Click here to switch to the map view.

The map label for this gene is yerB [H]

Identifier: 119715522

GI number: 119715522

Start: 1360369

End: 1361397

Strand: Direct

Name: yerB [H]

Synonym: Noca_1286

Alternate gene names: 119715522

Gene position: 1360369-1361397 (Clockwise)

Preceding gene: 119715521

Following gene: 119715524

Centisome position: 27.28

GC content: 72.3

Gene sequence:

>1029_bases
GTGCGCCGTGCCCGCCTCACCTCGACCTCGACCCTGGCGGCCATCGCCGTCGCCGCGAGCCTCGTGCTCGCCGGCTGCGG
CGGTGGCTCGGACTCCAGCGACGAAGACCAGACGCCCGCCTCGCAGCAGGTCGCCGGCGCCGAGGAGGTCGCGGCGACCT
GGCCGCTGACCGGGCTCCCGGTCACCGGTGACGAGGAGGTCGCGCAGGAGCACCCCGTGCTCGTCACGAAGATGGACAAC
ACCTACGCCAGCGCGCCGCAGGTCGGCCTCGGCTCGGCGGACCTGGTGGTCGAGGAGCTGGTGGAGGGCGGGCTGACCCG
GCTCGCGGCCTTCTACTACTCCGAGATCCCGGAGCTGGTCGGTCCGGTGCGGTCGATGCGGGCCAGCGACATCGGCATCG
TGTCCCCGGTCGACGGCACCATGGTCACCAGCGGTGCTGCGGGGCAGACGATCGCGCGGATCCGCGGCGCCGGGATCCCG
TTCTTCGCCGAGGGCTCGAAGGGCTTCGCGCGGGACAGCTCCCGCAGCGCGCCGTACAACCTCTTCGCGAACCTCGCCGA
CGTCGCGACCGAGGCGGCGACCGACGCGACCCGCCCCGACGACTACCTGCCGTGGGGCCCGGAGGAGGACTTCCCCAAGG
GGCAGCCGGCGAAGAAGATCGCCGCGGTGTTCGGCGGCGGGCACACCACCAACTGGACCTTCGACGGCAAGGGCTACGTC
AACGAGAACACCTACGCGGCCGACGGCGACGAGTTCCCGGCCGACACGGTGCTGGTGCTCCGGGTCACCGTGGGCGACGC
GGGCTACCGCGACCCGGCGGGCAACCCGGTGCCCGAGACCAAGCTCGAGGGCAAGGGCGAGGCGATGATCTTCCACGGCG
GCCGGCTGGTGCGCGGCACCTGGAAGAAGACCGGCCTGGACGCGCCGATCACGCTGTCGACCAAGGCCGGTGAGCTGGAG
GTCCCGGTGGGGCACACCTGGATCGAGCTGGTCCCCGCGGCGAACGGGAACGTCACCTTCACCAAGTAG

Upstream 100 bases:

>100_bases
GGAACCGAATCCCCGGGCGCGCCTCCCCACGTCGGTGCCGCGCCGCTGCACACTTGAAGTCGACCAGTTCACACGAGTTT
CAACGAAACGGAGCGATCCC

Downstream 100 bases:

>100_bases
GTGCGGCTCCCGGTGGGCCCGGCTCGGGGCGGACTCAGGAGGTCGTCTCGACGACCTCGCCGGACGGCAGCTCGACACCG
CTCTCGGCCAGGGCCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRRARLTSTSTLAAIAVAASLVLAGCGGGSDSSDEDQTPASQQVAGAEEVAATWPLTGLPVTGDEEVAQEHPVLVTKMDN
TYASAPQVGLGSADLVVEELVEGGLTRLAAFYYSEIPELVGPVRSMRASDIGIVSPVDGTMVTSGAAGQTIARIRGAGIP
FFAEGSKGFARDSSRSAPYNLFANLADVATEAATDATRPDDYLPWGPEEDFPKGQPAKKIAAVFGGGHTTNWTFDGKGYV
NENTYAADGDEFPADTVLVLRVTVGDAGYRDPAGNPVPETKLEGKGEAMIFHGGRLVRGTWKKTGLDAPITLSTKAGELE
VPVGHTWIELVPAANGNVTFTK

Sequences:

>Translated_342_residues
MRRARLTSTSTLAAIAVAASLVLAGCGGGSDSSDEDQTPASQQVAGAEEVAATWPLTGLPVTGDEEVAQEHPVLVTKMDN
TYASAPQVGLGSADLVVEELVEGGLTRLAAFYYSEIPELVGPVRSMRASDIGIVSPVDGTMVTSGAAGQTIARIRGAGIP
FFAEGSKGFARDSSRSAPYNLFANLADVATEAATDATRPDDYLPWGPEEDFPKGQPAKKIAAVFGGGHTTNWTFDGKGYV
NENTYAADGDEFPADTVLVLRVTVGDAGYRDPAGNPVPETKLEGKGEAMIFHGGRLVRGTWKKTGLDAPITLSTKAGELE
VPVGHTWIELVPAANGNVTFTK
>Mature_342_residues
MRRARLTSTSTLAAIAVAASLVLAGCGGGSDSSDEDQTPASQQVAGAEEVAATWPLTGLPVTGDEEVAQEHPVLVTKMDN
TYASAPQVGLGSADLVVEELVEGGLTRLAAFYYSEIPELVGPVRSMRASDIGIVSPVDGTMVTSGAAGQTIARIRGAGIP
FFAEGSKGFARDSSRSAPYNLFANLADVATEAATDATRPDDYLPWGPEEDFPKGQPAKKIAAVFGGGHTTNWTFDGKGYV
NENTYAADGDEFPADTVLVLRVTVGDAGYRDPAGNPVPETKLEGKGEAMIFHGGRLVRGTWKKTGLDAPITLSTKAGELE
VPVGHTWIELVPAANGNVTFTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021416
- InterPro:   IPR023158 [H]

Pfam domain/function: PF11258 DUF3048 [H]

EC number: NA

Molecular weight: Translated: 35612; Mature: 35612

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRARLTSTSTLAAIAVAASLVLAGCGGGSDSSDEDQTPASQQVAGAEEVAATWPLTGLP
CCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCC
VTGDEEVAQEHPVLVTKMDNTYASAPQVGLGSADLVVEELVEGGLTRLAAFYYSEIPELV
CCCCHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPVRSMRASDIGIVSPVDGTMVTSGAAGQTIARIRGAGIPFFAEGSKGFARDSSRSAPYN
HHHHHHHHCCCCEECCCCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHH
LFANLADVATEAATDATRPDDYLPWGPEEDFPKGQPAKKIAAVFGGGHTTNWTFDGKGYV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCEE
NENTYAADGDEFPADTVLVLRVTVGDAGYRDPAGNPVPETKLEGKGEAMIFHGGRLVRGT
CCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEC
WKKTGLDAPITLSTKAGELEVPVGHTWIELVPAANGNVTFTK
HHHCCCCCCEEEECCCCEEECCCCCEEEEEEECCCCCEEEEC
>Mature Secondary Structure
MRRARLTSTSTLAAIAVAASLVLAGCGGGSDSSDEDQTPASQQVAGAEEVAATWPLTGLP
CCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCC
VTGDEEVAQEHPVLVTKMDNTYASAPQVGLGSADLVVEELVEGGLTRLAAFYYSEIPELV
CCCCHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPVRSMRASDIGIVSPVDGTMVTSGAAGQTIARIRGAGIPFFAEGSKGFARDSSRSAPYN
HHHHHHHHCCCCEECCCCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHH
LFANLADVATEAATDATRPDDYLPWGPEEDFPKGQPAKKIAAVFGGGHTTNWTFDGKGYV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCEE
NENTYAADGDEFPADTVLVLRVTVGDAGYRDPAGNPVPETKLEGKGEAMIFHGGRLVRGT
CCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEC
WKKTGLDAPITLSTKAGELEVPVGHTWIELVPAANGNVTFTK
HHHCCCCCCEEEECCCCEEECCCCCEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]