| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715610
Identifier: 119715610
GI number: 119715610
Start: 1452261
End: 1452893
Strand: Reverse
Name: 119715610
Synonym: Noca_1374
Alternate gene names: NA
Gene position: 1452893-1452261 (Counterclockwise)
Preceding gene: 119715611
Following gene: 119715608
Centisome position: 29.14
GC content: 77.25
Gene sequence:
>633_bases ATGGCCGACCACCGAACCCGTGGCGCGCAGCTGCGCACGCCCGCTCCCACGTTGGAGCCGGACGCTGCGTTCCTTGCGCG CCTGAGCTCGCTCGCCGCGGCCGGCGCTCCGGCACCGGCCGGCGCAGCGGCACCGCGCCGGGCCTGGCGCGTGGGGCTGG CTGCGGCGAGTGTCGCGACGGTGCTGGTCGGCGGCACCTGGCTCAGCGGCTTCGCCGACAACGGCTCGCCGGCGCCGCCG GCAACGCCCCCGAGCGGGCCCACCACCCTCCCGAGCACCACGCCCGACTCCTCGACGAGCGACGGGCCCGACGAGACCGG CCAGACCTCGGACGACACCTTGCCCGGGTCGACCGGCGCCACCGACGGCGGCAGTGCCCCGGGCGCCGGCCCCACCGGGA CCCACGAGCCCCAGGGTGAGGACGAGTCGGACCAGGCCGGACCCACCGGCACTCCGGGAGTCGGGCAGGGACAGCAGCCC GGCGAGAACGAGGGACCCGACCACCAGGGGCAGGGGCCGGACGAGCATGCCGGCGACCATCCCGACGAGCACGCCACCCA GAAGGCGGACAATGCGGACCAGGCCGCCGGGGAGCACCCCGGCGGCGGAGCAGGCGGCAGACAAGCCAGGTGA
Upstream 100 bases:
>100_bases ACGCCTCCCCCGAGCCCGCTGAGGGCTGATCCAGGACCGGCGGTCCCGACGTTGACCCACCCCCGACTAACGTCGGGACC GCCAACCCTGCGAGGACGAC
Downstream 100 bases:
>100_bases GCAGCGACGACGACGTGGTGGCGTCCGCCAAGCGGGGCGACGCCGAGGCGTGGCGCGCCCTCTACCGCAGCCACGCCGGC CGTCTGCTGGTCTGGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MADHRTRGAQLRTPAPTLEPDAAFLARLSSLAAAGAPAPAGAAAPRRAWRVGLAAASVATVLVGGTWLSGFADNGSPAPP ATPPSGPTTLPSTTPDSSTSDGPDETGQTSDDTLPGSTGATDGGSAPGAGPTGTHEPQGEDESDQAGPTGTPGVGQGQQP GENEGPDHQGQGPDEHAGDHPDEHATQKADNADQAAGEHPGGGAGGRQAR
Sequences:
>Translated_210_residues MADHRTRGAQLRTPAPTLEPDAAFLARLSSLAAAGAPAPAGAAAPRRAWRVGLAAASVATVLVGGTWLSGFADNGSPAPP ATPPSGPTTLPSTTPDSSTSDGPDETGQTSDDTLPGSTGATDGGSAPGAGPTGTHEPQGEDESDQAGPTGTPGVGQGQQP GENEGPDHQGQGPDEHAGDHPDEHATQKADNADQAAGEHPGGGAGGRQAR >Mature_209_residues ADHRTRGAQLRTPAPTLEPDAAFLARLSSLAAAGAPAPAGAAAPRRAWRVGLAAASVATVLVGGTWLSGFADNGSPAPPA TPPSGPTTLPSTTPDSSTSDGPDETGQTSDDTLPGSTGATDGGSAPGAGPTGTHEPQGEDESDQAGPTGTPGVGQGQQPG ENEGPDHQGQGPDEHAGDHPDEHATQKADNADQAAGEHPGGGAGGRQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20417; Mature: 20285
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHRTRGAQLRTPAPTLEPDAAFLARLSSLAAAGAPAPAGAAAPRRAWRVGLAAASVAT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VLVGGTWLSGFADNGSPAPPATPPSGPTTLPSTTPDSSTSDGPDETGQTSDDTLPGSTGA HHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDGGSAPGAGPTGTHEPQGEDESDQAGPTGTPGVGQGQQPGENEGPDHQGQGPDEHAGDH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDEHATQKADNADQAAGEHPGGGAGGRQAR CHHHHHHHCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ADHRTRGAQLRTPAPTLEPDAAFLARLSSLAAAGAPAPAGAAAPRRAWRVGLAAASVAT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VLVGGTWLSGFADNGSPAPPATPPSGPTTLPSTTPDSSTSDGPDETGQTSDDTLPGSTGA HHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDGGSAPGAGPTGTHEPQGEDESDQAGPTGTPGVGQGQQPGENEGPDHQGQGPDEHAGDH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDEHATQKADNADQAAGEHPGGGAGGRQAR CHHHHHHHCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA