSRVELEYDAAVSTVLDDAQRARVVGRLGSP
VRVVASEHRSQHRNRVAARERLAERLREALAPPPPPRRPTKPTRGSQQRRLEAKKQRGRTKSLRGRVRDD

Sequences:

>Translated_150_residues
MAQATLIPGMDLVVPPGPGLPAGLVVPEGELVERFSRSPGPGGQSVNTTDSRVELEYDAAVSTVLDDAQRARVVGRLGSP
VRVVASEHRSQHRNRVAARERLAERLREALAPPPPPRRPTKPTRGSQQRRLEAKKQRGRTKSLRGRVRDD
>Mature_149_residues
AQATLIPGMDLVVPPGPGLPAGLVVPEGELVERFSRSPGPGGQSVNTTDSRVELEYDAAVSTVLDDAQRARVVGRLGSPV
RVVASEHRSQHRNRVAARERLAERLREALAPPPPPRRPTKPTRGSQQRRLEAKKQRGRTKSLRGRVRDD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=37.8787878787879, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16388; Mature: 16257

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQATLIPGMDLVVPPGPGLPAGLVVPEGELVERFSRSPGPGGQSVNTTDSRVELEYDAA
CCCCCCCCCCCEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHH
VSTVLDDAQRARVVGRLGSPVRVVASEHRSQHRNRVAARERLAERLREALAPPPPPRRPT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KPTRGSQQRRLEAKKQRGRTKSLRGRVRDD
CCCCCCHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure 
AQATLIPGMDLVVPPGPGLPAGLVVPEGELVERFSRSPGPGGQSVNTTDSRVELEYDAA
CCCCCCCCCCEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHH
VSTVLDDAQRARVVGRLGSPVRVVASEHRSQHRNRVAARERLAERLREALAPPPPPRRPT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KPTRGSQQRRLEAKKQRGRTKSLRGRVRDD
CCCCCCHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]