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The map label for this gene is rnz [C]

Identifier: 119715552

GI number: 119715552

Start: 1388795

End: 1389565

Strand: Direct

Name: rnz [C]

Synonym: Noca_1316

Alternate gene names: 119715552

Gene position: 1388795-1389565 (Clockwise)

Preceding gene: 119715551

Following gene: 119715556

Centisome position: 27.85

GC content: 73.93

Gene sequence:

>771_bases
ATGCGAGTGACGATCGTGGGCTGCTCAGGCTCCTACCCGGGCCCGGAGTCGCCGGCCAGCTGCTACCTGCTCGAGGCCGA
GGACGGCTCCGATCGCACCTGGCGGGTGCTCCTTGACCTCGGCAACGGGTCGCTCGGCGCGCTGCACCGCTTCGCCGACC
CACTCGCCATCGACGCGGTGCTGCTCAGCCACCTGCACGCCGACCACTGCCTGGACCTGTGCGGCTACTACGTGCTGCGC
AAGTACCACCCGCTCGGCCCGCAGCCGCGGATCCCGGTGTGGGGCCCGGAGGGCACGGCCGACCGGATGGCCCGCGCCTA
CGACCTGCCGAGTGACCCGGGGATGCACCACGAGTTCGAGTTCCACGAGTGGCACGGCGCCGAGCAGATCGGCCCGTTCC
GGGTCGAGCCGGTGGCGGTCAACCACCCGGTCCCGGCGTACGGGCTGCGGGTCACCGCCGACGGCATGACGCTCGCCTAC
ACCGGCGACACCGGCCCGTGCGCGGCGCTCGACGACCTCGCGCACGACGCGGACCTGTTCCTCGCCGAGGCCTCGTTCCG
TTCCGGCGACGACAACCCGCCGGACCTGCACCTCACCGGCGCCGACGGCGGCGAGGTGGCGGCCCGGGCCGGCGTCCGCC
GGCTGGTGCTCACCCATGTCCCGCCCTGGCACGACCCGCAGGACGCGGTGGCCGAGGCGGTCGCGTCGTACGACGGGCCG
GTCGAGCTCGCCCGCCCCGGGACGGTCTACGACCTGACAAGCGGCTGCTGA

Upstream 100 bases:

>100_bases
GACCGGTGCGCCGGGCGAGTTCGAGACCATCGGGCGCCGCTTCCTCGGGCCGGAGATGGCGGGGGCGTCGCAGTTCGTGG
GCGGGCTGGCGGTGTAGGCG

Downstream 100 bases:

>100_bases
GGCTACGGCGTCGCGAACGTCACCTTCACCGGCACGCTGGTGCTCGCATCGGGCGGGCTCTGGATGCCGACCATCAGGTT
CTTGCCGACGACCCGGCGCA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRVTIVGCSGSYPGPESPASCYLLEAEDGSDRTWRVLLDLGNGSLGALHRFADPLAIDAVLLSHLHADHCLDLCGYYVLR
KYHPLGPQPRIPVWGPEGTADRMARAYDLPSDPGMHHEFEFHEWHGAEQIGPFRVEPVAVNHPVPAYGLRVTADGMTLAY
TGDTGPCAALDDLAHDADLFLAEASFRSGDDNPPDLHLTGADGGEVAARAGVRRLVLTHVPPWHDPQDAVAEAVASYDGP
VELARPGTVYDLTSGC

Sequences:

>Translated_256_residues
MRVTIVGCSGSYPGPESPASCYLLEAEDGSDRTWRVLLDLGNGSLGALHRFADPLAIDAVLLSHLHADHCLDLCGYYVLR
KYHPLGPQPRIPVWGPEGTADRMARAYDLPSDPGMHHEFEFHEWHGAEQIGPFRVEPVAVNHPVPAYGLRVTADGMTLAY
TGDTGPCAALDDLAHDADLFLAEASFRSGDDNPPDLHLTGADGGEVAARAGVRRLVLTHVPPWHDPQDAVAEAVASYDGP
VELARPGTVYDLTSGC
>Mature_256_residues
MRVTIVGCSGSYPGPESPASCYLLEAEDGSDRTWRVLLDLGNGSLGALHRFADPLAIDAVLLSHLHADHCLDLCGYYVLR
KYHPLGPQPRIPVWGPEGTADRMARAYDLPSDPGMHHEFEFHEWHGAEQIGPFRVEPVAVNHPVPAYGLRVTADGMTLAY
TGDTGPCAALDDLAHDADLFLAEASFRSGDDNPPDLHLTGADGGEVAARAGVRRLVLTHVPPWHDPQDAVAEAVASYDGP
VELARPGTVYDLTSGC

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the atsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: NA

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 27491; Mature: 27491

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTIVGCSGSYPGPESPASCYLLEAEDGSDRTWRVLLDLGNGSLGALHRFADPLAIDAV
CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHH
LLSHLHADHCLDLCGYYVLRKYHPLGPQPRIPVWGPEGTADRMARAYDLPSDPGMHHEFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEC
FHEWHGAEQIGPFRVEPVAVNHPVPAYGLRVTADGMTLAYTGDTGPCAALDDLAHDADLF
HHHCCCCCCCCCEEECEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHCCCCCEE
LAEASFRSGDDNPPDLHLTGADGGEVAARAGVRRLVLTHVPPWHDPQDAVAEAVASYDGP
EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCC
VELARPGTVYDLTSGC
EEECCCCCEEECCCCC
>Mature Secondary Structure
MRVTIVGCSGSYPGPESPASCYLLEAEDGSDRTWRVLLDLGNGSLGALHRFADPLAIDAV
CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHH
LLSHLHADHCLDLCGYYVLRKYHPLGPQPRIPVWGPEGTADRMARAYDLPSDPGMHHEFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEC
FHEWHGAEQIGPFRVEPVAVNHPVPAYGLRVTADGMTLAYTGDTGPCAALDDLAHDADLF
HHHCCCCCCCCCEEECEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHCCCCCEE
LAEASFRSGDDNPPDLHLTGADGGEVAARAGVRRLVLTHVPPWHDPQDAVAEAVASYDGP
EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCC
VELARPGTVYDLTSGC
EEECCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]