| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715545
Identifier: 119715545
GI number: 119715545
Start: 1383903
End: 1384271
Strand: Direct
Name: 119715545
Synonym: Noca_1309
Alternate gene names: NA
Gene position: 1383903-1384271 (Clockwise)
Preceding gene: 119715544
Following gene: 119715546
Centisome position: 27.76
GC content: 75.07
Gene sequence:
>369_bases GTGCTGCTCACCCGGCGGGTCGACAACGGCGAGTGGGCCCCGATCACCGGGATCCTCGACCCGGGCGAGGAGCCGGCCGT CGGCGCCGCGCGCGAGGCGCTGGAGGAGACCGGCGTCCAGGTGCGGGTCGACCGGCTCGCCTCGGTGGGCGCCAGCCCCC AGGTGGTGCACGGCAACGGAGACCTCGGGGTCTACCTCGACCTCACCTTCGCCTGCACGTGGGTGTCCGGCGAGGCCCGG GTCGCCGACGACGAGAACACCGACGTGCGCTGGTGGCCGGTCGGGGCGCTGCCGCCCATGAGCGACTGGCTCCGGGAGCG GATCGACGACGTCCTCGCGGGTGAGACCGCGGCGAGGTTCCGGCGCTGA
Upstream 100 bases:
>100_bases CACCCTTCGTCGCCGAGCTCCGCCAGCTGGTCGGGACCCTCGAGCTCTGGCGCCCGCCGTCACCGCGATCGTCCTGCGCG ACGCTCCGGTCGGCACCGAG
Downstream 100 bases:
>100_bases CCACCTACCCTGGAGCCGTGCTGACCATCGCCCGAGCGACCTACGACGCCATCGTCGCGCACGCCCGCCGCGACCACCCG GACGAGGCCTGCGGCATCGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/NUDIX-Family Protein; MutT/Nudix Family Protein; Phosphohydrolase; NUDIX Domain-Containing Protein; Mut-Like Protein; ADP-Ribose Pyrophosphatase; MutT/NUDIX-Protein; MutT-Family Protein; MutT/NUDIX Family Protein; NTP Pyrophosphohydrolase; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Superfamily Hydrolase; NUDIX Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MLLTRRVDNGEWAPITGILDPGEEPAVGAAREALEETGVQVRVDRLASVGASPQVVHGNGDLGVYLDLTFACTWVSGEAR VADDENTDVRWWPVGALPPMSDWLRERIDDVLAGETAARFRR
Sequences:
>Translated_122_residues MLLTRRVDNGEWAPITGILDPGEEPAVGAAREALEETGVQVRVDRLASVGASPQVVHGNGDLGVYLDLTFACTWVSGEAR VADDENTDVRWWPVGALPPMSDWLRERIDDVLAGETAARFRR >Mature_122_residues MLLTRRVDNGEWAPITGILDPGEEPAVGAAREALEETGVQVRVDRLASVGASPQVVHGNGDLGVYLDLTFACTWVSGEAR VADDENTDVRWWPVGALPPMSDWLRERIDDVLAGETAARFRR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13327; Mature: 13327
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTRRVDNGEWAPITGILDPGEEPAVGAAREALEETGVQVRVDRLASVGASPQVVHGNG CCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHCCCCCEEEECCC DLGVYLDLTFACTWVSGEARVADDENTDVRWWPVGALPPMSDWLRERIDDVLAGETAARF CEEEEEEEEEEEEEECCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHH RR CC >Mature Secondary Structure MLLTRRVDNGEWAPITGILDPGEEPAVGAAREALEETGVQVRVDRLASVGASPQVVHGNG CCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHCCCCCEEEECCC DLGVYLDLTFACTWVSGEARVADDENTDVRWWPVGALPPMSDWLRERIDDVLAGETAARF CEEEEEEEEEEEEEECCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHH RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA