| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is narP [C]
Identifier: 119715573
GI number: 119715573
Start: 1407273
End: 1407839
Strand: Reverse
Name: narP [C]
Synonym: Noca_1337
Alternate gene names: 119715573
Gene position: 1407839-1407273 (Counterclockwise)
Preceding gene: 119715575
Following gene: 119715572
Centisome position: 28.24
GC content: 74.25
Gene sequence:
>567_bases GTGAGCCACCAGGACGTGCTGGGCAAGGGGTTGATCGCGATGCTCGCCGAGCACCCGGAGCGGGCCGAGGTCACCGACGT CGACCGGGCGCAGGTCGTCCTGTACGACGCGCTCGGCGTGCACCGCACCCGGGGCGCCGACCTGGAGCAGCTGGCCCGCG ACAGCCGGGCCGTGATCTTGGCGGTGAGCCGTGACCTGCGCCCCGACCTGCGCGCCCGGGCGCTCGCCGCCGGCGCCCAT GGTTGGATCTCGATGAGCGTCGACTCGGCCGGGCTCGTCGAGGCGGTCGAGGCCGCGGCGGCCGGGCACGCGCTGCCCGG GTCGGGGGACCCACTGGGCGCGTCCGTCGCGCTCACCGCCCGGGAGGTCGAGGTCCTCGCGCTGATCACCCAGGGCATGA GCAACCCGGAGATCGCGGAGCACCTGTACCTGTCGATCAACTCGGTCAAGACCTACATCCGCTCGGCGTACGCCAAGATC GGCGTGACCTCGCGGGCCCGGGCGGTCGCGTGGTGCCTGCTGCACGGGTTCGCCCCGCCGGACCCCGAGGGGCCGCGGCT CGCATGA
Upstream 100 bases:
>100_bases TCCGGAATTCACCCCTTCGGGCGTACTGCCAGACCGGCGCGCGGAGGTCCCCGACCGACACGATGGGCACATGCCGGCGC AACCGACCAGGGTGGGGATC
Downstream 100 bases:
>100_bases GGCCGGCCTCCCTGGGGCACCCAGGAGGTATGAGCAGCGACACGCGCGCCGGTACGGCGCCGCAGGACCGGGCCGGCGAT GCCGCCCGCGATCCCTCGAG
Product: regulatory protein LuxR
Products: NA
Alternate protein names: Two-Component System Response Regulator; Two-Component Response Regulator; LuxR Family Two Component Transcriptional Regulator; Two Component Transcriptional Regulator LuxR Family; Two Component Response Regulator
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSHQDVLGKGLIAMLAEHPERAEVTDVDRAQVVLYDALGVHRTRGADLEQLARDSRAVILAVSRDLRPDLRARALAAGAH GWISMSVDSAGLVEAVEAAAAGHALPGSGDPLGASVALTAREVEVLALITQGMSNPEIAEHLYLSINSVKTYIRSAYAKI GVTSRARAVAWCLLHGFAPPDPEGPRLA
Sequences:
>Translated_188_residues MSHQDVLGKGLIAMLAEHPERAEVTDVDRAQVVLYDALGVHRTRGADLEQLARDSRAVILAVSRDLRPDLRARALAAGAH GWISMSVDSAGLVEAVEAAAAGHALPGSGDPLGASVALTAREVEVLALITQGMSNPEIAEHLYLSINSVKTYIRSAYAKI GVTSRARAVAWCLLHGFAPPDPEGPRLA >Mature_187_residues SHQDVLGKGLIAMLAEHPERAEVTDVDRAQVVLYDALGVHRTRGADLEQLARDSRAVILAVSRDLRPDLRARALAAGAHG WISMSVDSAGLVEAVEAAAAGHALPGSGDPLGASVALTAREVEVLALITQGMSNPEIAEHLYLSINSVKTYIRSAYAKIG VTSRARAVAWCLLHGFAPPDPEGPRLA
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19827; Mature: 19696
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQDVLGKGLIAMLAEHPERAEVTDVDRAQVVLYDALGVHRTRGADLEQLARDSRAVIL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEHHHCCCCCCCCCHHHHHCCCCEEEE AVSRDLRPDLRARALAAGAHGWISMSVDSAGLVEAVEAAAAGHALPGSGDPLGASVALTA EECCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEHH REVEVLALITQGMSNPEIAEHLYLSINSVKTYIRSAYAKIGVTSRARAVAWCLLHGFAPP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC DPEGPRLA CCCCCCCC >Mature Secondary Structure SHQDVLGKGLIAMLAEHPERAEVTDVDRAQVVLYDALGVHRTRGADLEQLARDSRAVIL CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEHHHCCCCCCCCCHHHHHCCCCEEEE AVSRDLRPDLRARALAAGAHGWISMSVDSAGLVEAVEAAAAGHALPGSGDPLGASVALTA EECCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEHH REVEVLALITQGMSNPEIAEHLYLSINSVKTYIRSAYAKIGVTSRARAVAWCLLHGFAPP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC DPEGPRLA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA