| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is narK2 [H]
Identifier: 119715581
GI number: 119715581
Start: 1419949
End: 1421193
Strand: Direct
Name: narK2 [H]
Synonym: Noca_1345
Alternate gene names: 119715581
Gene position: 1419949-1421193 (Clockwise)
Preceding gene: 119715579
Following gene: 119715582
Centisome position: 28.48
GC content: 70.92
Gene sequence:
>1245_bases ATGACCGTGGCGGAGGAGGGCATCGTGGGCAGTCAGCGCGGCCTCAACGGGCCCTGGACGATGCTGGTGATGGCGACCAT CGGGTTCGCCGTGAACTTCTGGGCGTGGGCGCTGATCAGCCCGCTCGGCCCGCTGTTCCGGGACAACGGCCGGGTGGGCA CGCTCAGCGAGTCCGACGTCGCGCTGATGGTCGCGGTGCCGGTCGTGGTCGGTTCACTGGGCCGGATCCTGGTGGGCGCG CTGACGGACAAGTACGGCGGCCGGGTGATGTTCCCGTTGATCTCGGCGATCACGATCGTCCCGATCCTGTTTCTGGCGTT CGTCGCCCTGGACTCCTACACGCTGATCCTGGTGGGTGGGTTCTTCCTCGGCATCGCCGGCACGGCGTTCGCCGTCGGCG TGCCGTTCGTCAACGCGTGGTTCCCGCCGGAGAAGCGCGGGCTCGCCGTCGGCATCTTCGGCGCCGGCATGGGCGGCACG GCGATCAGCGCGCTGACCACGGTCAAGCTCTACAAGAACATCGGTGACACCGCGCCGTTCTTGATCACCGCCACGGTGCT CGCGGTGTACGCCGCGGCGGCCTGGCTGATCCTGCGCGACGCCCCCGGCCGCACCCCGCCGACCACCTCCCTGGCCGCGC GCCTGGCGGCCACCTCGAAGCTGTCGATCACCTGGCAGGCCTGCATCCTCTACGCCGTCGCCTTCGGCGGGTACGTCGCG TTCTCGGTCTACCTGCCGGCGTACCTCAAGACCGCCCACGGCCTCACCCCGGCAGACGCGTCCAACCGGATGGCGGGCTT CGTGGTGATCGCTGTGCTGATGCGCCCGGTCGGCGGCTGGCTCTCCGACCGGTTCGGCGCGGTCCCCGTGCTCGCCTCCG GCTACGCCGTGGTCGTGGTCTGCGCCGGCATCTCCGCCGGCGACCCGCCGCTGGACGGGATCGGCACCGTCGTGTTCCTC GCGATGGCCGCGGCCCTCGGCTCCGGCAGCGGCGCGACCTTCGCCCTGATCGCCAAGGTCACCGAGCCCTCGCGGGTCGG TGGCGTCACCGGCCTGGTCGGCGCCGCCGGCGGCCTGGGCGGCTTCGCGCCCCCGCTGGTGATGGGCTACGTCTACGGCC GCACCGATTCCTACGCCATCGGTCTGTGGATGCTGTCGGTGACAGCAGCCCTGACCCTCGTGCTCACCCTGACCGTGGTT CGACGGACCGCGGCCGAACACCGAACCGAGAGGATTCCTGCGTGA
Upstream 100 bases:
>100_bases AGGGCCGCCGAGGGTGGTCCCTGGAGTTGGGGGTGTCCCGGTTGGCAACGTCAGTGATTTCGGACAAGGTGGTCGTGGAC ACGATCTCGGGAGGTCGGGC
Downstream 100 bases:
>100_bases CGATCGAGGGCACCTCCCAGCCCGGGCTCGACGGACCGCTCAGCGATGCGCTGGTGCGAAGTCGGCGGTACTTCACCCGG GGGACCGTCTCGGAGGATCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTVAEEGIVGSQRGLNGPWTMLVMATIGFAVNFWAWALISPLGPLFRDNGRVGTLSESDVALMVAVPVVVGSLGRILVGA LTDKYGGRVMFPLISAITIVPILFLAFVALDSYTLILVGGFFLGIAGTAFAVGVPFVNAWFPPEKRGLAVGIFGAGMGGT AISALTTVKLYKNIGDTAPFLITATVLAVYAAAAWLILRDAPGRTPPTTSLAARLAATSKLSITWQACILYAVAFGGYVA FSVYLPAYLKTAHGLTPADASNRMAGFVVIAVLMRPVGGWLSDRFGAVPVLASGYAVVVVCAGISAGDPPLDGIGTVVFL AMAAALGSGSGATFALIAKVTEPSRVGGVTGLVGAAGGLGGFAPPLVMGYVYGRTDSYAIGLWMLSVTAALTLVLTLTVV RRTAAEHRTERIPA
Sequences:
>Translated_414_residues MTVAEEGIVGSQRGLNGPWTMLVMATIGFAVNFWAWALISPLGPLFRDNGRVGTLSESDVALMVAVPVVVGSLGRILVGA LTDKYGGRVMFPLISAITIVPILFLAFVALDSYTLILVGGFFLGIAGTAFAVGVPFVNAWFPPEKRGLAVGIFGAGMGGT AISALTTVKLYKNIGDTAPFLITATVLAVYAAAAWLILRDAPGRTPPTTSLAARLAATSKLSITWQACILYAVAFGGYVA FSVYLPAYLKTAHGLTPADASNRMAGFVVIAVLMRPVGGWLSDRFGAVPVLASGYAVVVVCAGISAGDPPLDGIGTVVFL AMAAALGSGSGATFALIAKVTEPSRVGGVTGLVGAAGGLGGFAPPLVMGYVYGRTDSYAIGLWMLSVTAALTLVLTLTVV RRTAAEHRTERIPA >Mature_413_residues TVAEEGIVGSQRGLNGPWTMLVMATIGFAVNFWAWALISPLGPLFRDNGRVGTLSESDVALMVAVPVVVGSLGRILVGAL TDKYGGRVMFPLISAITIVPILFLAFVALDSYTLILVGGFFLGIAGTAFAVGVPFVNAWFPPEKRGLAVGIFGAGMGGTA ISALTTVKLYKNIGDTAPFLITATVLAVYAAAAWLILRDAPGRTPPTTSLAARLAATSKLSITWQACILYAVAFGGYVAF SVYLPAYLKTAHGLTPADASNRMAGFVVIAVLMRPVGGWLSDRFGAVPVLASGYAVVVVCAGISAGDPPLDGIGTVVFLA MAAALGSGSGATFALIAKVTEPSRVGGVTGLVGAAGGLGGFAPPLVMGYVYGRTDSYAIGLWMLSVTAALTLVLTLTVVR RTAAEHRTERIPA
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=371, Percent_Identity=24.2587601078167, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42504; Mature: 42372
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAEEGIVGSQRGLNGPWTMLVMATIGFAVNFWAWALISPLGPLFRDNGRVGTLSESDV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCE ALMVAVPVVVGSLGRILVGALTDKYGGRVMFPLISAITIVPILFLAFVALDSYTLILVGG EHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FFLGIAGTAFAVGVPFVNAWFPPEKRGLAVGIFGAGMGGTAISALTTVKLYKNIGDTAPF HHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHH LITATVLAVYAAAAWLILRDAPGRTPPTTSLAARLAATSKLSITWQACILYAVAFGGYVA HHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHH FSVYLPAYLKTAHGLTPADASNRMAGFVVIAVLMRPVGGWLSDRFGAVPVLASGYAVVVV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCCEEEEE CAGISAGDPPLDGIGTVVFLAMAAALGSGSGATFALIAKVTEPSRVGGVTGLVGAAGGLG EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHCCCHHHHHCCCCCC GFAPPLVMGYVYGRTDSYAIGLWMLSVTAALTLVLTLTVVRRTAAEHRTERIPA CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVAEEGIVGSQRGLNGPWTMLVMATIGFAVNFWAWALISPLGPLFRDNGRVGTLSESDV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCE ALMVAVPVVVGSLGRILVGALTDKYGGRVMFPLISAITIVPILFLAFVALDSYTLILVGG EHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FFLGIAGTAFAVGVPFVNAWFPPEKRGLAVGIFGAGMGGTAISALTTVKLYKNIGDTAPF HHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHH LITATVLAVYAAAAWLILRDAPGRTPPTTSLAARLAATSKLSITWQACILYAVAFGGYVA HHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHH FSVYLPAYLKTAHGLTPADASNRMAGFVVIAVLMRPVGGWLSDRFGAVPVLASGYAVVVV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCCEEEEE CAGISAGDPPLDGIGTVVFLAMAAALGSGSGATFALIAKVTEPSRVGGVTGLVGAAGGLG EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHCCCHHHHHCCCCCC GFAPPLVMGYVYGRTDSYAIGLWMLSVTAALTLVLTLTVVRRTAAEHRTERIPA CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]